EY703166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.747e-24 Identity = 64/191 (33.51%), Postives = 90/191 (47.12%), Query Frame = 3 Query: 78 SVLSSSKSKFFTAVSL-------PAAANATSKYAMSAD-----WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQR--------SMEKDP---------EKKKYPGGA-FDPLGF 560 S++ ++K+ F L P + + + A++AD W PG P +LDGS PGDFGFDPL LG PE+L+ ++EL+H RWAML GI +PE L + W G+ Y + T+ VIE + I + E +R + DP YPGG FDPLG+ Sbjct: 25 SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSW--YTAGEQEYFTDTT------TLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGW 207 HSP 2 Score: 42.3578 bits (98), Expect = 1.747e-24 Identity = 20/65 (30.77%), Postives = 34/65 (52.31%), Query Frame = 1 Query: 553 WASPRPPEVRGIQSQGDKKWAFGIVGICGFLRATSAYPGTGPLENXXTHLADPWHNTLGDVLSPE 747 W S P +++ ++++ K ++ + G Y GTGP++N HLADP H T+ SP+ Sbjct: 207 WGSGSPAKIKELRTKEIKNGRLAMLAVMGAW-FQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.970e-24 Identity = 68/207 (32.85%), Postives = 87/207 (42.03%), Query Frame = 3 Query: 15 SSPKMASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADWMPGEPR-----------PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 SS ++S TL + T+A PS ++F S T K A S G R P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 4 SSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSA-----TTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLG 201 HSP 2 Score: 51.2174 bits (121), Expect = 2.970e-24 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+KNGRLA+ + GF VQ Sbjct: 193 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 233 HSP 3 Score: 27.7202 bits (60), Expect = 2.970e-24 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HL+DP +N Sbjct: 238 GKGPLENLADHLSDPVNN 255
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.970e-24 Identity = 51/137 (37.23%), Postives = 65/137 (47.45%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + +E R DP YPGG+FDPLG Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDP---LYPGGSFDPLG 200 HSP 2 Score: 51.9878 bits (123), Expect = 2.970e-24 Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKEIKNGRLA+ + GF VQ Sbjct: 192 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232 HSP 3 Score: 27.7202 bits (60), Expect = 2.970e-24 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPL+N HLADP +N Sbjct: 237 GKGPLDNLVDHLADPVNN 254
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.970e-24 Identity = 52/137 (37.96%), Postives = 65/137 (47.45%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLG 200 HSP 2 Score: 50.8322 bits (120), Expect = 2.970e-24 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL +DP+ F E KVK IKNGRLA+ + GF VQ Sbjct: 192 PGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQ 232 HSP 3 Score: 28.8758 bits (63), Expect = 2.970e-24 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 237 GKGPLENLADHLADPVNN 254
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.970e-24 Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 171 WMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLSIAFVEHQRSMEKDPEKKK---------YPGGAFDPLGF 560 W+PG P YLDGS GD GFDPL L E PE+L + ++++++ RWAML V G+L+PE L + A EW +PG + + + + +E +++ S+ +DP K YPG F+PL F Sbjct: 36 WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNF 174 HSP 2 Score: 39.6614 bits (91), Expect = 2.970e-24 Identity = 18/40 (45.00%), Postives = 24/40 (60.00%), Query Frame = 1 Query: 622 IVGICGFLRATSAYPGTGPLENXXTHLADPWHNTLGDVLS 741 ++ GFL + + G GP EN HLADPWHNT+ +S Sbjct: 191 MLAFLGFLVQHNVH-GKGPFENLQQHLADPWHNTIIQTIS 229
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.971e-24 Identity = 66/206 (32.04%), Postives = 92/206 (44.66%), Query Frame = 3 Query: 27 MASNTLMSCGIATTAFPSVLSSSKSKFF----------TAVSLPAAANATSKYA----MSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 MAS+T+ +++TAF + S F A + PAA++ + Y + + GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP + ++ I + + + +E R DP YPGG FDPLG Sbjct: 1 MASSTM---ALSSTAFAGKAVNVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDP---LYPGGTFDPLG 198 HSP 2 Score: 50.0618 bits (118), Expect = 2.971e-24 Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F + KVKE+KNGRLA+ + GF VQ Sbjct: 190 PGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQ 230 HSP 3 Score: 28.8758 bits (63), Expect = 2.971e-24 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 235 GKGPLENLADHLADPVNN 252
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.853e-24 Identity = 52/137 (37.96%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPE-------ALGLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE G W++A GG YLGNP V ++ I + L + VE R + DP YPGG+FDPLG Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDP---LYPGGSFDPLG 200 HSP 2 Score: 50.447 bits (119), Expect = 3.853e-24 Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL +DP+ F E KVKE KNGRLA+ + GF +Q Sbjct: 192 PGGSFDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFIQ 232 HSP 3 Score: 27.335 bits (59), Expect = 3.853e-24 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HL DP +N Sbjct: 237 GKGPLENLADHLVDPVNN 254
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.001e-24 Identity = 51/137 (37.23%), Postives = 64/137 (46.72%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPE-------ALGLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLG 199 HSP 2 Score: 51.9878 bits (123), Expect = 5.001e-24 Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKEIKNGRLA+ + GF VQ Sbjct: 191 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 231 HSP 3 Score: 28.8758 bits (63), Expect = 5.001e-24 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 236 GKGPLENLADHLADPVNN 253
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.498e-24 Identity = 54/141 (38.30%), Postives = 67/141 (47.52%), Query Frame = 3 Query: 180 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 53 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---IYPGGSFDPLG 188 HSP 2 Score: 51.2174 bits (121), Expect = 6.498e-24 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+KNGRLA+ + GF VQ Sbjct: 180 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 220 HSP 3 Score: 28.8758 bits (63), Expect = 6.498e-24 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 225 GKGPLENLADHLADPVNN 242
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.416e-24 Identity = 52/138 (37.68%), Postives = 66/138 (47.83%), Query Frame = 3 Query: 180 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLG 557 G P P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R + E YPGG+FDPLG Sbjct: 63 GSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLG 198 HSP 2 Score: 51.2174 bits (121), Expect = 8.416e-24 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+KNGRLA+ + GF VQ Sbjct: 190 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 230 HSP 3 Score: 26.5646 bits (57), Expect = 8.416e-24 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 1 Query: 667 GTGPLENXXTHLADP 711 G GP+EN HLADP Sbjct: 235 GKGPIENLSDHLADP 249 The following BLAST results are available for this feature:
BLAST of EY703166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703166 ID=EY703166; Name=EY703166; organism=Citrus sinensis; type=EST; length=913bpback to top |