EY703210

Overview
NameEY703210
Unique NameEY703210
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 63/217 (29.03%), Postives = 90/217 (41.47%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGT--ITYGG-----------YSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAK-AMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  KVTH G+CH+D   +  +    ++P+V GHE  GVV EVG  V+  K GD V +      C  C+ C     N C  V  T       DGT   +Y G           +S+  V  E  + +I   A  +    L C   T    +       PG  V V  LG +    V+ A+ A   +   I T+P KK +   R GA   +   D ++
Sbjct:   29 EVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHV-IPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNP-KKFDLARRFGATDCINPNDYDK 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 63/217 (29.03%), Postives = 90/217 (41.47%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGT--ITYGG-----------YSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAK-AMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  KVTH G+CH+D   +  +    ++P+V GHE  GVV EVG  V+  K GD V +      C  C+ C     N C  V  T       DGT   +Y G           +S+  V  E  + +I   A  +    L C   T    +       PG  V V  LG +    V+ A+ A   +   I T+P KK +   R GA   +   D ++
Sbjct:   29 EVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHV-IPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNP-KKFDLARRFGATDCINPNDYDK 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 63/217 (29.03%), Postives = 90/217 (41.47%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGT--ITYGG-----------YSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAK-AMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  KVTH G+CH+D   +  +    ++P+V GHE  GVV EVG  V+  K GD V +      C  C+ C     N C  V  T       DGT   +Y G           +S+  V  E  + +I   A  +    L C   T    +       PG  V V  LG +    V+ A+ A   +   I T+P KK +   R GA   +   D ++
Sbjct:   29 EVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHV-IPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNP-KKFDLARRFGATDCINPNDYDK 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL6 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6 GN=frmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 64/217 (29.49%), Postives = 90/217 (41.47%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGT--ITYGG-----------YSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAK-AMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  KVTH G+CH+D   +  +    ++P+V GHE  GVV EVG  V+  K GD V +      C  C+ C     N C  V  T       DGT   +Y G           +S+  V  E  + +I   A  +    L C   T    +       PG  V V  LG +    V+ A+ A   +   I T+P KK E   R GA   +   D ++
Sbjct:   29 EVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHV-IPLYTEXCGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNP-KKFELARRFGATDCINPNDYDK 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 63/217 (29.03%), Postives = 90/217 (41.47%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGT--ITYGG-----------YSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAK-AMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  KVTH G+CH+D   +  +    ++P+V GHE  GVV EVG  V+  K GD V +      C  C+ C     N C  V  T       DGT   +Y G           +S+  V  E  + +I   A  +    L C   T    +       PG  V V  LG +    V+ A+ A   +   I T+P KK +   R GA   +   D ++
Sbjct:   29 EVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHV-IPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNP-KKFDLARRFGATDCINPNDYDK 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 63/217 (29.03%), Postives = 90/217 (41.47%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGT--ITYGG-----------YSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAK-AMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  KVTH G+CH+D   +  +    ++P+V GHE  GVV EVG  V+  K GD V +      C  C+ C     N C  V  T       DGT   +Y G           +S+  V  E  + +I   A  +    L C   T    +       PG  V V  LG +    V+ A+ A   +   I T+P KK +   R GA   +   D ++
Sbjct:   29 EVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHV-IPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNP-KKFDLARRFGATDCINPNDYDK 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 63/217 (29.03%), Postives = 90/217 (41.47%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGT--ITYGG-----------YSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAK-AMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  KVTH G+CH+D   +  +    ++P+V GHE  GVV EVG  V+  K GD V +      C  C+ C     N C  V  T       DGT   +Y G           +S+  V  E  + +I   A  +    L C   T    +       PG  V V  LG +    V+ A+ A   +   I T+P KK +   R GA   +   D ++
Sbjct:   29 EVLIKVTHTGVCHTDAFTLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHV-IPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNP-KKFDLARRFGATDCINPNDYDK 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: FADH_PICPA (S-(hydroxymethyl)glutathione dehydrogenase OS=Pichia pastoris GN=FLD1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13
Identity = 57/209 (27.27%), Postives = 81/209 (38.76%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-SKYHDGTITY-------------GGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAKAMGVKGTVISTSPSKKSEAGERLGADSFL 762
            +V  KV   G+CH+D + +        +P+V GHE  GVV  VG  V   KVGD V V      CR C  C     N C K+  T       DGT  +               +S   V  +  VV++ + AP D T  L C   T Y           G  +GV   G +    ++ A + G    ++      K    ++ GA  F+
Sbjct:   36 EVRVKVEFTGVCHTDAYTLSGADAEGSFPVVFGHEGAGVVESVGEGVESVKVGDSV-VLLYTPECRECKFCLSGKTNLCGKIRATQGKGLLPDGTSRFRCKGKDLFHYMGCSSFSQYTVVADISVVKVQDEAPKDKTCLLGCGVTTGYGAAINTAKISKGDKIGVFGAGCIGLSVIQGAVSKGASEIIVIDINDSKKAWADQFGATKFV 243          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13
Identity = 63/223 (28.25%), Postives = 96/223 (43.05%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV--IMTYASK------------------YH-DGTITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAKAMGVKGTVISTSPSKKSEAGERLGADSFLVXRDQNR 783
            +V  ++    +CH+D  +I +++    +P++ GHE  G+V  +G  V+  K GDKV +      CR C  C   L N C K+  + + AS                   YH  GT T+  Y  T+V+D + + +I + A L+    L C   T Y          PG    V  LGG+   AV   KA G    +     S+K    + LGA   L  RD ++
Sbjct:   36 EVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKV-IPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQY--TVVSDIN-LAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHK 254          
BLAST of EY703210 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 62/205 (30.24%), Postives = 85/205 (41.46%), Query Frame = 1
Query:  178 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAS-KYHDGT-------------ITYGGYSDTMVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDXPGMHVGVVRLGGLSHVAVKFAKAMGVKGTVISTSPSKKSEAGERLGA 750
            +V  K+   GIC SD H+I   +   + P+V GHE  GVV  VG  V+  K GDKV +   V  C  C SC     N C    ++ A+    DGT             I+   +++  V  E+ VV+I   APL+    + C   T Y          PG    V  LGG+   AV   KA G    +       K    + +GA
Sbjct:   35 EVRIKILATGICRSDDHVISGAFKMPL-PMVLGHEAAGVVESVGEGVTCVKPGDKV-IPLFVPQCGKCSSCRSTRGNLCTSNDLSAATGLMPDGTSRFTCKGKSLHHFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGA 237          
The following BLAST results are available for this feature:
BLAST of EY703210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
FRMA_SHISS7.039e-1329.03S-(hydroxymethyl)glutathione dehydrogenase OS=Shig... [more]
FRMA_ECOLI7.039e-1329.03S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOLC7.039e-1329.03S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOL67.039e-1329.49S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECOHS7.039e-1329.03S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO577.039e-1329.03S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FRMA_ECO247.039e-1329.03S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
FADH_PICPA9.193e-1327.27S-(hydroxymethyl)glutathione dehydrogenase OS=Pich... [more]
ADH4_HUMAN9.193e-1328.25Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADH1A_UROHA1.201e-1230.24Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-017-A12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703210 ID=EY703210; Name=EY703210; organism=Citrus sinensis; type=EST; length=829bp
CCACGCGTCCGCTGGACGTCAAACTAAGCCAACAAGCACCAATATCATTA
AATTCATTCTGAAATGGGGCAAGCACCGGAGCAAGAGCACCCTAAGAACG
CCTTTGGATGGGCTGCCAGGGACACTTCTGGCGTTCTCTCCCCCTTTCAC
TTCTCCAGAAGAGCAACGGGAGAGAAGGATGTGACATTCAAAGTAACTCA
CTGTGGGATATGCCATTCAGATCTTCACTTGATCAAAAATGAATGGGGCA
ATGCCATTTACCCAATCGTCCCCGGACATGAGATTGTGGGCGTAGTGACA
GAGGTCGGAAGCAAAGTGAGTAAATTCAAAGTCGGAGACAAAGTGGGAGT
AGGATGCATGGTGGGATCATGCCGCTCTTGTGATAGCTGCGCCATTGATC
TTGAGAACTACTGCCCCAAAGTTATAATGACCTATGCCAGCAAGTACCAT
GATGGAACCATCACATACGGAGGCTACTCTGACACTATGGTTGCCGATGA
GCACTTTGTGGTCCGTATTCCTGAAGGCGCACCACTTGACGCCACTGCCC
CTCTCCTCTGTGCTGGTATCACAGTCTACAGTCCGTTGAGATTCTATGGA
CTCGACNAGCCTGGTATGCATGTGGGTGTTGTCCGCTTGGGCGGTCTAAG
CCATGTCGCTGTCAAATTCGCAAAGGCTATGGGGGTTAAGGGGACTGTGA
TCAGTACCTCCCCTAGCAAGAAGAGTGAAGCCGGTGAACGTCTTGGCGCT
GATTCCTTTTTGGTCANTCGTGATCAAAATAGATGCAGGCTGCAATGGGC
ACCATGATGGGATCATCGATACCAGATCT
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