EY703217

Overview
NameEY703217
Unique NameEY703217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_CLOB8 (Glycogen synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glgA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.779e-37
Identity = 95/248 (38.31%), Postives = 138/248 (55.65%), Query Frame = 3
Query:   15 RPDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAK 728
            R D ++R+    ++GI NG+D  E+NP TDK+I   Y  +++ D K + K  LQ E+GL VD+NIP++  + RL  QKG D+L       ++ENVQ+++LGTG K  E+  + L+  Y  K     KF+  LA+ I A  D  L+PS FEPCGL QL A+RYG++PIV  TGGL DT+        EG  GF   +++ D           +   +  AL  Y  +   E +++N M  D SW   A+
Sbjct:  231 RLDGVLRERSYALRGITNGIDYDEFNPKTDKFIKKNYSINSIED-KAINKTELQKELGLTVDKNIPMLAMVTRLTSQKGMDLLVNISDKLLQENVQLVILGTGDKHYEEHFKWLDSRYGNKVSANIKFDNGLANKIYAACDMFLMPSLFEPCGLGQLIALRYGSIPIVRETGGLKDTITAYNEYTGEG-NGFSFRNYNSD----------ELYNIIEYALWIYKDKGKWENLIENAMNSDNSWNRSAQ 466          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.740e-37
Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLES 761
            + GI+NG+D +EW+P  D+++  +Y A   +  K   K ALQ    LP    IP++G +GR+  QKG D+L  AA P       Q++V+G+G   +E+    L   YPE       ++ PLAH + AGAD  ++PSRFEPCGL Q++++RYGTVP+V +TGGL DTV +          +   +  D     A++  + RALA Y   A    +M+ GMAQD SW   A+ + +   +L S
Sbjct:  245 LTGILNGVDYREWDPGKDRHLVARYSADD-LSGKARCKAALQHHFKLPCHSGIPLLGHVGRMVAQKGVDLLLKAAEPLLAAGEAQLVVVGSGDATLEQTARSLAERYPEHMGLHIGYSEPLAHQLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVDADPAHLAARDATGIQ-FDEATPQALADALARALALYHDPACWKRLMQAGMAQDFSWGRSAEAYLDLYKDLVS 483          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP2 (Glycogen synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=glgA PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.740e-37
Identity = 95/245 (38.78%), Postives = 132/245 (53.88%), Query Frame = 3
Query:   30 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP---VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 734
            +R   + GI+NG+D + W+P  D+ I   YD  T+  A+   K+ALQ+  GL   RN P   + G I RL  QKG D+L   +P  + E  Q+ +LG G  P+E+      + YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +       TG   G  FS       PV    ++  + +  A +   A    +  NGM  D+SWK PA+ +
Sbjct:  239 LRADRLSGILNGIDTRVWDPTADELIPATYDIETI-GARARNKQALQSRFGL---RNAPDALLYGVISRLSWQKGLDMLLDVLPGMLAEGAQLALLGAGDTPLEQGFRAAALKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS-------PVTAQMLAKALTKTAALHADHAAWRNLQINGMTTDVSWKNPAQHY 472          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_BACST (Glycogen synthase OS=Bacillus stearothermophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 8.084e-37
Identity = 92/244 (37.70%), Postives = 135/244 (55.33%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNGMAQDLSWKGPAKKWEE 740
            R+  + GI+NG+D + +NP  D ++   Y   T  + K L K ALQ + GLP   ++P+I  + R+  QKG D++       + E++Q++VLGTG    E+   Q+   YP K      F+ PLAH I AGAD  LIPS FEPCGL Q+ A+RYGT+PIV  TGGL DTV+       EG  GF   +F+             +  T+RRAL+ Y   ++ E + +  M  D SW+  A ++++
Sbjct:  238 RRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTGDWRFEQFFSQMAAAYPGKVGVYIGFHEPLAHQIYAGADLFLIPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTVQSYNEITKEG-NGFSFTNFNAH----------DMLYTIRRALSFYRQPSVWEQLTERAMRGDYSWRRSANQYKQ 469          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.056e-36
Identity = 95/241 (39.42%), Postives = 135/241 (56.02%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEE 740
            + GI+NG+D   +NP  D  I   +     +  K  +K  LQ   GLP++ N+P+IG + RL  QKG D++ + +   ++ENVQI++LGTG   +E+        YP+K      F+I  A  I AG+DF L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTV       +EG TGF      VD E    V+      T+ RAL  YG   + L +M+ + M++D SW   A+++ E
Sbjct:  245 VSGILNGIDYDIYNPENDILIPYHFSEEE-LSGKGQMKAELQKRTGLPLNPNVPLIGMVSRLTNQKGFDLVLSQLEKVLEENVQIVLLGTGFPEIEEGFRYFSQKYPDKLSANIAFDIQFAQEIYAGSDFFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLKDTVIPFNPISKEG-TGFGF----VDFEGQILVE------TINRALEVYGKEPEVLNKMVLSAMSKDFSWGTKAQQYIE 473          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_SYNE7 (Glycogen synthase OS=Synechococcus elongatus (strain PCC 7942) GN=glgA PE=3 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 1.379e-36
Identity = 96/234 (41.03%), Postives = 137/234 (58.55%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 740
            + GI+NG+DV  +NP TD  I   YD  T +D +   K ALQ E+GL V+ +  +IGF+ RL EQKG D+L   +  F+   + Q +VLGTG++  E QL +L   YP +      ++  L+  I AG+D  L+PSRFEPCG+ Q+ A+RYG+VPIV  TGGLVDTV         G+     +  +P+D   + T + RA  +Y  Q    ++ + GMA DLSWK  A  +E+
Sbjct:  221 LSGILNGIDVDSYNPATDTRIVANYDRDT-LDKRLNNKLALQKEMGLEVNPDRFLIGFVARLVEQKGIDLLLQILDRFLSYSDAQFVVLGTGERYYETQLWELATRYPGRMSTYLMYDEGLSRRIYAGSDAFLVPSRFEPCGITQMLALRYGSVPIVRRTGGLVDTVFHHDPRHAEGN-GYCFDRYEPLD---LYTCLVRAWESYQYQPQWQKLQQRGMAVDLSWKQSAIAYEQ 449          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_PROMA (Glycogen synthase OS=Prochlorococcus marinus GN=glgA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.379e-36
Identity = 99/269 (36.80%), Postives = 149/269 (55.39%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAGSEPGIDGEEIAPLAKGNVATP 830
            ++GI+NG+D+ EW+P TDK +   + +S  M  +   KEALQ ++GL V+ +  ++G +GRL +QKG D+L       +   + QI+VLGTG + +E  L +L I +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL AMRYG++PIV + GGLVDTV       +  TGF    F       +P+D    +  VR   A    ++  E+ K  M Q  SW+  A ++ ET+    S   EP  D  E+   + G  A P
Sbjct:  221 LRGILNGIDLDEWDPATDKALPANF-SSGKMSTRKKNKEALQRQMGLEVNNDKYLLGMVGRLVDQKGVDLLLQVSRRLLAYTDSQIVVLGTGDQILESALWELAIDHPGRFAVFLTYDDYLSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRNVGGLVDTVIPHDPINKSGTGFCFDRF-------EPIDF--YTALVRSWEAFRHRRSWKELQKRAMTQMYSWERSAMEY-ETMYKEVSGYKEPSPDAIEVEKFSVGQDADP 478          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_PROM4 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=glgA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.379e-36
Identity = 96/264 (36.36%), Postives = 144/264 (54.55%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAGSEPGIDGEEIAPLAKGNVATP 830
            ++GI+NG+D+ +WNP TDK +   + AS ++  +   K ALQ+++GL V  N  ++G +GRL +QKG D+L       +   + QI+VLGTG+  +E  L QL   YP +      ++  L+ +I AG D  L+PSRFEPCG+ QL AMRYG++P+V + GGLVDTV       Q G+ F  D    +P+D    +  VR   A    ++   +    M Q  SW   A ++E    ++     EP  D EE+   + G  A P
Sbjct:  221 LRGILNGIDLDDWNPETDKALPANFSASNILGRRKN-KAALQSQMGLDVKPNSYLLGMVGRLVDQKGVDLLLQVARRLLAYTDSQIVVLGTGESALESALWQLATEYPGRFAVFLTYDDYLSRLIYAGTDAFLMPSRFEPCGISQLLAMRYGSIPVVRNVGGLVDTVSPHDPSKQTGTGFCFD--RFEPIDF--YTALVRSWEAYRHRRSWRRLQIRAMTQTYSWDRSAYEYENMYKDV-CGVKEPSPDAEEVEKFSVGQDADP 478          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_PROM1 (Glycogen synthase OS=Prochlorococcus marinus (strain NATL1A) GN=glgA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.801e-36
Identity = 97/265 (36.60%), Postives = 144/265 (54.34%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAG-SEPGIDGEEIAPLAKGNVATP 830
            ++GI+NG+D+ EWNP TD  +  K+    +   + + K  LQ  +GL V+ +  ++G +GRL +QKG D+L       +   + Q++VLGTG + +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTVE      + GS F  D    +P+D    ++ VR   A    ++  E+    M+   SW   AK++E  L+  +  G  EP  D  E+   + G  A P
Sbjct:  221 LRGILNGVDLDEWNPATDNSLPAKFSVDNI-SGRAINKRVLQERMGLEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFD--RYEPIDF--YTSLVRSWEAYRHQKSWKELQLRAMSNKYSWDRSAKEYE--LMYKDVCGIKEPSPDAAEVEKFSYGQEADP 478          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_GEOTN (Glycogen synthase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.801e-36
Identity = 91/244 (37.30%), Postives = 135/244 (55.33%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM-KNGMAQDLSWKGPAKKWEE 740
            R+  + GI+NG+D + +NP  D ++   Y   T  + K L K ALQ + GLP   ++P+I  + R+  QKG D++       + E++Q++VLGTG    E+   Q+   YP K      F+ PLAH I AGAD  L+PS FEPCGL Q+ A+RYGT+PIV  TGGL DTV+       EG  GF   +F+             +  T+RRAL+ Y   ++ E + +  M  D SW+  A ++++
Sbjct:  238 RRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTGDWRFEQFFSQMAAAYPGKVGVYIGFHEPLAHQIYAGADLFLMPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTVQSYNEITKEG-NGFSFTNFNAH----------DMLYTIRRALSFYRQPSVWEQLTERAMRGDYSWRRSANQYKQ 469          
The following BLAST results are available for this feature:
BLAST of EY703217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CLOB82.779e-3738.31Glycogen synthase OS=Clostridium beijerinckii (str... [more]
GLGA_THISH4.740e-3737.76Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_RHOP24.740e-3738.78Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_BACST8.084e-3737.70Glycogen synthase OS=Bacillus stearothermophilus G... [more]
GLGA_LACLA1.056e-3639.42Glycogen synthase OS=Lactococcus lactis subsp. lac... [more]
GLGA_SYNE71.379e-3641.03Glycogen synthase OS=Synechococcus elongatus (stra... [more]
GLGA_PROMA1.379e-3636.80Glycogen synthase OS=Prochlorococcus marinus GN=gl... [more]
GLGA_PROM41.379e-3636.36Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROM11.801e-3636.60Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_GEOTN1.801e-3637.30Glycogen synthase OS=Geobacillus thermodenitrifica... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703217 ID=EY703217; Name=EY703217; organism=Citrus sinensis; type=EST; length=913bp
TGTCTCGACCCACGCGTCCGGATAATATCATTCGCAAAACTGGCATTAAG
GGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGACAA
ATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCCTC
TTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAAT
ATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGA
TATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAA
TAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTG
GAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCC
TCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCA
GATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACC
GTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGG
CTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGG
ATCCAGTAGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCA
ACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCA
AGATCTTTCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTA
ACCTGGAAAGTGCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCT
CCTCTTGCCAAAGGAAATGTGGCCACTCCTTGATCGANGCTACAAAATCT
CCACTTTTATTTTGGGACCGCAACATGTTCCTGTAATTCTCCACAACCCC
AGATATTACTTAG
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