EY703166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.199e-23 Identity = 51/137 (37.23%), Postives = 65/137 (47.45%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ +I + + + VE R DP YPGG+FDPLG Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDP---LYPGGSFDPLG 197 HSP 2 Score: 50.0618 bits (118), Expect = 5.199e-23 Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL +DP++ E KVKE+KNGRLA+ + GF VQ Sbjct: 189 PGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQ 229 HSP 3 Score: 28.8758 bits (63), Expect = 5.199e-23 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 234 GKGPLENLADHLADPVNN 251
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.979e-23 Identity = 56/143 (39.16%), Postives = 69/143 (48.25%), Query Frame = 3 Query: 174 MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 + GEP P YL G PGD+G+D L PE + +E E+IHCRWAML G + PE L G W +A GG YLGNP V +L I + + + VE R DP YPGG+FDPLG Sbjct: 62 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDP---LYPGGSFDPLG 199 HSP 2 Score: 50.8322 bits (120), Expect = 6.979e-23 Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL + PQ F E KVKEIKNGRLA+ + GF VQ Sbjct: 191 PGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQ 231
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 8.761e-23 Identity = 47/135 (34.81%), Postives = 65/135 (48.15%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL--------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE ++Y+E E+IH RWA+L GIL PE L G W +A GG YLG+P + + L ++ + + +E R + YPG +FDPLG Sbjct: 56 PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGG-LDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLG 189 HSP 2 Score: 50.0618 bits (118), Expect = 8.761e-23 Identity = 25/41 (60.98%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP F E KVKEIKNGRLA+ + GF VQ Sbjct: 181 PGESFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQ 221 HSP 3 Score: 26.1794 bits (56), Expect = 8.761e-23 Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GP++N HLADP N Sbjct: 226 GKGPIQNLADHLADPGTN 243
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.468e-22 Identity = 61/196 (31.12%), Postives = 84/196 (42.86%), Query Frame = 3 Query: 15 SSPKMASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 SS K +N L+ G A + + K A S+ + + + GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG+P + ++ I + + + +E R DP YPGG FDPLG Sbjct: 22 SSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFS-GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG-LDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDP---IYPGGNFDPLG 211 HSP 2 Score: 50.447 bits (119), Expect = 1.468e-22 Identity = 24/37 (64.86%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 542 FRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 F PLGL DP F E KVKEIKNGRLA+ + GF VQ Sbjct: 207 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQ 243 HSP 3 Score: 28.1054 bits (61), Expect = 1.468e-22 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GP+EN HLADP +N Sbjct: 248 GKGPIENLADHLADPVNN 265
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.480e-22 Identity = 62/193 (32.12%), Postives = 82/193 (42.49%), Query Frame = 3 Query: 15 SSPKMASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR---SMEKDPEKKKYPGGAFDPLG 557 +S K T + G T A + SS +F+ P A Y+ +A P YL G PGD+G+D L PE +RY+E ELIH RWAML G PE L G W +A GG YLGNP V + ++ + + +E R + YPG +FDPLG Sbjct: 6 ASRKALQVTCKATGKKTAAKAAAPKSSGVEFYG----PNRAKWLGPYSENAT-------PAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGG-LDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLG 186 HSP 2 Score: 49.2914 bits (116), Expect = 2.480e-22 Identity = 25/41 (60.98%), Postives = 26/41 (63.41%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP F E KVKEIKNGRLA + GF VQ Sbjct: 178 PGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQ 218 HSP 3 Score: 23.483 bits (49), Expect = 2.480e-22 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GP++N HLA+P N Sbjct: 223 GKGPVQNLDDHLANPTVN 240
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.152e-22 Identity = 61/196 (31.12%), Postives = 84/196 (42.86%), Query Frame = 3 Query: 15 SSPKMASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADWMPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 SS K +N L+ G A + + + A S+ + + M GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLG+P + ++ I + + + +E R DP YPGG FDPLG Sbjct: 22 SSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDR-VMYLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGG-LDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDP---IYPGGNFDPLG 211 HSP 2 Score: 49.2914 bits (116), Expect = 4.152e-22 Identity = 23/37 (62.16%), Postives = 26/37 (70.27%), Query Frame = 2 Query: 542 FRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 F PLGL DP F + KVKEIKNGRLA+ + GF VQ Sbjct: 207 FDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQ 243 HSP 3 Score: 28.1054 bits (61), Expect = 4.152e-22 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GP+EN HLADP +N Sbjct: 248 GKGPIENLADHLADPVNN 265
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.395e-22 Identity = 67/202 (33.17%), Postives = 88/202 (43.56%), Query Frame = 3 Query: 30 ASNTLMSCGIATTAFPSVLSSSKSKFFTAVSLPAAANATSKYAMSADW-----------MPGEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 A+ L S A A ++ SSS+ + VS+ A AT K + + W GE P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W + GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 4 ATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTA-ATKK--VGSPWYGPDRVKYLGPFSGES-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGG-LQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGSFDPLG 197 HSP 2 Score: 48.9062 bits (115), Expect = 5.395e-22 Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL D + F E KVKEIKNGRLA+ + GF VQ Sbjct: 189 PGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQ 229 HSP 3 Score: 28.8758 bits (63), Expect = 5.395e-22 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 234 GKGPLENLADHLADPVNN 251
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 5.395e-22 Identity = 48/137 (35.04%), Postives = 62/137 (45.26%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPE-------ALGLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L P + ++ E+IHCRW ML G + PE G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGG-LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGSFDPLG 199 HSP 2 Score: 50.447 bits (119), Expect = 5.395e-22 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PLGL DP+ F E +VKEIKNGRLA+ + GF VQ Sbjct: 191 PGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFVQ 231 HSP 3 Score: 28.8758 bits (63), Expect = 5.395e-22 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 236 GKGPLENLADHLADPVNN 253
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.436e-22 Identity = 51/137 (37.23%), Postives = 64/137 (46.72%), Query Frame = 3 Query: 192 PPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLG 557 P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G W +A GG YLGNP V ++ I + + + VE R DP YPGG+FDPLG Sbjct: 29 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGG-LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLG 161 HSP 2 Score: 46.595 bits (109), Expect = 5.436e-22 Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCV 649 P F PLGL + P+ F E KVKE+KNGRLA+ + GF V Sbjct: 153 PGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFV 192 HSP 3 Score: 28.8758 bits (63), Expect = 5.436e-22 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLADP +N Sbjct: 198 GKGPLENLADHLADPVNN 215
BLAST of EY703166 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.025e-22 Identity = 51/140 (36.43%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 180 GEPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEAL-------GLGNWVQAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPL 554 GEP P YL G PGD+G+D L PE + +E E+IH RWAML G + PE L G +W +A GG YLGN + ++ I + + + VE R DP YPGG+FDPL Sbjct: 43 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGG-LDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDP---IYPGGSFDPL 177 HSP 2 Score: 49.6766 bits (117), Expect = 7.025e-22 Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 2 Query: 530 PRWCFRPLGLLQDPQKFEEYKVKEIKNGRLALLAFVGFCVQ 652 P F PL L DP+ F E KVKEIKNGRLA+ + GF VQ Sbjct: 170 PGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQ 210 HSP 3 Score: 27.335 bits (59), Expect = 7.025e-22 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = 1 Query: 667 GTGPLENXXTHLADPWHN 720 G GPLEN HLA+P +N Sbjct: 215 GKGPLENLADHLAEPVNN 232 The following BLAST results are available for this feature:
BLAST of EY703166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >EY703166 ID=EY703166; Name=EY703166; organism=Citrus sinensis; type=EST; length=913bpback to top |