EY703217

Overview
NameEY703217
Unique NameEY703217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_CHLPD (Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=glgA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.801e-36
Identity = 83/237 (35.02%), Postives = 136/237 (57.38%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEE 740
            RK  + GI+NG+D ++WNP TDK I  +Y     +D K   K+ALQ E GL VD   P++G I   +E +G+D+LA ++   +  ++Q+++ G+G K  EK        YPE+     ++     H+ IAG D +L+P R E CG++QL AM YGT+P+V + GG+++T+ E   G  +GS  +  E  D   V  +S     ALA Y   +   +++   M++D +WK  A+++++
Sbjct:  252 RKENLHGILNGIDTRQWNPATDKLIKKRYSIER-LDGKADNKKALQEEAGLSVDAERPLVGVIAGFDEFQGADLLARSLEKLVALDMQLVICGSGDKVYEKTFRDFAEQYPEQVSLQIEYTDAFMHLAIAGMDILLMPGRIESCGMMQLFAMSYGTIPVVYAGGGIIETIHELQEG--IGSGFIFHEYTDDSLVGKLS----EALAMYSDEERWPQLVHEAMSKDFAWKSSAEEYDQ 481          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_BACSU (Glycogen synthase OS=Bacillus subtilis GN=glgA PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.801e-36
Identity = 93/255 (36.47%), Postives = 140/255 (54.90%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEETLLNLESAGSE 773
            R+  + GI+NG+D   + P +D YI  +YD+  +   K   K  LQ  +GLP   +IP+I  + RL +QKG D++   +   ++E ++Q++VLGTG++  E      E  + EK R    F+ PLAH I AG+D  L+PS+FEPCGL QL A++YG +PIV  TGGL DTV     EEG   GF   +F+             +  T+ RAL+ Y  Q +   ++K  M  D SW   AK+++     +  +G +
Sbjct:  238 REDDVTGILNGIDDTFYQPKSDPYIEAQYDSGDLA-CKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGFTFSAFNAH----------DLKFTIERALSFYCQQDVWKSIVKTAMNADYSWGKSAKEYQRIFEQVTRSGRD 481          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_STRGC (Glycogen synthase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=glgA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.352e-36
Identity = 96/242 (39.67%), Postives = 134/242 (55.37%), Query Frame = 3
Query:   21 DNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA--LATYGTQALAEMMKNGMAQDLSW 713
            D I+R    K  GIVNG+D + +NP TD  +   +D S  +  K   K ALQ  VGLPV  ++P++G + RL  QKG D++   + +F++++VQII+LGTG    E+        YP+K      F++ LA  I A +D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTVE       +G TGF   +FS             +S T + A  L T+  +A   M +  M +D SW
Sbjct:  232 DQILRMESGKLVGIVNGIDTEIYNPETDPLLAHHFDKSD-LSGKLENKRALQERVGLPVRDDVPLVGIVSRLTRQKGFDLVVEELHNFLQQDVQIILLGTGDPAFEQAFAWFGQAYPDKLSANILFDVGLAQEIYAASDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGQG-TGFSFNNFS----------GYWLSWTFKEALNLYTHDKEAWKSMQEQAMERDFSW 461          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_NITMU (Glycogen synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.352e-36
Identity = 94/255 (36.86%), Postives = 138/255 (54.12%), Query Frame = 3
Query:   30 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS------------TTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 755
            +R   I GIVNG+   EWNP+ D ++   Y     +  K + K ALQ ++GL VD ++P+ G + RL  QKG D+L   I   I    Q+++LG+G+  +E++L ++   +P K      F+  LAH+I AGAD  L+PSRFEPCGL Q+++  YGT P+V  TGGL+DTV             VDC A    D  A                + RA+A Y  + + + +M+NGM QD SW+  A  + +  L+L
Sbjct:  252 LRHEHITGIVNGIS-DEWNPVNDPHLEQNYSMDD-LSGKVINKAALQQQLGLTVDPDVPLFGAVSRLTYQKGYDLLLRIITQLIDIPGQLVILGSGETMLEQELMRMARNHPGKMAVRIGFDEKLAHLIEAGADCFLMPSRFEPCGLNQMYSQCYGTPPLVHGTGGLLDTV-------------VDCTAESLADGTATGFVFHELTPEAFLGALERAVAAYRDKPVWDRLMRNGMVQDFSWRASATDYRKIYLSL 491          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_STRSV (Glycogen synthase OS=Streptococcus sanguinis (strain SK36) GN=glgA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.072e-36
Identity = 96/255 (37.65%), Postives = 135/255 (52.94%), Query Frame = 3
Query:   21 DNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 755
            D I+R    K  GIVNG+D   +NP TD  +   +D S  +  K   K ALQ  VGLPV  ++PV+G + RL  QKG D++   + + ++E+VQII+LGTG    E+        YP+K      F++ LA  I A +D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTVE         TGF   +FS             ++ T + AL  Y    +A   + +  M +D SW   +K + +   +L
Sbjct:  232 DQILRMESGKLVGIVNGIDTDIYNPETDPLLAHHFDKSD-LSGKLENKRALQERVGLPVRDDVPVVGIVSRLTRQKGFDLVVEELHNLLQEDVQIILLGTGDPAFEQAFAWFGHAYPDKLSANILFDVTLAQEIYAASDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGKGTGFSFNNFS----------GYWLTWTFKEALKLYADDKEAWKSLQEQAMERDFSWDTASKAYSDLYQSL 475          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_NITEU (Glycogen synthase OS=Nitrosomonas europaea GN=glgA PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 95/241 (39.42%), Postives = 127/241 (52.70%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE---------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL-ATYGTQALAEMMKNGMAQDLSWKGPA 725
            R   I GI+NG+D   WNP TD +I  KY +S  + AK + K ALQ E+GL  +  IP+   I RL  QKG DIL    P       Q+++LG G + +EKQL  L    P +      ++  L+H I A AD  L+PSRFEPCGL Q+++ RYGT PIV +TGGL+DTV          E  +GF     + D          A    + RA+ A Y T+    +  NGM +D SW+  A
Sbjct:  253 RSNAITGIINGIDNTVWNPATDPHIVKKY-SSRNLAAKKINKLALQREMGLEENETIPLFAGISRLSYQKGYDILLQVAPMLADLPAQLVLLGKGDQSLEKQLVMLAQTNPARIAVRIDYDEALSHRINASADCFLMPSRFEPCGLNQMYSQRYGTPPIVHTTGGLIDTVTDLAPDTPAGESASGFHFHEMTAD----------AFMNGIGRAIDAYYNTRLWKTLQHNGMRKDFSWRSSA 482          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_NITEC (Glycogen synthase OS=Nitrosomonas eutropha (strain C91) GN=glgA PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 90/245 (36.73%), Postives = 131/245 (53.47%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 737
            R   I GIVNG+D   WNP TD Y+  KY  S  + AK   K ALQ  +GL  ++ IP+ G + RL  QKGSDI+    P       Q+ +LG+G   +E+QL  L   +P K      ++  L+H+I AG D  L+PSRFEPCGL Q+++  YGT P+V +TGGL+DTV         ++  +GF     + D          +    ++RA+  Y  T+    + +NGM +D SW+  A  ++
Sbjct:  253 RSDDITGIVNGIDTAIWNPATDPYLVKKY-TSRNLSAKAANKLALQQTMGLENNQAIPLFGTVSRLTHQKGSDIMLQVAPMLADLPAQLALLGSGDALLEQQLAALAQAFPTKIAVRIGYDEALSHLINAGTDCFLMPSRFEPCGLNQMYSQHYGTPPVVHATGGLMDTVVDLTPETLADKSASGFHFHEMTAD----------SFMEGIKRAINAYHNTRLWKNLQRNGMQKDFSWQASASAYQ 486          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_LACAC (Glycogen synthase OS=Lactobacillus acidophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 98/249 (39.36%), Postives = 136/249 (54.62%), Query Frame = 3
Query:   21 DNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWE 737
            D I+R    K  GI+NG+D +++NP TD  I   YD    +  K   K ALQ E+ LP+  NIP+IG + RL  QKG  +L   + + ++ NVQI++LG G    E +L ++   YP+K + +  F++ LA  I AGAD  L+PS FEPCGL QL A+RYGT+PIV   GGL DTV        EG TGF    FS             +   +++ LA Y  +    ++ K  M  D SWK  A K++
Sbjct:  232 DAILRMCSHKLTGILNGIDFEKYNPKTDPVIKKNYDVYH-LHHKSKDKIALQKELDLPIKPNIPLIGMVSRLTAQKGCQLLLDELDNILQFNVQIVILGNGDPYYEHRLMEIAERYPDKLKVILAFDVKLAQRIYAGADSFLMPSAFEPCGLSQLIALRYGTLPIVHEIGGLADTVWVYDETTNEG-TGFGFKEFS----------GYQMVQAIKKMLALYQQKNNWLKIQKIAMKSDFSWKNSADKYK 468          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA1_ANASP (Glycogen synthase 1 OS=Anabaena sp. (strain PCC 7120) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 94/240 (39.17%), Postives = 137/240 (57.08%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 740
            + GIVNG+D + ++P  DKYI   + A T +D +   K ALQ EVGL V+ N  +IG + RL EQKG D++   +  F+   + Q ++LGTG +  E Q+ QL   YP +      +N  L+  I AG D  L+PSRFEPCG+ Q+ A+RYG++PIV  TGGLVDTV       E  TG+    +       +P+D   + T + RA   +  +    E+ K GM+QD SW   AK++++
Sbjct:  221 LSGIVNGIDTEVYDPANDKYIAQTFTADT-LDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAYTDAQFVLLGTGDRYYETQMWQLASRYPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPCGISQMMALRYGSIPIVRRTGGLVDTVSHHDPINEAGTGYCFDRY-------EPLD---LFTCMIRAWEGFRYKPQWQELQKRGMSQDFSWYKSAKEYDK 449          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS9 (Glycogen synthase OS=Synechococcus sp. (strain CC9902) GN=glgA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.240e-36
Identity = 96/265 (36.23%), Postives = 146/265 (55.09%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAG-SEPGIDGEEIAPLAKGNVATP 830
            ++GI+NG+D++ W+P TDK +   Y A+  +  K + K+ LQ  +GL V  +  ++G + RL +QKG D+L       +   + QI+VLGTG + +E  L QL   YP K      ++  L+ +I AG+D  L+PSRFEPCG+ QL+AMRYG+VP+V + GGLVDTV         G+ F  D    +PVD    +  VR   A     +  ++ K GM +D SW   A +++  L+  +  G  EP  D   +   ++G  A P
Sbjct:  221 LRGILNGIDLEAWDPATDKALPANYSAAD-LTGKAVCKQVLQERMGLEVRDDAFLLGMVTRLVDQKGVDLLLQVADRLLSYTDSQIVVLGTGDRGLESGLWQLASRYPGKCAVFLTYDDDLSRLIYAGSDAFLMPSRFEPCGISQLYAMRYGSVPVVRNVGGLVDTVPPHDPNADRGTGFCFD--RFEPVDF--YTALVRAWEAYRHRSSWQDLQKRGMTEDYSWDRSAVEYD--LMYKDVCGIKEPTPDAALLEQFSRGQDADP 478          
The following BLAST results are available for this feature:
BLAST of EY703217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CHLPD1.801e-3635.02Glycogen synthase OS=Chlorobium phaeobacteroides (... [more]
GLGA_BACSU1.801e-3636.47Glycogen synthase OS=Bacillus subtilis GN=glgA PE=... [more]
GLGA_STRGC2.352e-3639.67Glycogen synthase OS=Streptococcus gordonii (strai... [more]
GLGA_NITMU2.352e-3636.86Glycogen synthase OS=Nitrosospira multiformis (str... [more]
GLGA_STRSV3.072e-3637.65Glycogen synthase OS=Streptococcus sanguinis (stra... [more]
GLGA_NITEU4.012e-3639.42Glycogen synthase OS=Nitrosomonas europaea GN=glgA... [more]
GLGA_NITEC4.012e-3636.73Glycogen synthase OS=Nitrosomonas eutropha (strain... [more]
GLGA_LACAC4.012e-3639.36Glycogen synthase OS=Lactobacillus acidophilus GN=... [more]
GLGA1_ANASP4.012e-3639.17Glycogen synthase 1 OS=Anabaena sp. (strain PCC 71... [more]
GLGA_SYNS95.240e-3636.23Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703217 ID=EY703217; Name=EY703217; organism=Citrus sinensis; type=EST; length=913bp
TGTCTCGACCCACGCGTCCGGATAATATCATTCGCAAAACTGGCATTAAG
GGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGACAA
ATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCCTC
TTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAAT
ATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGA
TATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAA
TAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTG
GAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCC
TCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCA
GATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACC
GTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGG
CTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGG
ATCCAGTAGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCA
ACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCA
AGATCTTTCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTA
ACCTGGAAAGTGCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCT
CCTCTTGCCAAAGGAAATGTGGCCACTCCTTGATCGANGCTACAAAATCT
CCACTTTTATTTTGGGACCGCAACATGTTCCTGTAATTCTCCACAACCCC
AGATATTACTTAG
back to top