EY703294

Overview
NameEY703294
Unique NameEY703294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.122e-21
Identity = 57/140 (40.71%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  126 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGKT 545
            QD CVA N P      +G  C+      A DF+   L +PG            A V+Q P +N LGISA R+D  P G  P H HP  SE+  VL+  L  GF++S   +N +    ++KG +FVFPQGL+HFQ+N G T
Sbjct:   29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDT 165          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.122e-21
Identity = 61/149 (40.94%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  111 DPGHLQDVCV---AINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDY-APYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIGKT 545
            DP  +QD CV       P +   +    C+ P    A DF FSG+   GN +   G         Q PGL+TLG+S  R D  A  G  PPH HPRA+E  LVL   +Y GFV S      L A VL +G+V VFP+ ++HFQ N+G T
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATETALVLAGRVYAGFVDS---GGRLFAKVLEQGEVMVFPRAMVHFQLNVGDT 169          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.980e-20
Identity = 57/144 (39.58%), Postives = 72/144 (50.00%), Query Frame = 3
Query:  108 TDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            +D   LQDVC      +  +F+NG FCK P    A DF    L   G+  N +          + PGLNTLGIS  R D A  G   PH HPRASE+  V   ++  GF  +      L    L +GDVF+FP+GL+HF  N G
Sbjct:   23 SDSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDT---KGKLFQKTLAEGDVFIFPRGLVHFIMNYG 163          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.821e-19
Identity = 61/147 (41.50%), Postives = 80/147 (54.42%), Query Frame = 3
Query:  111 DPGHLQDVCVAINDPKD--GVF-VNGKFCKDPKLARAEDFFFSGLGKPGNTANRL-GVDET-DANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNI 536
            DP  L D CVA        G F +NG  C DP LARA+ F  S L +  N A  L G + T  +    +PG N  G++  RID AP G  PPH HPRASE  LVL  ++ VGF  +   +  L   +L  G+ FVFP+ ++HF +N+
Sbjct:   23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAFVFPRAMVHFLYNM 166          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.616e-14
Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  216 DFF-FSGLGKPGNTANRLGVDE---TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            DFF F+G  K  NT++    +    T A + + P LN   +S   + + P    PPH HPR++E+ LV++  L VGF+ +    N L    L  GD+FVFP+G++HFQFN G
Sbjct:   48 DFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSG 156          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.063e-12
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 3
Query:  279 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            T A + + P LN   +S   + Y P    PPH HPR++E+ L+++  L VGFV +    N L    L  GD+FVFP+G++HFQFN G
Sbjct:   73 TKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSG 156          
BLAST of EY703294 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12
Identity = 38/98 (38.78%), Postives = 56/98 (57.14%), Query Frame = 3
Query:  246 GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLERTLYVGFVTSDQLNNTLIAXVLNKGDVFVFPQGLIHFQFNIG 539
            GN+ +   +  T A   + P L    +S   + +      PPHIHPRASE+ +V++  L VG V + + N T+    L  GD+FVFP+G++HFQFN G
Sbjct:   58 GNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNG 154          
The following BLAST results are available for this feature:
BLAST of EY703294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL813_ORYSJ8.122e-2140.71Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GL24_ORYSJ8.122e-2140.94Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]
GL111_ORYSJ8.980e-2039.58Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL31_ORYSJ5.821e-1941.50Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ9.616e-1439.29Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL93_ORYSJ1.063e-1242.53Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL91_ORYSJ2.369e-1238.78Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-018-A02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703294 ID=EY703294; Name=EY703294; organism=Citrus sinensis; type=EST; length=911bp
CCACGCCGTCCGGAAAAGGCACATCCTGTGACTTAATCACCATGAAGGTA
ATTCAATTTCTTATAGGTTTTGCCCTCTTGGCTTTGGCTTCTTCTTTGGC
CTCTGCCACTGACCCTGGCCATCTTCAAGATGTCTGTGTAGCCATCAATG
ACCCCAAGGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAG
CTTGCGAGAGCAGAAGATTTCTTCTTCTCAGGGCTAGGCAAGCCTGGAAA
CACAGCAAATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAA
TTCCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCA
CCATATGGCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCTT
CTTAGTCCTGGAAAGAACTCTNTATGTCGGTTTTGTGACATCAGACCAAC
TGAATAACACACTCATCGCANAAGTTCTAAATAAGGGAGATGTTTTTGTG
TTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATGC
AGCTGCCTATTCTGCTTCTAACAGCCATTCCCGGGTGAAGTTACCATAGC
CGACACAGTCTTTGGAGCCCATCCTTCAATCAATCCCCGATTTTCTTGCC
AAGCCATTCCCAGTTNACCCAAAGAATAGTGAAAGATCTTCAAAATTAGT
TCATTAATGGCAATTTAGGAGAAGGAATTATGACGCTTTATATAAATGGC
CTCTTCCCTAGTGGGTGTATTACTTTATTCCCAAATTTTATATCTAATTA
AATGGATAAAAGAGGTTTTCAATGAACCTTTTTCAGGCTGACTGGGGCCA
TGAAAAAAACATAATGTAATGGGTTTTATTTAAAAAAAAAAAAAAAATAA
AGGGCCGCCGT
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