EY703057

Overview
NameEY703057
Unique NameEY703057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703057 vs. ExPASy Swiss-Prot
Match: NACB_DEBHA (Nascent polypeptide-associated complex subunit beta OS=Debaryomyces hansenii GN=EGD1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16
Identity = 55/157 (35.03%), Postives = 81/157 (51.59%), Query Frame = 3
Query:   72 PSSKMNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQK-QAPNAGTGAPTTQEDDDDEVPELVAGETFE 536
            P     + KL K + A + GG     R K   +  T  DD +L   L ++    I  IEE N FK+D  V+ F    VQ +   NT+ ++G PQ K +  ++P I+ QLG +NL+ LRKLAEQ Q  + P    G     E+D   +P+L+ G+ F+
Sbjct:    2 PVDPEKLAKLQKASVAKKVGGS----RVKAKKNVKTEQDDTKLIEALGKLKAQKIEGIEEANFFKEDGKVLHFNRVGVQGAAQHNTFALTGYPQEKDVTQLIPQILPQLGAENLEILRKLAEQIQAGKNPELNAGGAEGAEED---IPDLIEGQKFD 151          
BLAST of EY703057 vs. ExPASy Swiss-Prot
Match: NACB_PICGU (Nascent polypeptide-associated complex subunit beta OS=Pichia guilliermondii GN=EGD1 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 51/151 (33.77%), Postives = 81/151 (53.64%), Query Frame = 3
Query:   93 EKLMKMA-GAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQK-QAPNAGTGAPTTQEDDDDEVPELVAGETFE 536
            EKL K+  GA +  G   V+ KK    +    DD +L   L ++    + A+EE N FK+D  V+ F    VQ++   N    +G PQ K +  ++P I+ QLG +NL+ LR+LAEQ Q  + P+ G          D+++P+L+ G+ F+
Sbjct:    6 EKLAKLQQGAAKKVGGQRVKAKKVKSEQ----DDTKLMEALGKLKATKVNAVEEANFFKEDGKVLHFKRVGVQSAAQHNVCAFTGYPQEKDVTQLIPQILPQLGAENLEILRQLAEQIQAGKTPSMG----GENAGADEDIPDLIEGQKFD 148          
BLAST of EY703057 vs. ExPASy Swiss-Prot
Match: NACB_CANAL (Nascent polypeptide-associated complex subunit beta OS=Candida albicans GN=EGD1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = 3
Query:   93 EKLMKM--AGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ--KQAPNAGTGAPTTQED-DDDEVPELV 518
            EKL K+  + A + GG     R K   +  T  DD +L   L ++    I  +EE N F++D  V+ F    VQ + A+NT+  +G PQ K +  ++P I+ QLG +NL+ LR+LAEQ Q  K   +  TG+     D   +++P+LV
Sbjct:    6 EKLAKLQKSSAKKVGGS----RVKAKKNIKTEQDDTKLIEALGKLKATKIEGVEEANFFREDGKVLHFNRVGVQGAPASNTFAFTGYPQEKNITQLIPQILPQLGAENLEILRQLAEQIQAGKTPKDFNTGSANAAADAGGEDIPDLV 149          
The following BLAST results are available for this feature:
BLAST of EY703057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
NACB_DEBHA7.488e-1635.03Nascent polypeptide-associated complex subunit bet... [more]
NACB_PICGU9.154e-1433.77Nascent polypeptide-associated complex subunit bet... [more]
NACB_CANAL1.561e-1335.14Nascent polypeptide-associated complex subunit bet... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-015-D02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703057 ID=EY703057; Name=EY703057; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGAACAAAAACTAAAGGGCTCTTATCTTCTTCTTCCCAAAT
TCTTTGTCCCCACACAAAAACCCTAGCTCCAAGATGAATGTGGAGAAGCT
AATGAAGATGGCCGGTGCAGTTCGCACCGGTGGTAAGGGTAGTGTGAGAA
GAAAGAAGAAGGCTGTTCATAAGACAACAACCACCGATGACAAGAGGCTT
CAGAGCACCTTGAAGAGAATAGGAGTGAATGCTATTCCTGCAATTGAGGA
AGTTAACATTTTCAAGGATGACGTCGTTATTCAGTTCTTAAATCCCAAAG
TACAAGCTTCAATTGCTGCCAACACATGGGTAGTTAGTGGTGCCCCACAA
ACCAAGAAGTTGCAGGATATTCTCCCTGGAATTATCAATCAATTGGGGCC
AGATAATTTGGACAACCTGAGGAAGTTGGCGGAGCAGTTTCAGAAGCAAG
CACCTAATGCAGGAACTGGTGCACCCACGACTCAGGAGGACGACGACGAT
GAGGTCCCAGAGCTTGTGGCAGGCGAGACGTTTGAAGCTGCCGCAGAGGA
TAATCCTGAGAACCTGACCCTGCTTCTTAGAAATTGTATCTAGAGGGACT
TTGTGGTATTCAATATATTTTCTATGGTTTTTGAGGTTTTATTTTTCTTT
TTCGAGGCGACTTTCTCTTGGTTTTTCTGAATCCCCCTGGGGACACTAAA
AATGAGTACGTTTTAATTGAATGTTCTGGCTCCGGGGGAGACCGTGGAAG
GCCCTTTTCTCTTTCGGAATCCGGAAGCGCTGGTGCGATTGGCTTCCTAT
GGAGACTTTTGTTATTAAGCTTAGTTGTGGAGGCTCGGGTTATCCTCCCT
GGAAACAGCGGCTCAGATTTGTTCGTGGTGATGG
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