EY703217

Overview
NameEY703217
Unique NameEY703217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP3 (Glycogen synthase OS=Klebsiella pneumoniae (strain 342) GN=glgA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.629e-31
Identity = 78/238 (32.77%), Postives = 123/238 (51.68%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 740
            + GI+NG+D   W+P  D  + ++YD  T ++ K   K  LQ  +GL VD   P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P K      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A+      ++   +RRA   +   +L   + +  M  D SW+  A  + E
Sbjct:  241 LSGILNGVDDGIWSPQNDLLLPMRYDRDT-LEEKAENKRQLQIAMGLKVDDKAPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGKVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGLATGFVFEDSNAL------SLLRAIRRAFVLWSRPSLWRYVQRQAMNMDFSWQVAANSYRE 471          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_ACTSZ (Glycogen synthase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.629e-31
Identity = 75/233 (32.19%), Postives = 123/233 (52.79%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKWEE 740
            + G++NG+D   W+P  D YI   Y   + M  K   K  LQ    LP + N+PV   I RL EQKG D+L       + +  Q+++LG+G   ++  +  L   +P+       ++ PL+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +  +   + +        +  +  A+   ++R  + +  Q     ++   M QD  W+  A ++ E
Sbjct:  241 LAGVLNGVDDSIWHPNNDPYIHHHYKLKS-MSGKAKNKALLQERFNLPQNPNVPVFVMITRLTEQKGVDLLLQCADEIVNQGGQLMILGSGAPHLQDWVNWLASQHPDNVGVWIGYDEPLSHLMVAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRKTGGLADTVVDS-SAENIKARRATGFVFNNAEPEALRHCIQRVFSLWSKQRTWFTVRTVAMEQDFGWRVAAHRYHE 471          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_ACIAC (Glycogen synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.629e-31
Identity = 84/248 (33.87%), Postives = 124/248 (50.00%), Query Frame = 3
Query:   21 DNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKW 734
            D ++R     ++GI+NG+D   WNP  D  I   + A   ++ K   K AL+  +GL  D +  + G +GR+ EQKG D +       +++  Q+ +LG+G   +E  L  L   +P        F+  LAH I AG+D  L+PSRFEPCGL Q+++  YGT P+V  TGGL D+V +        TGF +   S           AA    V RAL  + T   A   + +NGM +D  W   A+ +
Sbjct:  240 DGVLRARAGRLQGILNGIDTALWNPSQDTLIPAPFSADR-LEGKAACKAALRRTLGLAQDGDRMLFGLVGRMTEQKGIDWVIGGAERLLRQGGQLAILGSGDPALESALRALAKRHPRHMHVTVGFDESLAHGIEAGSDSFLMPSRFEPCGLNQMYSQAYGTPPVVTPTGGLADSVTDADDPAGNGTGFVLRGSS----------QAAFDQAVGRALHLWKTAPDAWRRLQRNGMQRDFGWTASARAY 476          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_YERE8 (Glycogen synthase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.657e-31
Identity = 77/225 (34.22%), Postives = 117/225 (52.00%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 716
            + GI+NG+D   W+P TD  +  +YDA   +  K + K  LQ  +GL V    P+   + RL EQKG D++  A+P  ++   Q+ VLG G   +++        Y  +      ++   +H IIAGAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +      +   S      D  D  A+   +RRA   +   +    + ++ M  D  W+
Sbjct:  241 LTGILNGVDSDIWDPQTDTLLHARYDAED-LQKKAVNKTHLQTTMGLEVTEKKPIFAVVSRLTEQKGLDLVLEALPDLLQLGGQLAVLGAGDAILQEAFLAAAADYSGQVGVQIGYHEAFSHRIIAGADVILVPSRFEPCGLTQLYGLKYGTLPLVRHTGGLADTVVDCALE-NLADGSASGFVFDECDAQALVRAIRRAFVLWSRPKHWRHVQRHAMGLDFGWQ 463          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_PASMU (Glycogen synthase OS=Pasteurella multocida GN=glgA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.657e-31
Identity = 83/223 (37.22%), Postives = 121/223 (54.26%), Query Frame = 3
Query:   51 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWK 716
            GI+NG+D Q W+P  D YI   Y     M  K   KEALQA   LP D +  +   + RL EQKG D+L  +    +K+  Q+ +LG+G   +E  +  L   YP +      ++  L+H++IAG D IL+PSRFEPCGL QL+ ++YGT+P+V +TGGL DTV    T   + S        +  +  A+   +  A A +  Q L   +++  M QD SW+
Sbjct:  243 GILNGVDDQIWHPNHDAYIEHHYKLKA-MTGKRKNKEALQAYFNLPQDPDALLFVMVTRLTEQKGVDLLIDSAEEIVKQGGQLTILGSGSPHLEAGILHLAQQYPHQIAVKIGYDEALSHLMIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRATGGLADTVVNA-TVENIKSRLATGFVFEQANREALRQALVNAFALWQKQRLWFTVRSVAMEQDFSWQ 463          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP7 (Glycogen synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.657e-31
Identity = 79/238 (33.19%), Postives = 123/238 (51.68%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 740
            + GI+NG+D   W+P  D  + ++YD  T ++ K   K  LQ  +GL VD   P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P K      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV     E    G   G    D  A+      ++   +RRA   +   +L   + +  M  D SW+  A  + E
Sbjct:  241 LSGILNGVDDGIWSPQNDLLLPMRYDRDT-LEEKAENKRQLQIAMGLKVDDKAPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGKVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVADSSLENLADGLATGFVFEDSNAL------SLLRAIRRAFVLWSRPSLWRYVQRQAMNMDFSWQVAANSYRE 471          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_BURTA (Glycogen synthase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=glgA PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 8.657e-31
Identity = 85/247 (34.41%), Postives = 129/247 (52.23%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN--VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ--ALAEMMKNGMAQDLSWKGPAKKW 734
            R+  + GI+NG+D + WNP TD+++   Y     M  K   K ALQ E+GL  D   P++  + RL  QK SDI+   +P  + ++  +Q  + G G + +E+  + L   YP +      ++  LAH I AGAD +L  +RFEPCGL QL+AMRYGT+PIV   GGL D+V          E  TGF   + + D          A+S  +RR +  +  +    + + +  MA+D SW   A+ +
Sbjct:  238 RRDQLSGIMNGIDTELWNPATDRWLPQPYSIDD-MGGKAGCKAALQQELGLCADARAPLVASVCRLTSQKMSDIVLERLPEQLAQHPRMQFALHGRGDRALEQGFDALAAQYPRRVAVRIGYDETLAHRIHAGADILLHGARFEPCGLTQLYAMRYGTIPIVRRVGGLADSVVDLDTLAPHSEDATGFVFDAPTGD----------AMSEALRRCVNLHDARPGVWSALCRLAMARDSSWSRSARAY 473          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_AGRRK (Glycogen synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.657e-31
Identity = 85/247 (34.41%), Postives = 126/247 (51.01%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLESAGS 770
            R   + GIVNG+D   WNP TD  I   Y AST+ D     K+ ++   GL  D   P+   + RL  QKG D+LA+     +    ++ +LG G   +E  L      +  +    A +N  ++H++ AG D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DT+ +          +   +   PV    +   +RRA+  +  + +  +M K GM  D+SW   A+++      L S G+
Sbjct:  237 RAASLHGIVNGIDDGIWNPETDPMIARTYGASTLKDRAINRKQVVE-HFGLDDDDG-PIFCVVSRLTWQKGMDLLASISSEIVAMGGKLAILGAGDAALEGALFAAAGRHRGRVGVSAGYNEAMSHLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTIIDANHAALQAKVATGIQ-FSPVTAEGLLQAIRRAIYLFQDRKVWTQMQKQGMKSDVSWGKSAERYAALYSRLVSRGA 480          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_BORPA (Glycogen synthase OS=Bordetella parapertussis GN=glgA PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.131e-30
Identity = 89/255 (34.90%), Postives = 132/255 (51.76%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIG-VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT-------VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLESA 764
            R   +  + NG+D   WNP  D ++G +++DA  + + K   K ALQAE+GL    +  V+    RL  QK +D+  AA+P  ++  E++Q  ++G G+  +E  L  L   YP +      ++ PLAH + AGAD +L  SRFEP GL  L+AMRYGT+P+ +  GG+VDT       VEE   G   G         D  + A +   V RAL      A+ + M +N M  D SW+  A+ +     +L SA
Sbjct:  245 RGADLSPVPNGIDTALWNPAADPHLGGLRFDALDMRN-KACCKAALQAELGLQPRADATVLAMGSRLTGQKMADVAIAALPALLEAHEHLQFALIGRGEPALETALRALAARYPGRCAVHIGYDEPLAHRLHAGADLLLHGSRFEPFGLTPLYAMRYGTLPVASRVGGMVDTIRDPGPAVEESCAGQGTGFL------FDGSEPADMQLAVARALRALAKPAVCDAMRRNAMQADFSWRASAQAYAGLYASLASA 492          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.131e-30
Identity = 85/238 (35.71%), Postives = 122/238 (51.26%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEA---VDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 734
            R   + GIVNG+D + W+P TD +I   Y   T +  +   ++AL+   GL      P+   I RL  QKG D++A A    +    +++VLG+G   +E  L             V  ++ PL+H++ AGAD ILIPSRFEPCGL QL+ +RYG VP+VA TGGL DT+ +        + S  C       PV    +   +RR L  Y    L A +   GM  D+SW   A+++
Sbjct:  238 RVADLTGIVNGIDGETWDPQTDPHIPAHYGPGT-LKRRAGNRKALEERFGLEKGPG-PIFCVISRLTWQKGMDLVAEAADDIVALGGKLVVLGSGDPALESALMAAASRNRGHIGMVTGYDEPLSHLMQAGADAILIPSRFEPCGLTQLYGLRYGCVPVVARTGGLTDTIIDA----NEAALSAKCATGFHFLPVTTDGLRLAIRRVLRAYNEPKLWARLQYQGMKSDVSWAKSAERY 469          
The following BLAST results are available for this feature:
BLAST of EY703217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_KLEP36.629e-3132.77Glycogen synthase OS=Klebsiella pneumoniae (strain... [more]
GLGA_ACTSZ6.629e-3132.19Glycogen synthase OS=Actinobacillus succinogenes (... [more]
GLGA_ACIAC6.629e-3133.87Glycogen synthase OS=Acidovorax avenae subsp. citr... [more]
GLGA_YERE88.657e-3134.22Glycogen synthase OS=Yersinia enterocolitica serot... [more]
GLGA_PASMU8.657e-3137.22Glycogen synthase OS=Pasteurella multocida GN=glgA... [more]
GLGA_KLEP78.657e-3133.19Glycogen synthase OS=Klebsiella pneumoniae subsp. ... [more]
GLGA_BURTA8.657e-3134.41Glycogen synthase OS=Burkholderia thailandensis (s... [more]
GLGA_AGRRK8.657e-3134.41Glycogen synthase OS=Agrobacterium radiobacter (st... [more]
GLGA_BORPA1.131e-3034.90Glycogen synthase OS=Bordetella parapertussis GN=g... [more]
GLGA1_RHIME1.131e-3035.71Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703217 ID=EY703217; Name=EY703217; organism=Citrus sinensis; type=EST; length=913bp
TGTCTCGACCCACGCGTCCGGATAATATCATTCGCAAAACTGGCATTAAG
GGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGACAA
ATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCCTC
TTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAAT
ATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGA
TATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAA
TAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTG
GAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCC
TCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCA
GATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACC
GTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGG
CTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGG
ATCCAGTAGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCA
ACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCA
AGATCTTTCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTA
ACCTGGAAAGTGCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCT
CCTCTTGCCAAAGGAAATGTGGCCACTCCTTGATCGANGCTACAAAATCT
CCACTTTTATTTTGGGACCGCAACATGTTCCTGTAATTCTCCACAACCCC
AGATATTACTTAG
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