EY703231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: RBM22_RAT (Pre-mRNA-splicing factor RBM22 OS=Rattus norvegicus GN=Rbm22 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.762e-55 Identity = 127/303 (41.91%), Postives = 167/303 (55.12%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARA--GIHYESSYGKARP-SDTILKLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSD----------------------EVRQQAAIAHSGMLPRS------LISXXXXXXXXXXXXXXXXXXXYFHIPPPPQQDRA----YYPIMDPQRMGA 821 SDVN+EY+ + +R G GKA SD +LKL RT PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL +A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI ++ + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R + + D ++ A A+ LP S I+ + + PPP RA +YP DPQRMGA Sbjct: 110 SDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTVTVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHLFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: RBM22_XENLA (Pre-mRNA-splicing factor RBM22 OS=Xenopus laevis GN=rbm22 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.925e-55 Identity = 122/300 (40.67%), Postives = 161/300 (53.67%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARA--GIHYESSYGKARPS-DTILKLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQR-----PEGESSDEVRQQAAIAHSGMLPRSLISXXXXXXXXXXXXXXXXXXXYFHIPPPP------------------------QQDRAYYPIMDPQRMGA 821 SDVN+EY+ + +R G + GKA S D +LKL RT PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDR+YG+NDPVA KLL +A MP L+PPED+SI TLYVGG+ I+E +LR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R +G ++ + G LP +PPPP +YP DPQRMGA Sbjct: 110 SDVNKEYYTQNMEREIANSDGTRPVGALGKATSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRFYGINDPVADKLLKRASTMPRLDPPEDKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKSFNKLIVNGRRLNVKWGRSQAARGKEREHDGSGDPGMKFEPVPGLPGALPPPPTEEESSANYFNLPPNGSAALVNISLPPPPGLSGPPPGFGPHMFPPMAPPPFLRAPGHIHYPSQDPQRMGA 409
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: RBM22_BOVIN (Pre-mRNA-splicing factor RBM22 OS=Bos taurus GN=RBM22 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.925e-55 Identity = 127/303 (41.91%), Postives = 166/303 (54.79%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARA--GIHYESSYGKARP-SDTILKLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGESSD----------------------EVRQQAAIAHSGMLPRS------LISXXXXXXXXXXXXXXXXXXXYFHIPPPPQQDRA----YYPIMDPQRMGA 821 SDVN+EY+ + +R G GKA SD +LKL RT PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL +A MP L+PPED++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NK ++ G RL + WG+ Q R + + D ++ A A+ LP S I+ + + PPP RA +YP DPQRMGA Sbjct: 110 SDVNKEYYTQNMEREISNSDGTRPVGMLGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKFIVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHPMGPPPPFMRAPGPIHYPSQDPQRMGA 412
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: RBM22_CHICK (Pre-mRNA-splicing factor RBM22 OS=Gallus gallus GN=RBM22 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 5.126e-55 Identity = 125/303 (41.25%), Postives = 166/303 (54.79%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARA--GIHYESSYGKARP-SDTILKLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQR-----PEGESSDEVRQQAAIAHSGMLPRS-----------------------LISXXXXXXXXXXXXXXXXXXXYFHIPPPPQQDRA----YYPIMDPQRMGA 821 SDVN+EY+ + +R G + GKA SD +LKL RT PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ Q+IKDRYYG+NDPVA KLL +A MP L+PP+D++I TLYVGG+ ITE DLR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL++ G RL + WG+ Q R EG + ++ + G LP I+ + + PPP RA +YP DPQRMGA Sbjct: 110 SDVNKEYYTQNMEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQDIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLGDTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAVVNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGA 412
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: RBM22_DANRE (Pre-mRNA-splicing factor RBM22 OS=Danio rerio GN=rbm22 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.544e-54 Identity = 123/308 (39.94%), Postives = 164/308 (53.25%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARA--GIHYESSYGKA-RPSDTILKLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGE--LSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGKPQTQRPEGE----SSDEVRQQAAIAHSGMLPRSLISXXXXXXXXXXXXXXXXXXXY-FHIPPPP--------------------------------QQDRAYYPIMDPQRMGA 821 SDVN+EY+ + +R G GKA SD +LKL RT PYYKRNR H+CSF+V+GEC RG ECPYRHE P + L+ QNIKDRYYG+NDPVA KLL +A MP L+ P+D+SI TLY+GG+ +T+ +LR++FY GEI +I + ++ AF+ + TR+ AE AAE+ NKL+I G RL + WG+ Q R +GE + +R + G LP +S +PPPP + +YP DPQRMGA Sbjct: 110 SDVNKEYYTQNMEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRYYGINDPVANKLLMRASTMPRLDVPDDKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNVKWGRSQAARGKGEKDGVTESGIRLEPVPGLPGALPPPPVSDEDASTNYFNLAPTPSPAVMNLGLPPPPGVTMPPPPGFGPPMFHTMDPMAPPVPPPMALRPPGQVHYPSQDPQRMGA 417
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: SLT11_CRYNE (Pre-mRNA-splicing factor SLT11 OS=Cryptococcus neoformans GN=SLT11 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 2.025e-35 Identity = 85/225 (37.78%), Postives = 132/225 (58.67%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARA---GIHYESSYGKARPSDTILKLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRHEMPVTGEL---SQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDN------FYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNK--LVIKGLRLKLMWGKPQTQRPEGESSDEVRQQAAIA 656 SD+N++Y+ + + + G+ Y+S + + L RT PYYKRNR H+CSF+V+GEC RGAECP+RHEMP E SQQ++ DRYYG NDPVA K+L++ E L+ PED+SI TL G+ + + +R + F +++SI + AFV + R AE+AA+ L+ + + ++G + K++WG+ RP+ +++ V AA A Sbjct: 106 SDINKQYYIQNLEAQMAESPDGLAYDSEVANRAGREMLKNLARTDPYYKRNRPHICSFFVKGECKRGAECPFRHEMPKENETQKPSQQSLVDRYYGRNDPVAKKILSQNAESKGLKAPEDKSITTLLFLGL-PQCNDSHVRASLVGACPFVKPSDVKSISIVEASHCAFVNFNQRSMAERAADALAAQGGIEVEGKKAKIVWGR---ARPQKKAAAAVEGSAAPA 326
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: RBM22_PLAF7 (Pre-mRNA-splicing factor PFL2310w OS=Plasmodium falciparum (isolate 3D7) GN=PFL2310w PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 6.112e-24 Identity = 63/187 (33.69%), Postives = 111/187 (59.36%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARAGIHYESSYGKA-RPSDTILKLQRTQPYYKRNRAHVCSFYVRGECTRGAECPYRH-EMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKT-LYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRL 575 ++ NR +F E+ + S+Y K R + + KL+R PY+KRN A VCSF+ + C RG ECPY H E+ + LS QNIK+RY G ND +A K+L K E + +D+++ + + G+ +++ ++++ F G+I+SIK+ P+ + F++Y+ + A+KA+++ + L++ G L Sbjct: 112 NETNRNFFLEQMEN------DMSSTYDKMNRINMDLSKLKRRDPYFKRNMARVCSFWRKNSCNRGDECPYLHKEIHLDKSLSNQNIKNRYTGENDILAEKILLKHNEKNN----DDKNMSNKICIQGISESVSQANIKECFKKFGDIKSIKVIPKDSKMFISYSNSQAAKKASDKYKDGLLLNGCNL 288
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: SLT11_USTMA (Pre-mRNA-splicing factor SLT11 OS=Ustilago maydis GN=SLT11 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 2.328e-15 Identity = 59/220 (26.82%), Postives = 99/220 (45.00%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARAGIHYESSYGKARPSDTILKLQRTQPYYKRNRA----HVCSFYVRGECTRGAECPYRHEMPVTGEL----SQQNIKDRYYGVND----PVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAH-------GEIESIKMHPQKAFAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWG--KPQTQRPEGE 620 SD + YFA+ +++ A + S G+ + + K R + YKR+R +CS + RG C RG CP++H++P +L NI Y + K+L + L PP D S+++L++ + E+ F+ +I+SI + AFV + TR+ AE AA K+ + ++LMWG +P + E E Sbjct: 102 SDKAKAYFADTMEKQLEATVGSSSRAGQ----ELVRKAARREIDYKRDRPVQSQKLCSAFARGRCERGDSCPFKHQLPTDDQLPGLQPSSNINYPYSPTSSSPSKQAVAKILTSSTSSVGLPPPSDASVRSLFISNLPPEHLEEPSIRQFFLDLAPPLQAQDIKSITLVRASNCAFVNFATRDHAELAARRCEPKMRLGDKEIRLMWGRSRPVKRNEENE 317
BLAST of EY703231 vs. ExPASy Swiss-Prot
Match: SLT11_SCHPO (Pre-mRNA-splicing factor slt11 OS=Schizosaccharomyces pombe GN=cwf5 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.340e-13 Identity = 59/205 (28.78%), Postives = 102/205 (49.76%), Query Frame = 3 Query: 24 SDVNREYFAEEHDRRARAG-IHYESSYGKARPSDTILKLQRTQPYY---KRNRAHVCSFYVRGECTRGAECPYRHEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGVDARITEQDLRDNFYAHGEIESIKMHPQKAFAFVTYTTREGAE-KAAEELSNKLVIKGLRLKLMWGKPQT-QRPEGE 620 +D+NRE+FA+ R G Y+S A + + K+++ + + KR V S + E R ++ E P+ + I +N V+L + ++EPP+D+ I +L++ GV+ + + +R +F +G ++S+ + AFV + TR AE AA +VI+G RLK+ WGKP++ PEGE Sbjct: 109 NDINREFFAQNQQRLLSNGETAYDSQEASAAARNLVKKVEKRELHSRPPKRKLDDVESKQILKEA-RASDASLNAERPL---FPVKKI------INGNVSLSI--------NMEPPKDKKIASLFLIGVEDELADYKIRKHFEQYGPLKSVVCSHRAKCAFVNFKTRSSAEIAAAASPDGNVVIEGFRLKVQWGKPRSLGGPEGE 295 The following BLAST results are available for this feature:
BLAST of EY703231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703231 ID=EY703231; Name=EY703231; organism=Citrus sinensis; type=EST; length=928bpback to top |