EY703217

Overview
NameEY703217
Unique NameEY703217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length913
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_RHOBA (Glycogen synthase OS=Rhodopirellula baltica GN=glgA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.240e-36
Identity = 88/243 (36.21%), Postives = 133/243 (54.73%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN--VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGMAQDLSWKGPAKKW 734
            + GI+NG+D   WNP TD ++   Y      DAK   K ALQAEVGLP D ++P++G IGRL +QKG D++   +   + E    Q +VLG+G   +E+QL +L   +PE+      F+  LAH I A +D  ++PS +EPCGL QL+++RYGT  +V  TGGL DT+ +           TGF +   S            A+   + RAL    +  +    +++ GM+QD +W+  A ++
Sbjct:  257 VAGIINGIDTNIWNPETDPHLKRNYSVVDWADAKIDNKLALQAEVGLPQDPDVPLLGLIGRLADQKGWDLILPVLKQHLAEARPTQWVVLGSGDPKIEEQLRELTEQHPEQLAAYIGFSDALAHRIEASSDMFIMPSHYEPCGLNQLYSLRYGTPCVVTKTGGLADTIVDATPENVAANLATGFHLNDSS----------AGALDHAINRALQLRYHSPEKWKNLVEFGMSQDWTWRKSADQY 489          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.240e-36
Identity = 97/266 (36.47%), Postives = 145/266 (54.51%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAG-SEPGIDGEEIAPLAKGNVATP 830
            ++GI+NG+D+ EWNP TD  +  K+    +   + + K  LQ  +GL V+ +  ++G +GRL +QKG D+L       +   + Q++VLGTG + +E  L QL I YP +      ++  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTVE      + GS F  D    +P+D     T++ R+   Y  Q +  ++    M+   SW   AK++E  L+  +  G  EP  D  E+   + G  A P
Sbjct:  221 LRGILNGVDLDEWNPATDNSLPAKFSVDNI-SGRAINKRVLQERMGLEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFD--RYEPID---FYTSLVRSWEEYRHQKSWKQLQLRAMSNKYSWDRSAKEYE--LMYKDVCGIKEPSPDAAEVEKFSYGQEADP 478          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_HAEPS (Glycogen synthase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=glgA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.240e-36
Identity = 93/242 (38.43%), Postives = 130/242 (53.72%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF---------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 740
            ++GI+NG+D   WNP TD  I   Y  +  M  K   K  LQ   GLP D++  +   + RL EQKG+D L A I   ++ NVQ++VLG+G   +E  L   +  YP K      ++  L+H IIAG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +           TGF    FS         D       V RA+  +G   L + + +N +AQD  W   A++++E
Sbjct:  241 LRGILNGVDDTVWNPETDTNIVANYRPN-YMQGKGKNKSELQRYFGLPEDKDALLFVMVTRLTEQKGADFLLARIDQIMQHNVQLVVLGSGSPDLEWALRDAQSRYPHKIGLKIGYDEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVNDAHKESIENRTATGF---VFSYP-------DADNFYDAVLRAINLWGKNKLWSSVRQNALAQDFGWAKVAQQYQE 471          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_GEOUR (Glycogen synthase OS=Geobacter uraniireducens (strain Rf4) GN=glgA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.240e-36
Identity = 89/244 (36.48%), Postives = 137/244 (56.15%), Query Frame = 3
Query:   30 IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 740
            +R   + G++NG+D   W+P TD+ +   Y   T    K + K+ LQ  +GL    ++PVIG + RL  QKG D+LA  +P F++  +Q+++LGTG +   K L+ +      KARG    ++       LA  I AG+D  L+PS +EPCGL Q+ A+RYG VP+V  TGGL DTV +     Q G+   +  + +     A+  TV R+L  +  + A  ++MK GM+ D SW   A+++EE
Sbjct:  241 VRNADLHGVLNGLDYDLWDPATDRGLYKNYSV-TAPAGKAVNKKGLQKLLGLEPAADVPVIGIVSRLTAQKGFDLLAELMPKFVRSRLQLVILGTGDEKYLKLLQDI------KARGAGNISVNIGFHPELAPKIYAGSDIFLMPSHYEPCGLGQMIALRYGAVPLVRKTGGLADTVFDE----QDGATEPNGFSFEDYTPEALWETVSRSLQAFDDKGAWKKLMKRGMSCDYSWDASARRYEE 473          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_SYNS3 (Glycogen synthase OS=Synechococcus sp. (strain CC9311) GN=glgA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.844e-36
Identity = 98/278 (35.25%), Postives = 147/278 (52.88%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAG-SEPGIDGEEIAPLAKGNVATP*SXLQNLH 854
            ++GI+NG+D++ WNP TD+ +   + A   +  +   K+ LQ  +GL V  +  ++G + RL +QKG D+L       +   + QI+VLGTG + +E  L Q+   +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL AMRYG VP+V   GGLVDTV      ++  TGF    F       DPVD    +  VR   A     +  E+ + GM QD SW   A ++++  +  E  G  EPG D   +   ++G  A P S  Q  H
Sbjct:  221 LRGILNGIDLEAWNPATDRALPATFSADD-LSGRARNKQVLQERMGLEVRPDAYLLGMVSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDRGLESGLWQMASRHPGRVSVFLTYDDDLSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGCVPVVRKVGGLVDTVPPHDPAQQSGTGFCFDRF-------DPVDF--FTALVRSWEAFRHQDSWRELQRRGMRQDYSWARSAMEYDQ--MYREVCGLKEPGPDAAAVEQFSQGQDADP-SLAQGQH 485          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPW (Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.938e-36
Identity = 92/269 (34.20%), Postives = 145/269 (53.90%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAGSEPGIDGEEIAPLAKGNVATP 830
            ++GI+NG+D++ WNP TDK +   + ++ +   K   K+ LQ  +GL ++ +  ++G + RL +QKG D+L       +   + QI+VLGTG + +E  L QL   +P +      ++  L+ +I AG+D  L+PSRFEPCG+ QL+AMRYG VP+V   GGLVDTV      ++  TGF    F       +PVD    +  VR   A    ++  E+ + GM QD SW   A +++    ++     EP  D   +   ++G  A P
Sbjct:  221 LRGILNGIDLEAWNPATDKALPATFSSANLA-GKATCKQVLQERMGLTLNPDTFLLGMVSRLVDQKGVDLLLQVADRLLAYTDTQIVVLGTGDRGLESGLWQLASRHPGRVAVFLTYDDALSRLIYAGSDAFLMPSRFEPCGISQLYAMRYGCVPVVRKVGGLVDTVPPHDPRQKSGTGFCFDRF-------EPVDF--YTALVRAWEAFRHPESWKELQRRGMEQDYSWARSALEYDRMYRDV-CGLKEPSPDAAAVEQFSQGQEADP 478          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.938e-36
Identity = 90/253 (35.57%), Postives = 133/253 (52.57%), Query Frame = 3
Query:   33 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA--KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT-VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLESAGSEPG 779
            R   + GI+NG D + WNP  D ++     A T  DA  K   K ALQAE+GL    + P++  + RL + KG D++ AA+P+ +K   Q+ V+GTG +P+E         +P +      ++ PLAH ++AG D +L+PSRFEPCGL Q +A RYGTVP+  +TGGL DT V+ G+     G    +    +  +V A    V RA+  Y  +     ++K   AQD  W   A  + +   +L   G   G
Sbjct:  243 RAADLTGILNGADYEVWNPAADTHLD---HAFTPGDAAGKACNKAALQAELGLSQAPDAPLMVIVSRLNDHKGMDLVLAALPNILKMGAQVAVVGTGDRPLEDGFRAAAAAHPTQVAARIGYSEPLAHRMMAGGDMLLMPSRFEPCGLTQFYAFRYGTVPVAHATGGLADTLVDTGYDTLMTG--KANGFVFEHSNVGAFQWAVERAVGLYAKKDQWTRIVKACNAQDFGWGRSAGLYRDLYKSLTGNGGGKG 490          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_ELUMP (Glycogen synthase OS=Elusimicrobium minutum (strain Pei191) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.938e-36
Identity = 86/233 (36.91%), Postives = 133/233 (57.08%), Query Frame = 3
Query:   51 GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 740
            GI+NG+D   W+P  D  I   Y++ + +  K   K+ LQ  +GL V  + P++G + R++ QKG D++   +  + K+ VQ +V+GTG   MEK    L      K   VAK +  LAH + AG+D  L+PSRFEPCGL Q+ +MRYGTVPIV+  GGL+DTV+  +G T +  G F ++           +  ++  AL  Y   +    ++KNGM +D SW   A+++++
Sbjct:  249 GILNGLDTGVWDPEHDPLIPYSYESFSPVKGKAACKQFLQNMLGLEVSPSKPLVGIVSRMDYQKGLDLIPGVVNKY-KDKVQFVVVGTGDSGMEKAFMALAKNNVGKVAYVAKVDEELAHRVYAGSDIFLMPSRFEPCGLSQMISMRYGTVPIVSRVGGLLDTVKGYDGITKYATGFFILE------FSETGIERSLDYALKYYQDKRCWGMLIKNGMEKDFSWTKSAQEYQD 474          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA_STRU0 (Glycogen synthase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.167e-35
Identity = 90/246 (36.59%), Postives = 136/246 (55.28%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 758
            + GIVNG+D + +NP  D ++   +  +  +  K   K+ LQ ++GLPV+ NIP+IG + RL +QKG DIL + +   +++++Q++VLGTG +  E+        YPEK      F+I LA  I A +D  L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTVE      +  TGF    FS             ++ T+  AL  +    +    + KN M+ D SW   +  +E+  ++L+
Sbjct:  242 LSGIVNGIDTELYNPENDPHVTFPFSIND-LSGKAKNKKELQEQLGLPVNENIPLIGIVSRLTDQKGFDILVSELESILQQDLQMVVLGTGYQQYEEAFRWFANCYPEKLSANITFDIGLAQKIYASSDMFLMPSAFEPCGLSQMMAMRYGTLPIVHEIGGLKDTVEPFNPFDKTGTGFGFNHFS----------GFWMTNTLLFALDIFHNHKEDWQAIQKNAMSADFSWDTASLAYEKLYMDLK 476          
BLAST of EY703217 vs. ExPASy Swiss-Prot
Match: GLGA2_ANAVT (Glycogen synthase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.167e-35
Identity = 93/239 (38.91%), Postives = 137/239 (57.32%), Query Frame = 3
Query:   45 IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT------VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWE 737
            + GIVNG+D + ++P  DK+I   + A T +D +   K ALQ EVGL V+ N  +IG + RL EQKG D++   +  F+   + Q ++LGTG +  E Q+ QL   YP +      +N  L+  I AG+D  L+PSRFEPCG+ Q+ A+RYG++PIV  TGGLVDT      V E  TG+    +       +P+D   + T + RA   +  +    E+ K GM+QD SW   AK+++
Sbjct:  221 LSGIVNGIDTEVYDPANDKFIAQTFTADT-LDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAYTDAQFVLLGTGDRYYETQMWQLASRYPGRMATYLLYNDALSRRIYAGSDAFLMPSRFEPCGISQMMALRYGSIPIVRRTGGLVDTVSHHDPVNEAGTGYCFDRY-------EPLD---LFTCMIRAWEGFRYKPQWQELQKRGMSQDFSWYKSAKEYD 448          
The following BLAST results are available for this feature:
BLAST of EY703217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_RHOBA5.240e-3636.21Glycogen synthase OS=Rhodopirellula baltica GN=glg... [more]
GLGA_PROMT5.240e-3636.47Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_HAEPS5.240e-3638.43Glycogen synthase OS=Haemophilus parasuis serovar ... [more]
GLGA_GEOUR5.240e-3636.48Glycogen synthase OS=Geobacter uraniireducens (str... [more]
GLGA_SYNS36.844e-3635.25Glycogen synthase OS=Synechococcus sp. (strain CC9... [more]
GLGA_SYNPW8.938e-3634.20Glycogen synthase OS=Synechococcus sp. (strain WH7... [more]
GLGA_MAGSA8.938e-3635.57Glycogen synthase OS=Magnetospirillum magneticum (... [more]
GLGA_ELUMP8.938e-3636.91Glycogen synthase OS=Elusimicrobium minutum (strai... [more]
GLGA_STRU01.167e-3536.59Glycogen synthase OS=Streptococcus uberis (strain ... [more]
GLGA2_ANAVT1.167e-3538.91Glycogen synthase 2 OS=Anabaena variabilis (strain... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703217 ID=EY703217; Name=EY703217; organism=Citrus sinensis; type=EST; length=913bp
TGTCTCGACCCACGCGTCCGGATAATATCATTCGCAAAACTGGCATTAAG
GGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGACAA
ATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGCCTC
TTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAAT
ATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGA
TATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAA
TAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAGTTG
GAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATATTCC
TCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAAGCA
GATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACC
GTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGG
CTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGG
ATCCAGTAGATGTGGCTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCA
ACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAAATGGCATGGCTCA
AGATCTTTCATGGAAAGGACCAGCTAAGAAATGGGAGGAGACCCTACTTA
ACCTGGAAAGTGCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCT
CCTCTTGCCAAAGGAAATGTGGCCACTCCTTGATCGANGCTACAAAATCT
CCACTTTTATTTTGGGACCGCAACATGTTCCTGTAATTCTCCACAACCCC
AGATATTACTTAG
back to top