EY703182

Overview
NameEY703182
Unique NameEY703182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY703182 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.739e-11
Identity = 46/141 (32.62%), Postives = 74/141 (52.48%), Query Frame = 1 
Query:  337 NVVGHGGFGLVYRGVLSNGRKVAIKLM------DQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCRPPVIHRDFKSSNILLD 738
            N    G    +YRG+    R VA+K++      ++   + E +FK EV LL RL  P ++  +  C       ++ +YM+ G L+ +L     +      L  ET LR+AL+ ++G+E+LH      VIHRD KS+N+LL+
Sbjct:   90 NKFASGAHSRIYRGIYKQ-RAVAVKMVRIPTHKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYL-----NKKEPYSLSIETVLRLALDISRGMEYLHSQ---GVIHRDLKSNNLLLN 221
The following BLAST results are available for this feature:
BLAST of EY703182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 291
Match NameE-valueIdentityDescription
HT1_ARATH9.739e-1132.62Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-016-G08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703182 ID=EY703182; Name=EY703182; organism=Citrus sinensis; type=EST; length=897bp
AACCTTATTCAACCCTCCATTTCTCTCTCTTTGCTTCTTATTCTTCCATT
CTCGTAATAAACAGAAATGGAAGGAGACGATGAGTACAGAAGAAAAGAGC
GCGTTGCCTTGGTGGTTATTGTGGTGGTTGCTTCACTAGCCTTGGCTTCT
TTGCTCGTCGCTTTTAGCTACTACTGCTACATACGTAACAAGGTCTCTAA
GCGCTTAAATACCCCCAAAAGAGTTGATCGTGAGGAGAAAGGTGAGTCGG
GAAAATTGGAGGTTACTACTGATAATGGACTTCAGGTGTTCACTTTCAAG
CAGCTGCATTCAGCTACTGGTGGTTTCAGCAAGTCGAATGTGGTTGGGCA
CGGTGGTTTTGGGTTAGTGTACCGGGGAGTGCTTAGTAATGGGAGGAAAG
TTGCAATTAAGTTGATGGATCAAGCAGGAAAGCAGGGAGAAGATGAATTT
AAGATGGAGGTGGAGTTGCTTGGTCGGCTACGGTCACCATATTTGCTGGC
TCTGCTTGGATATTGTTCTGATCGTCGTAAATTGCTTGTGTATGATTACA
TGGCAAATGGTGGCCTACAAGAACATCTGTATCCCGCGAATGGTTCCAAC
TCAGTTGCCTCCAAATTGGACTGGGAAACCCGACTTAGAATAGCTCTTGA
AGCTGCTAAAGGTTTGGAATTTCTCCATGAGCATTGTAGACCCCCTGTGA
TTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGACAAAATTTCCATG
CCAAAGTTNCTGATTTTGGTTTGGNCANGATTGGGATCTGACAAGCTGGT
GGGACATGTTTCACTCGAGTCTTGGGACCCAGGGATATGNTGCTCCTGAG
ATGCATTACTGGGGCATCTACACAAATCAGACGTTAATAGTATGGGG
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