EY703166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.416e-23 Identity = 54/140 (38.57%), Postives = 65/140 (46.43%), Query Frame = 3 Query: 183 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 E P YL G PGD+G+D L PE R +E E+IH RWAML G PE L G W +A GG YLGNP + ++ I + + + FVE R DP YPGGAFDPLG Sbjct: 63 EQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGG-LDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDP---LYPGGAFDPLG 198 HSP 2 Score: 51.2174 bits (121), Expect = 1.416e-23 Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP F E KVKE+KNGRLA+ + GF VQ Sbjct: 190 PGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQ 230 HSP 3 Score: 24.6386 bits (52), Expect = 1.416e-23 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GP++N H+ADP N Sbjct: 235 GKGPIQNLYDHVADPVAN 252
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.416e-23 Identity = 52/140 (37.14%), Postives = 65/140 (46.43%), Query Frame = 3 Query: 183 EPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 E P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + +E R DP YPGGAFDPLG Sbjct: 62 EQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGG-LDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDP---LYPGGAFDPLG 197 HSP 2 Score: 52.373 bits (124), Expect = 1.416e-23 Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKEIKNGRLA+ + GF VQ Sbjct: 189 PGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 229 HSP 3 Score: 26.1794 bits (56), Expect = 1.416e-23 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GP+EN H+ADP N Sbjct: 234 GKGPIENLADHIADPVAN 251
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.417e-23 Identity = 53/141 (37.59%), Postives = 67/141 (47.52%), Query Frame = 3 Query: 180 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP + ++ I + + + VE R DP YPGG+FDPLG Sbjct: 60 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLG 195 HSP 2 Score: 51.2174 bits (121), Expect = 1.417e-23 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+KNGRLA+ + GF VQ Sbjct: 187 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 227 HSP 3 Score: 28.1054 bits (61), Expect = 1.417e-23 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN H+ADP +N Sbjct: 232 GKGPLENLADHIADPVNN 249
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.836e-23 Identity = 51/137 (37.23%), Postives = 64/137 (46.72%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 70 PSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLG 202 HSP 2 Score: 51.2174 bits (121), Expect = 1.836e-23 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+KNGRLA+ + GF VQ Sbjct: 194 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 234 HSP 3 Score: 28.8758 bits (63), Expect = 1.836e-23 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 239 GKGPLENLADHLADPVNN 256
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.836e-23 Identity = 50/137 (36.50%), Postives = 63/137 (45.99%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPE-------ALGLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G P D+G+D L PE + +E E+IHCRWAML G + PE G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLG 200 HSP 2 Score: 52.7582 bits (125), Expect = 1.836e-23 Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL +DP+ F E KVKEIKNGRLA+ + GF VQ Sbjct: 192 PGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 232 HSP 3 Score: 28.8758 bits (63), Expect = 1.836e-23 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 237 GKGPLENLADHLADPVNN 254
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.841e-23 Identity = 50/137 (36.50%), Postives = 64/137 (46.72%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSME-----KDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L P+ RY+E ELIH RWA+L GIL PE L G W +A GG YLGN + ++ L ++ + + E R+ D YPGG FDPLG Sbjct: 51 PEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGG-LNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLG 186 HSP 2 Score: 50.447 bits (119), Expect = 1.841e-23 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 542 FRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 F PLGL DP F E KVKEIKNGRLA+ + +GF VQ Sbjct: 182 FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQ 218 HSP 3 Score: 25.409 bits (54), Expect = 1.841e-23 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GP++N HLADP N Sbjct: 223 GKGPVQNLTDHLADPTVN 240
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.133e-23 Identity = 53/141 (37.59%), Postives = 66/141 (46.81%), Query Frame = 3 Query: 180 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 GEP P YL G PGD+G+D L PE + +E E+IH WAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 4 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---IYPGGSFDPLG 139 HSP 2 Score: 51.2174 bits (121), Expect = 3.133e-23 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+KNGRLA+ + GF VQ Sbjct: 131 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 171 HSP 3 Score: 28.8758 bits (63), Expect = 3.133e-23 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 176 GKGPLENLADHLADPVNN 193
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.007e-23 Identity = 52/137 (37.96%), Postives = 64/137 (46.72%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL+G GD+G+D L PE R +E E+IH RWAML G L PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 69 PSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDP---IYPGGSFDPLG 201 HSP 2 Score: 51.2174 bits (121), Expect = 4.007e-23 Identity = 25/41 (60.98%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP F E KVKEIKNGRLA+ + GF VQ Sbjct: 193 PGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQ 233 HSP 3 Score: 27.7202 bits (60), Expect = 4.007e-23 Identity = 12/18 (66.67%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP N Sbjct: 238 GKGPLENLNDHLADPVAN 255
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.011e-23 Identity = 53/141 (37.59%), Postives = 67/141 (47.52%), Query Frame = 3 Query: 180 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP + ++ I + + + VE R DP YPGG+FDPLG Sbjct: 61 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDP---IYPGGSFDPLG 196 HSP 2 Score: 51.2174 bits (121), Expect = 4.011e-23 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+KNGRLA+ + GF VQ Sbjct: 188 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQ 228 HSP 3 Score: 26.1794 bits (56), Expect = 4.011e-23 Identity = 11/18 (61.11%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLA P +N Sbjct: 233 GKGPLENLADHLAGPVNN 250
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.122e-23 Identity = 69/206 (33.50%), Postives = 94/206 (45.63%), Query Frame = 3 Query: 27 MASNTLMSCGIATTAFPSVLSSSKSKFF----------TAVSLPAAANATSKYA----MSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 MAS+T+ +++TAF + S F A + PAAA+ + Y + + GEP P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L G W +A GG YLGNP + ++ I + + + VE R DP YPGG+FDPLG Sbjct: 1 MASSTM---ALSSTAFAGKAVNVPSSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLG 198 HSP 2 Score: 50.0618 bits (118), Expect = 4.122e-23 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E KVKE+K GRLA+L+ GF VQ Sbjct: 190 PGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQ 230 The following BLAST results are available for this feature:
BLAST of EY703166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703166 ID=EY703166; Name=EY703166; organism=Citrus sinensis; type=EST; length=913bpback to top |