EY703225

Overview
NameEY703225
Unique NameEY703225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_LACSA (Glutamine synthetase OS=Lactuca sativa PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 49/61 (80.33%), Postives = 56/61 (91.80%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 188
            R ETA I++F WGVANRG SIRVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETTILW+
Sbjct:  295 RHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWD 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_SOYBN (Glutamine synthetase cytosolic isozyme 2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            R ETA +++F WGVANRG SIRVGR+TEK GKGY EDRRPASNMDPYVVTS++AETTILW+P
Sbjct:  295 RHETADMNTFVWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA1_PHAVU (Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 49/62 (79.03%), Postives = 56/62 (90.32%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            R ETA I++F WGVANRG SIRVGR+TEK GKGY EDRRPASNMDPYVVTS++A+TTILW+P
Sbjct:  295 RHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIADTTILWKP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLN12_ARATH (Glutamine synthetase cytosolic isozyme 1-2 OS=Arabidopsis thaliana GN=GLN1-2 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.850e-23
Identity = 48/60 (80.00%), Postives = 55/60 (91.67%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            ETA I++F WGVANRG SIRVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETT+LW P
Sbjct:  297 ETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLLWNP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.947e-23
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEPT 194
            R ETA I++F WGV NRG S+RVGR+TEK+GKGY EDRRPASNMDPYVVT L+AETT+LWEP+
Sbjct:  294 RHETADINTFVWGVPNRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTCLIAETTMLWEPS 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA1_SOYBN (Glutamine synthetase cytosolic isozyme 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.947e-23
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            R ETA I++F WGVANRG S+RVGR+TEK GKGY EDRRPASNMDPYVVTS++A+TTILW+P
Sbjct:  294 RHETADINTFLWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIADTTILWKP 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA3_MEDSA (Glutamine synthetase nodule isozyme OS=Medicago sativa GN=GS1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.526e-22
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            ET  I++FSWGVANRG S+RVGR+TEK GKGY EDRRP+SNMDPYVVTS++AETT+LW+P
Sbjct:  297 ETTDINTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPSSNMDPYVVTSMIAETTLLWKP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA1_MEDSA (Glutamine synthetase cytosolic isozyme OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.526e-22
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            R ETA I++F WGVANRG SIRVGR+TEK GKGY EDRRP+SNMDPYVVTS++A+TTILW+P
Sbjct:  295 RHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPSSNMDPYVVTSMIADTTILWKP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA4_PEA (Glutamine synthetase root isozyme B OS=Pisum sativum GN=GS3B PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.993e-22
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 188
            ETA I+ FSWGVANRG SIRVGR+TEK GKGY EDRRPASNMDPYVVTS++AETTILW+
Sbjct:  297 ETADINVFSWGVANRGSSIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWK 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA3_PEA (Glutamine synthetase root isozyme A OS=Pisum sativum GN=GS3A PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.993e-22
Identity = 49/59 (83.05%), Postives = 54/59 (91.53%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 188
            ETA I+ FSWGVANRG SIRVGR+TEK GKGY EDRRPASNMDPYVVTS++AETTILW+
Sbjct:  297 ETADINVFSWGVANRGSSIRVGRDTEKDGKGYFEDRRPASNMDPYVVTSMIAETTILWK 355          
The following BLAST results are available for this feature:
BLAST of EY703225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GLNA_LACSA6.850e-2380.33Glutamine synthetase OS=Lactuca sativa PE=2 SV=2[more]
GLNA2_SOYBN6.850e-2379.03Glutamine synthetase cytosolic isozyme 2 OS=Glycin... [more]
GLNA1_PHAVU6.850e-2379.03Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE... [more]
GLN12_ARATH6.850e-2380.00Glutamine synthetase cytosolic isozyme 1-2 OS=Arab... [more]
GLNA2_MAIZE8.947e-2376.19Glutamine synthetase root isozyme 2 OS=Zea mays GN... [more]
GLNA1_SOYBN8.947e-2377.42Glutamine synthetase cytosolic isozyme 1 OS=Glycin... [more]
GLNA3_MEDSA1.526e-2276.67Glutamine synthetase nodule isozyme OS=Medicago sa... [more]
GLNA1_MEDSA1.526e-2277.42Glutamine synthetase cytosolic isozyme OS=Medicago... [more]
GLNA4_PEA1.993e-2283.05Glutamine synthetase root isozyme B OS=Pisum sativ... [more]
GLNA3_PEA1.993e-2283.05Glutamine synthetase root isozyme A OS=Pisum sativ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-C04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703225 ID=EY703225; Name=EY703225; organism=Citrus sinensis; type=EST; length=790bp
CCACGCGTCCGGAAACAGCTAGCATTGACTCATTTTCTTGGGGTGTGGCA
AATCGTGGTTGCTCAATCCGTGTGGGACGTGAAACTGAGAAGCAAGGCAA
AGGTTACTTGGAAGATAGGCGTCCAGCTTCAAACATGGACCCTTATGTAG
TGACCTCGTTACTGGCTGAAACTACAATATTGTGGGAACCCACACTTGAG
GCTGAAGCGCTAGCTGCTCAGAAGTTGGCATTGAATGTCTGAAGTTGATT
ATAGATCAACTGAAGAACTTGAGAAGCAGTCTCTTGGATTTAAATTGCCC
GTGCTTGGGGGAATACTTTTCCCTTTCCTTTTTAGTTCTTTAGGGAAGAA
CCTTGTAAATAAAAGGTCCCGAAGTTAATGTTCATGCCCAAGTTAATCGA
TCCTCAGATTGAAGATATATCCTTCAGATCAGATCAGTTCATAGTTGGTT
TCAGGTTTACGCATGTTTTACATGGATGCTTGGACCATTATTGTTCTTTT
GGACCATATCTTGAATGGCTTTTTATACCAGTTCATCAATGCTATCGCGT
GTTTTTTAGCCATAAAAGGAAAAAGTGTTGAGTAGAAAATTCTGAAGCTG
ACTTTTTTCTTCTGAAACATGTTTTGGTCAGAAGATGCTACATGTAGTGA
TTGTGTCCTAAGCTTTTTTATTTTGGCTTTTCCTTTTTTACTTTAACCTG
CCAAGAATGCAGAAAGAAATGGACTTNCCGGNNAATGGGGGTTTCGCCAA
AAGCAAATTCTGTCCCGTTACTGAAAAAAAAAAAAAGGGG
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