EY703225

Overview
NameEY703225
Unique NameEY703225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA3_PHAVU (Glutamine synthetase N-1 OS=Phaseolus vulgaris GN=Gln-gamma PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            ETA +++F WGVANRG SIRVGR+TEK GKGY EDRRPASNMDPYVVTS++AETT+LW+P
Sbjct:  297 ETADMNTFIWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTLLWKP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA1_PEA (Glutamine synthetase nodule isozyme OS=Pisum sativum GN=GS1 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22
Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            ETA I++FSWGVANRG S+RVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETTIL +P
Sbjct:  296 ETADINTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILLKP 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLN12_ORYSJ (Glutamine synthetase cytosolic isozyme 1-2 OS=Oryza sativa subsp. japonica GN=GLN1-2 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.603e-22
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 188
            R ETA I++F WGVANRG SIRVGR+TEK+GKGY EDRRPASNMDPYVVT ++AETT+LW+
Sbjct:  295 RHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLWK 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA5_MAIZE (Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWE 188
            R ETA I++F WGVANRG SIRVGR+TEK+GKGY EDRRPASNMDPYVVT ++A+TTILW+
Sbjct:  295 RHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIADTTILWK 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA3_HORVU (Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22
Identity = 47/60 (78.33%), Postives = 55/60 (91.67%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            ETA I++ SWGVANRG S+RVGRETE+ GKGY EDRRPASNMDPYVVTS++A+TTILW+P
Sbjct:  297 ETADINTSSWGVANRGASVRVGRETEQNGKGYFEDRRPASNMDPYVVTSMIAQTTILWKP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA1_MAIZE (Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.440e-22
Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILW 185
            R ETA I++F WGVANRG SIRVGR+TE++GKGY EDRRPASNMDPYVVT ++AETTILW
Sbjct:  295 RHETADINTFKWGVANRGASIRVGRDTEREGKGYFEDRRPASNMDPYVVTGMIAETTILW 354          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLN13_ARATH (Glutamine synthetase cytosolic isozyme 1-3 OS=Arabidopsis thaliana GN=GLN1-3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.292e-21
Identity = 47/57 (82.46%), Postives = 54/57 (94.74%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 182
            ETA I++FSWGVANRG S+RVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETTIL
Sbjct:  297 ETADINTFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 353          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLN14_ARATH (Glutamine synthetase cytosolic isozyme 1-4 OS=Arabidopsis thaliana GN=GLN1-4 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.687e-21
Identity = 46/60 (76.67%), Postives = 54/60 (90.00%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTILWEP 191
            ETA I++F WGVANRG SIRVGR+TE+ GKGY EDRRPASNMDPY VTS++AE+TILW+P
Sbjct:  297 ETADINTFLWGVANRGASIRVGRDTEQAGKGYFEDRRPASNMDPYTVTSMIAESTILWKP 356          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.878e-21
Identity = 47/57 (82.46%), Postives = 53/57 (92.98%), Query Frame = 3
Query:   12 ETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 182
            ETASI  FSWGVANRG S+RVGR+TEK+GKGY EDRRPASNM+PYVVTS++AETTIL
Sbjct:  296 ETASIHKFSWGVANRGASVRVGRDTEKEGKGYFEDRRPASNMEPYVVTSMIAETTIL 352          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_LUPLU (Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.909e-21
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 182
            R ETA I +F WGVANRG SIRVGR+TEK+GKGY EDRRPASNMDPYVVTS++AETT+L
Sbjct:  295 RHETADISTFFWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLL 353          
The following BLAST results are available for this feature:
BLAST of EY703225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GLNA3_PHAVU2.603e-2278.33Glutamine synthetase N-1 OS=Phaseolus vulgaris GN=... [more]
GLNA1_PEA2.603e-2280.00Glutamine synthetase nodule isozyme OS=Pisum sativ... [more]
GLN12_ORYSJ2.603e-2277.05Glutamine synthetase cytosolic isozyme 1-2 OS=Oryz... [more]
GLNA5_MAIZE3.400e-2277.05Glutamine synthetase root isozyme 5 OS=Zea mays GN... [more]
GLNA3_HORVU3.400e-2278.33Glutamine synthetase OS=Hordeum vulgare PE=2 SV=1[more]
GLNA1_MAIZE4.440e-2278.33Glutamine synthetase root isozyme 1 OS=Zea mays GN... [more]
GLN13_ARATH1.292e-2182.46Glutamine synthetase cytosolic isozyme 1-3 OS=Arab... [more]
GLN14_ARATH1.687e-2176.67Glutamine synthetase cytosolic isozyme 1-4 OS=Arab... [more]
GLNA1_DAUCA2.878e-2182.46Glutamine synthetase cytosolic isozyme OS=Daucus c... [more]
GLNA_LUPLU4.909e-2179.66Glutamine synthetase nodule isozyme OS=Lupinus lut... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-C04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703225 ID=EY703225; Name=EY703225; organism=Citrus sinensis; type=EST; length=790bp
CCACGCGTCCGGAAACAGCTAGCATTGACTCATTTTCTTGGGGTGTGGCA
AATCGTGGTTGCTCAATCCGTGTGGGACGTGAAACTGAGAAGCAAGGCAA
AGGTTACTTGGAAGATAGGCGTCCAGCTTCAAACATGGACCCTTATGTAG
TGACCTCGTTACTGGCTGAAACTACAATATTGTGGGAACCCACACTTGAG
GCTGAAGCGCTAGCTGCTCAGAAGTTGGCATTGAATGTCTGAAGTTGATT
ATAGATCAACTGAAGAACTTGAGAAGCAGTCTCTTGGATTTAAATTGCCC
GTGCTTGGGGGAATACTTTTCCCTTTCCTTTTTAGTTCTTTAGGGAAGAA
CCTTGTAAATAAAAGGTCCCGAAGTTAATGTTCATGCCCAAGTTAATCGA
TCCTCAGATTGAAGATATATCCTTCAGATCAGATCAGTTCATAGTTGGTT
TCAGGTTTACGCATGTTTTACATGGATGCTTGGACCATTATTGTTCTTTT
GGACCATATCTTGAATGGCTTTTTATACCAGTTCATCAATGCTATCGCGT
GTTTTTTAGCCATAAAAGGAAAAAGTGTTGAGTAGAAAATTCTGAAGCTG
ACTTTTTTCTTCTGAAACATGTTTTGGTCAGAAGATGCTACATGTAGTGA
TTGTGTCCTAAGCTTTTTTATTTTGGCTTTTCCTTTTTTACTTTAACCTG
CCAAGAATGCAGAAAGAAATGGACTTNCCGGNNAATGGGGGTTTCGCCAA
AAGCAAATTCTGTCCCGTTACTGAAAAAAAAAAAAAGGGG
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