EY703217

Overview
NameEY703217
Unique NameEY703217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 2.268e-47
Identity = 102/253 (40.32%), Postives = 149/253 (58.89%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE--------------MMKNGMAQDLSWKGPAKKWEETLL 749
            ++GIVNG+D +EWNP  D ++     + Y   T+   KP  K ALQ E+GLPV  ++P+IGFIGRL+ QKG D++A A+P  + ++VQ+++LGTG++ +E+ L Q E  + +K RG   F++  +H I AGAD +L+PSRFEPCGL QL+AM+YGT+P+V + GGL DTV                +  DP + + +  T  RA A+    AL                +    M QDLSW   A+ +EE L+
Sbjct:  525 LQGIVNGIDTKEWNPELDVHLQSDGYMNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRRDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTV----------------QPFDPFNESGLGWTFSRAEASQLIHALGNCLLTYREYKKSWEGIQTRCMTQDLSWDNAAQNYEEVLI 761          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 8.617e-47
Identity = 103/250 (41.20%), Postives = 151/250 (60.40%), Query Frame = 3
Query:   24 NIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 749
            NII ++  K  GIVNG+D ++WNP  D Y+       Y+  T+   K   K ALQ E+GLPV  ++P+I FIGRL+ QKG D++A AIP  +  +VQ+++LGTG+  +E+ L++ E  + +K R    F++ +AH I AG+D +L+PSRFEPCGL QL+AM YGTVP+V   GGL DTV+  F  F            D  +   +   +   L TY    ++   + + GM+QDLSW   A+++EE L+
Sbjct:  501 NIINESDWKFRGIVNGVDTKDWNPQFDAYLTSDGYTNYNLKTLQTGKRQCKAALQRELGLPVREDVPIISFIGRLDHQKGVDLIAEAIPWMMSHDVQLVMLGTGRADLEQMLKEFEAQHCDKIRSWVGFSVKMAHRITAGSDILLMPSRFEPCGLNQLYAMSYGTVPVVHGVGGLRDTVQP-FNPFDESGVG---WTFDRAEANKLMAALWNCLLTYKDYKKSWEGIQERGMSQDLSWDNAAQQYEEVLV 746          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.470e-46
Identity = 107/240 (44.58%), Postives = 143/240 (59.58%), Query Frame = 3
Query:   48 KGIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 749
            +GIVNG+D  +WNP  D ++       Y   TV   K   K ALQ E+GLPV  ++PVI FIGRL+ QKG D++A A+P    ++VQ+I+LGTG++ +E  L +LE  + ++ RG   F+I LAH + AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTVE    +    +G      EA   +D         R   T    +   + K GM QDLSW   AK +EE LL
Sbjct:  508 QGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRT----SWEGLQKRGMMQDLSWDNAAKLYEEVLL 743          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.729e-45
Identity = 103/243 (42.39%), Postives = 148/243 (60.91%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKWEETLL 749
            ++GIVNG+D+ EWNP  D+++       Y   T+   K   KEALQ ++GL V  ++P+IGFIGRL+ QKG DI+  A+P    ++VQ+++LGTG+  +E+ L + E  + +K RG   F++ LAH I AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTV   + F    +G      EA   +D       +   L TY    ++   +   GMAQDLSW   A+ +E+ L+
Sbjct:  452 LQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVAPFDPFADTGLGWTFDRAEANRMID------ALGHCLNTYRNYKESWRGLQARGMAQDLSWDHAAELYEDVLV 688          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.065e-44
Identity = 102/250 (40.80%), Postives = 151/250 (60.40%), Query Frame = 3
Query:   24 NIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 749
            +IIR+   K  GIVNG+D +EWNP  D ++       Y  +++   KP  K ALQ E+GL V  ++P+IGFIGRL+ QKG DI+  A+P    ++VQ+++LG+G++ +E  L++ E  +  K RG   F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DTV   F  F+        +  +P     +   +   L TY    ++   +   GM+QDLSW   A+ +EE L+
Sbjct:  559 DIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSGKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTV-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSJ (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-3 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.228e-44
Identity = 101/250 (40.40%), Postives = 152/250 (60.80%), Query Frame = 3
Query:   24 NIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLL 749
            +IIR+   K  GIVNG+D +EWNP  D ++       Y  +++  +KP  K ALQ E+GL V  ++P+IGFIGRL+ QKG DI+  A+P    ++VQ+++LG+G++ +E  L++ E  +  K RG   F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DT+   F  F+        +  +P     +   +   L TY    ++   +   GM+QDLSW   A+ +EE L+
Sbjct:  559 DIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSSKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTM-SAFDPFEDTGLGWTFDRAEP---HKLIEALGHCLETYRKYKESWRGLQVRGMSQDLSWDHAAELYEEVLV 804          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_THEYD (Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.780e-43
Identity = 98/237 (41.35%), Postives = 133/237 (56.12%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQDLSWKGPAKKWEE 740
            RK  + GI+NG+D + WNP  D +I  KY    + D K   KE L A  G+      P+I FIGR+  QKG DI+  A+P+ IK  +  I  GTG+   E ++ +L+  YP K      F+  LAH I AGAD +L+PSR+EPCGL QL AMRYGT+PI   TGGL DTVE+  TGF    +S           +A++  + R +  Y   Q   EM++  M +D SW   +KK+ E
Sbjct:  256 RKENLVGIINGIDYKIWNPEEDPFIAKKYGLQNIND-KQKNKEDLIALAGINSSLQDPIIAFIGRMVYQKGIDIVVDAMPNLIKNGISFIFEGTGESYYEHKIRELQNSYPSKVFAFIGFDEALAHKIYAGADSLLVPSRYEPCGLSQLIAMRYGTIPICRKTGGLSDTVEDKVTGFLFSEYS----------SSALTHAISRFIEIYNNKQKFLEMIREAMKRDFSWSNSSKKYIE 481          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA2_NITOC (Glycogen synthase 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.860e-43
Identity = 102/253 (40.32%), Postives = 141/253 (55.73%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLES 761
            R   + GI+NG D Q W+P  D +I  +YD  T    K   K ALQ   GLP D  +PV+GF+GRL EQKG D++  A+P  + E +Q++ LG G++  +  L+QL   YP +      ++  LAH + AGAD  L+PSRFEPCGL QL+A+RYGTVPI   TGGL DT+         +E  TGF     S           +A+ T ++RALA Y  ++    +   GMAQ+ SW+  AK + +    L S
Sbjct:  240 RSKRLTGILNGADYQRWDPRHDPFIEKRYD-QTCWSHKASNKLALQRRYGLPEDDTLPVLGFVGRLVEQKGIDLILGALPKLLAEKIQVVFLGEGEERHQNALQQLASRYPNQIGVSISYDERLAHGVQAGADIFLMPSRFEPCGLTQLYALRYGTVPIARRTGGLSDTIVDATEKNLRQELATGFTFTESS----------PSALLTAIQRALACYAQSRQWRRLALTGMAQNFSWQTSAKAYFDLYQQLVS 481          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.682e-42
Identity = 95/236 (40.25%), Postives = 144/236 (61.02%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 737
            R   + GI+NG+DV+EW+P TD+++  +Y A+  +  K   K ALQ E+GLP   ++P++  IGRL EQKG D++ AA+   +  ++Q+++LGTG+  +E+   +     P++      F+  LAH + AGAD  L+PSRFEPCGL Q++++RYGT+P+V + GGL DTVE+ F G+  G+         P    A+   VRRAL  +   +A   MM  GMA D SW   A+ +E
Sbjct:  237 RARDLHGILNGIDVEEWDPATDRHLPARYSAAD-LSGKAACKSALQRELGLPERPDVPLVAMIGRLAEQKGLDLVVAALGELLARDLQLVLLGTGRPELEEAFRRAARERPDRMAARIGFDEGLAHRMEAGADLFLMPSRFEPCGLNQMYSLRYGTIPVVRAVGGLEDTVED-FDGWSRGT-GFKFRDYHP---QAMLLAVRRALEAHRDRRAWRAMMLRGMALDFSWDRSAQAYE 466          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.869e-42
Identity = 97/236 (41.10%), Postives = 141/236 (59.75%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 737
            R   + GI+NG+DV  W+P  D ++   + A   +  K   K ALQ EVGLPV   +PV G + RL EQKG D++AAA+P  +  +VQ+++LG+G    E+   +    +P++      F+  LAH I AGAD  L+PSRFEPCGL Q++++RYGTVP+V + GGL DTVE+ F GF  G+     E        A+ T  RRAL  +   +A   +++ GMA+D SW+  A ++E
Sbjct:  238 RARDLHGILNGIDVHAWDPARDPHLPAHFGAGD-LTGKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDAAYEQAFARAAREHPDRVAARIGFDEGLAHRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVED-FDGFARGTGFRFSEYTP----QALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467          
The following BLAST results are available for this feature:
BLAST of EY703217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
SSY2_SOLTU2.268e-4740.32Granule-bound starch synthase 2, chloroplastic/amy... [more]
SSG2_PEA8.617e-4741.20Granule-bound starch synthase 2, chloroplastic/amy... [more]
SSY21_ORYSJ1.470e-4644.58Soluble starch synthase 2-1, chloroplastic/amylopl... [more]
SSY22_ORYSJ4.729e-4542.39Soluble starch synthase 2-2, chloroplastic/amylopl... [more]
SSY23_ORYSI3.065e-4440.80Soluble starch synthase 2-3, chloroplastic/amylopl... [more]
SSY23_ORYSJ5.228e-4440.40Soluble starch synthase 2-3, chloroplastic/amylopl... [more]
GLGA_THEYD5.780e-4341.35Glycogen synthase OS=Thermodesulfovibrio yellowsto... [more]
GLGA2_NITOC9.860e-4340.32Glycogen synthase 2 OS=Nitrosococcus oceani (strai... [more]
GLGA_ANADF1.682e-4240.25Glycogen synthase OS=Anaeromyxobacter sp. (strain ... [more]
GLGA_ANAD22.869e-4241.10Glycogen synthase OS=Anaeromyxobacter dehalogenans... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703217 ID=EY703217; Name=EY703217; organism=Citrus sinensis; type=EST; length=913bp
TGTCTCGACCCACGCGTCCGGATAATATCATTCGCAAAACTGGCATTAAG
GGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGACAA
ATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCCTC
TTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAAT
ATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGA
TATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAA
TAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTG
GAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCC
TCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCA
GATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACC
GTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGG
CTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGG
ATCCAGTAGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCA
ACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCA
AGATCTTTCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTA
ACCTGGAAAGTGCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCT
CCTCTTGCCAAAGGAAATGTGGCCACTCCTTGATCGANGCTACAAAATCT
CCACTTTTATTTTGGGACCGCAACATGTTCCTGTAATTCTCCACAACCCC
AGATATTACTTAG
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