EY703225

Overview
NameEY703225
Unique NameEY703225
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_HEBCY (Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 182
            R ET  I +FS GVANRG SIRV R    QG GYLEDRRPASN+DPY VTS++ ETT+L
Sbjct:  294 RHETGHIGAFSSGVANRGASIRVPRHVAAQGYGYLEDRRPASNIDPYRVTSIIVETTLL 352          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_FUSSH (Glutamine synthetase OS=Fusarium solani subsp. phaseoli GN=GLN1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTI 179
            R ET SIDSFSWGVANRG SIR  RET  +G GY EDRRPASN DPY VT  L + ++
Sbjct:  298 RHETGSIDSFSWGVANRGTSIRAPRETAAKGYGYFEDRRPASNADPYRVTKALLQFSL 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_EMENI (Glutamine synthetase OS=Emericella nidulans GN=glnA PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.408e-14
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAET 173
            R ET +ID FS+GVA+RG SIR+ R+  K GKGY EDRRPASN DPY +T ++AET
Sbjct:  284 RHETGNIDKFSYGVADRGGSIRIPRQVAKDGKGYFEDRRPASNADPYQITGIIAET 339          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_DEBHA (Glutamine synthetase OS=Debaryomyces hansenii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.408e-14
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAET 173
            R ETASI+ FS GVANRG S+R+ R   K+G GY EDRRPASN+DPY+VT ++ ET
Sbjct:  295 RHETASIEGFSSGVANRGASVRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMVET 350          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.451e-14
Identity = 39/59 (66.10%), Postives = 43/59 (72.88%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 182
            R ET  I  FS GVANRG SIRV R    QG GYLEDRRPASN+DPY VT ++ ETT+L
Sbjct:  294 RHETGHIGDFSSGVANRGASIRVPRHVAAQGYGYLEDRRPASNIDPYRVTGIIVETTVL 352          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.813e-14
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAET 173
            R ETAS+ +FS GVANRG SIR+ R   K+G GY EDRRPASN+DPY+VT ++ ET
Sbjct:  298 RHETASMSTFSSGVANRGASIRIPRSVNKEGYGYFEDRRPASNIDPYLVTGIMCET 353          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_CANGA (Glutamine synthetase OS=Candida glabrata GN=GLN1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.591e-14
Identity = 37/56 (66.07%), Postives = 44/56 (78.57%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAET 173
            R ETAS+ SFS GVANRG SIR+ R   K+G GY EDRRPASN+DPY+VT ++ ET
Sbjct:  296 RHETASMTSFSSGVANRGASIRIPRPVAKEGFGYFEDRRPASNIDPYLVTGIMCET 351          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_AMAMU (Glutamine synthetase OS=Amanita muscaria GN=GLN1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.591e-14
Identity = 39/59 (66.10%), Postives = 44/59 (74.58%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAETTIL 182
            R ET  I +FS GVANRG SIRV R    +G GYLEDRRPASN+DPY VT ++ ETTIL
Sbjct:  294 RHETGHIGTFSSGVANRGASIRVPRHVANKGYGYLEDRRPASNIDPYRVTGIIIETTIL 352          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_NEUCR (Glutamine synthetase OS=Neurospora crassa GN=gln-1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.915e-14
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAET 173
            R ET SIDSF++GVANRG SIR+ RE   +G GY EDRRPASN DPY +T ++ ET
Sbjct:  300 RHETGSIDSFTYGVANRGASIRIPRECGAKGYGYFEDRRPASNADPYQITGIIMET 355          
BLAST of EY703225 vs. ExPASy Swiss-Prot
Match: GLNA_YEAST (Glutamine synthetase OS=Saccharomyces cerevisiae GN=GLN1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.295e-13
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 3
Query:    6 RPETASIDSFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYVVTSLLAET 173
            R ETAS+ +FS GVANRG SIR+ R   K+G GY EDRRPASN+DPY+VT ++ ET
Sbjct:  296 RHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCET 351          
The following BLAST results are available for this feature:
BLAST of EY703225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GLNA_HEBCY1.530e-1467.80Glutamine synthetase OS=Hebeloma cylindrosporum GN... [more]
GLNA_FUSSH1.530e-1467.24Glutamine synthetase OS=Fusarium solani subsp. pha... [more]
GLNA_EMENI3.408e-1464.29Glutamine synthetase OS=Emericella nidulans GN=gln... [more]
GLNA_DEBHA3.408e-1464.29Glutamine synthetase OS=Debaryomyces hansenii GN=G... [more]
GLNA_SUIBO4.451e-1466.10Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]
GLNA_KLULA5.813e-1464.29Glutamine synthetase OS=Kluyveromyces lactis GN=GL... [more]
GLNA_CANGA7.591e-1466.07Glutamine synthetase OS=Candida glabrata GN=GLN1 P... [more]
GLNA_AMAMU7.591e-1466.10Glutamine synthetase OS=Amanita muscaria GN=GLN1 P... [more]
GLNA_NEUCR9.915e-1464.29Glutamine synthetase OS=Neurospora crassa GN=gln-1... [more]
GLNA_YEAST1.295e-1364.29Glutamine synthetase OS=Saccharomyces cerevisiae G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-C04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703225 ID=EY703225; Name=EY703225; organism=Citrus sinensis; type=EST; length=790bp
CCACGCGTCCGGAAACAGCTAGCATTGACTCATTTTCTTGGGGTGTGGCA
AATCGTGGTTGCTCAATCCGTGTGGGACGTGAAACTGAGAAGCAAGGCAA
AGGTTACTTGGAAGATAGGCGTCCAGCTTCAAACATGGACCCTTATGTAG
TGACCTCGTTACTGGCTGAAACTACAATATTGTGGGAACCCACACTTGAG
GCTGAAGCGCTAGCTGCTCAGAAGTTGGCATTGAATGTCTGAAGTTGATT
ATAGATCAACTGAAGAACTTGAGAAGCAGTCTCTTGGATTTAAATTGCCC
GTGCTTGGGGGAATACTTTTCCCTTTCCTTTTTAGTTCTTTAGGGAAGAA
CCTTGTAAATAAAAGGTCCCGAAGTTAATGTTCATGCCCAAGTTAATCGA
TCCTCAGATTGAAGATATATCCTTCAGATCAGATCAGTTCATAGTTGGTT
TCAGGTTTACGCATGTTTTACATGGATGCTTGGACCATTATTGTTCTTTT
GGACCATATCTTGAATGGCTTTTTATACCAGTTCATCAATGCTATCGCGT
GTTTTTTAGCCATAAAAGGAAAAAGTGTTGAGTAGAAAATTCTGAAGCTG
ACTTTTTTCTTCTGAAACATGTTTTGGTCAGAAGATGCTACATGTAGTGA
TTGTGTCCTAAGCTTTTTTATTTTGGCTTTTCCTTTTTTACTTTAACCTG
CCAAGAATGCAGAAAGAAATGGACTTNCCGGNNAATGGGGGTTTCGCCAA
AAGCAAATTCTGTCCCGTTACTGAAAAAAAAAAAAAGGGG
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