EY703053

Overview
NameEY703053
Unique NameEY703053
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: 4CLL9_ORYSJ (4-coumarate--CoA ligase-like 9 OS=Oryza sativa subsp. japonica GN=4CLL9 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.379e-18
Identity = 58/187 (31.02%), Postives = 88/187 (47.06%), Query Frame = 2
Query:  131 IFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGD-VYTYGEVEQTARKIASGLNKLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQAKASGAKLIITKACYVDKVKDLEEVKIMCIDSPP-------DGCLHFSELTQADEKDLPHVEILPDDVVALPYSSGT 667
            +FRS+ P + +P  + +  +  +     A R  L+  + G   YTYGEV +   + A  L  +G+ +  V+++ LPN+  + +  LG    GA+ +  NP    AE  KQ + S AKL++      DKVKD     I   D          DG L  ++ T A    +P       D+ ALPYSSGT
Sbjct:   19 VFRSRFPPVAVPDGVTVPEFVLDGAEAYADRVALVEAAAGGRSYTYGEVARDTARFARALRSVGVRKGHVVVVALPNLAVYPVVSLGIMSAGAVFSGVNPRALAAEIKKQVEDSEAKLVVANEVAFDKVKDAGVPVIGVGDRERMPGAISWDGLLAAADRTGAGV--VPVDAAQQSDLCALPYSSGT 203          

HSP 2 Score: 29.6462 bits (65), Expect = 3.379e-18
Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 1
Query:  649 PVLVGDTGLPKGVMLTHKGLVTSVAQQV 732
            P   G TG+ KGVML+H+ LV+++   +
Sbjct:  198 PYSSGTTGVSKGVMLSHRNLVSNLCSSM 225          
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: 4CL3_DICDI (Probable 4-coumarate--CoA ligase 3 OS=Dictyostelium discoideum GN=4cl3 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.229e-16
Identity = 67/207 (32.37%), Postives = 98/207 (47.34%), Query Frame = 2
Query:  134 FRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVEQTARKIASGLNKLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQ-AKASGAKLIITKACYVDKVKDLEEV-----KIMCID--------------SPPDGCLHFSELTQADEKDLPHVEI-LPDDVVALPYSSGTQAYQRVSC 691
            F SK P+I IP+  P+     ++I     +  L++G T   Y+   V  T  K+A GLNKL I + DV+ ++LPN+PE+V  F G   +G I +  NP +T  E     A  S   L +T A Y     DL+ V     K++ +D              S     + F++LT  + KD P V I L  D   +P+SSGT    +  C
Sbjct:   11 FTSKYPNIIIPEK-PIPHLILKHIRYKPDQVLLVDGLTFKEYSSHFVADTIEKVACGLNKLNIKKGDVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLATVSPRYLAVTLAVYEKIKNDLKRVFPSVEKVILVDIAGQTLKEIDQLTLSSDGIVMSFNQLTNNNGKDYPIVRIDLTKDTAIIPFSSGTTGLFKGVC 216          
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: 4CL2_DICDI (Probable 4-coumarate--CoA ligase 2 OS=Dictyostelium discoideum GN=4cl2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.217e-16
Identity = 67/209 (32.06%), Postives = 98/209 (46.89%), Query Frame = 2
Query:  128 IIFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVEQTARKIASGLNKLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQ-AKASGAKLIITKACYVDKVKDLEEV-----KIMCID--------------SPPDGCLHFSELTQADEKDLPHVEI-LPDDVVALPYSSGTQAYQRVSC 691
            I F SK P+I IP+  P+     ++I     +  L++G T   Y+   V  T  K+A GLNKL I + DV+ ++LPN+PE+V  F G   +G I +  NP +T  E     A  S   L +T A Y     DL+ V     K++ +D              S     + F++L   + KD P V I L  D   +P+SSGT    +  C
Sbjct:    9 IYFTSKYPNIIIPEK-PIPHLILKHIRSKPDQVLLVDGLTFKEYSSHFVADTIEKVACGLNKLNIKKGDVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLATVSPRYLAVTLAVYEKIKNDLKRVFPSVEKVILVDIAGQTLKEIGQLTLSSDGIVMSFNQLINNNGKDYPIVRIDLKKDTAIIPFSSGTTGLFKGVC 216          
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: 4CL1_DICDI (Probable 4-coumarate--CoA ligase 1 OS=Dictyostelium discoideum GN=4cl1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.395e-16
Identity = 66/207 (31.88%), Postives = 97/207 (46.86%), Query Frame = 2
Query:  134 FRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVEQTARKIASGLNKLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQ-AKASGAKLIITKACYVDKVKDLEEV-----KIMCID--------------SPPDGCLHFSELTQADEKDLPHVEILP-DDVVALPYSSGTQAYQRVSC 691
            F SK P+I IP+  P+     ++I     +  L++G T   Y+   V  T  K+A GLNKL I + DV+ ++LPN+PE+V  F G   +G I +  NP +T  E     A  S   L +T A Y     DL+ V     K++ +D              S     + F++L   + KD P V I P  D   +P+SSGT    +  C
Sbjct:   11 FTSKYPNIIIPEK-PVPQLILKHIRSKPDQVLLVDGLTFKEYSSHFVADTIEKVACGLNKLNIKKGDVLGVILPNLPEYVPIFHGTLLMGGITSLVNPDYTIEELSHTLATVSPRYLAVTLAVYEKIKNDLKRVFPSVEKVILVDIAGQTLKEIDQLTLSSDGIVMSFNQLINNNGKDYPIVRIDPKKDTAIIPFSSGTTGLFKGVC 216          
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: 4CLL6_ARATH (4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana GN=4CLL6 PE=2 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.501e-14
Identity = 55/185 (29.73%), Postives = 83/185 (44.86%), Query Frame = 2
Query:  131 IFRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVEQTARKIASGL-NKLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQAKASGAKLIITKACYVDKVKDLEEVKIMCIDSPPDGCLH-----FSELTQADEKDLPHVEILPDDVVALPYSSGT 667
            I+ SK P +++P    L +       K      LI+  TG   ++ E++   + +A+G+ + LG+ Q DV+ L+LPN   F + FL    LGAI T  NP  +  E  KQ       L  T    V+K+  L    I   +S     +      F  + +     +P   I  DDV A+ YSSGT
Sbjct:   31 IYTSKFPSLHLPVDPNLDAVSALFSHKHHGDTALIDSLTGFSISHTELQIMVQSMAAGIYHVLGVRQGDVVSLVLPNSVYFPMIFLSLISLGAIVTTMNPSSSLGEIKKQVSECSVGLAFTSTENVEKLSSLGVSVISVSESYDFDSIRIENPKFYSIMKESFGFVPKPLIKQDDVAAIMYSSGT 215          

HSP 2 Score: 32.7278 bits (73), Expect = 5.501e-14
Identity = 23/70 (32.86%), Postives = 34/70 (48.57%), Query Frame = 1
Query:  661 GDTGLPKGVMLTHKGLVTSVAQQVDGENQTCTSPRDAILWGL---LCFQYALNPSCFGG*SWGSILIMRK 861
            G TG  KGV+LTH+ L+ S+   V  E      P  + ++     LC  Y L+    G  S GS +++ K
Sbjct:  214 GTTGASKGVLLTHRNLIASMELFVRFEASQYEYPGSSNVYLAALPLCHIYGLSLFVMGLLSLGSTIVVMK 283          
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: 4CLL1_ORYSJ (4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica GN=4CLL1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.647e-12
Identity = 48/151 (31.79%), Postives = 68/151 (45.03%), Query Frame = 2
Query:  248 GDVYTYGEVEQTARKIASGLN-KLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQAKASGAKLIITKACYVDKVKDLEEVKIMCIDS--------PPDG--CLHFSELTQADEKDLPHVEILPDDVVALPYSSGT 667
            G   T+ E+       A  L+ + G+   D ++LL PN   + + F   + LGA+ T  NP +TP E  KQ   + AKL+IT +  V K+  L    I+  D         PPD    L+ + +    E D     I   D  AL YSSGT
Sbjct:   58 GRALTFAELRSAVLSTAVALSSRAGVRPGDAVLLLAPNCVLYPVCFFAVTALGAVGTTVNPDYTPREIAKQVSDARAKLVITISALVPKIAGLRLPVILLDDDANAAAASLPPDATVTLYTNLVAGVKEADYRRPPIKQSDTAALLYSSGT 208          

HSP 2 Score: 25.0238 bits (53), Expect = 1.647e-12
Identity = 10/34 (29.41%), Postives = 17/34 (50.00%), Query Frame = 1
Query:  661 GDTGLPKGVMLTHKGLVTSVAQQVDGENQTCTSP 762
            G TG  KGV+LTH+  + +       +++    P
Sbjct:  207 GTTGDSKGVILTHRNFIAAARMVTSDQDERREGP 240          
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: 4CLL5_ARATH (4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana GN=4CLL5 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 2.910e-11
Identity = 54/184 (29.35%), Postives = 81/184 (44.02%), Query Frame = 2
Query:  134 FRSKLPDIYIPKHLPLHSYCFENISKVASRPCLINGSTGDVYTYGEVEQTARKIASGLNKLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQAKASGAKLIITKACYVDKVK-DLEEVKIMCIDSP-PDGCLHFSELTQADEKD----LPHVEILPDDVVALPYSSGT 667
            F SK   I +P +  L    F +      R   I+ STG   T+ E+ +    +A  L+++GI +  V++LL PN   F +  L    LGAI T  NP  T  E  KQ K S   L  T +  + K+    +++ I+ +D    D       L +  +K+         +  DD   L YSSGT
Sbjct:   17 FYSKRTPIPLPPNPSLDVTTFISSQAHRGRIAFIDASTGQNLTFTELWRAVESVADCLSEIGIRKGHVVLLLSPNSILFPVVCLSVMSLGAIITTTNPLNTSNEIAKQIKDSNPVLAFTTSQLLPKISAAAKKLPIVLMDEERVDSVGDVRRLVEMMKKEPSGNRVKERVDQDDTATLLYSSGT 200          

HSP 2 Score: 28.4906 bits (62), Expect = 2.910e-11
Identity = 21/56 (37.50%), Postives = 28/56 (50.00%), Query Frame = 1
Query:  661 GDTGLPKGVMLTHKGLVTSVAQQV------DGENQ-TCTSPRDAILWGLLCFQYAL 807
            G TG+ KGV+ +H+ L+  V   V      DGE +  CT P   I +GL  F   L
Sbjct:  199 GTTGMSKGVISSHRNLIAMVQTIVNRFGSDDGEQRFICTVPMFHI-YGLAAFATGL 253          
BLAST of EY703053 vs. ExPASy Swiss-Prot
Match: LCFB_BACSU (Long-chain-fatty-acid--CoA ligase OS=Bacillus subtilis GN=lcfB PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 4.912e-11
Identity = 38/152 (25.00%), Postives = 71/152 (46.71%), Query Frame = 2
Query:  260 TYGEVEQTARKIASGLNKLGIGQRDVIMLLLPNVPEFVLSFLGASYLGAIATAANPFFTPAETCKQAKASGAKLIITKA----CYVDKVKDLEEVKIMCI----DSPPDGC--------LHFSELTQADEKDLPHVEILPDDVVALPYSSGT 667
            TY E+ +  ++ A GL + G+ + D + LLL N P+F+++F GA   G +    NP +TP E          K I+  +     Y    + L +V+++ +    ++ P+            F+++ +       + E +PDD   + Y+SGT
Sbjct:   28 TYQELNEYIQRFADGLQEAGMEKGDHLALLLGNSPDFIIAFFGALKAGIVVVPINPLYTPTEIGYMLTNGDVKAIVGVSQLLPLYESMHESLPKVELVILCQTGEAEPEAADPEVRMKMTTFAKILRPTSAAKQNQEPVPDDTAVILYTSGT 179          

HSP 2 Score: 30.4166 bits (67), Expect = 4.912e-11
Identity = 20/63 (31.75%), Postives = 28/63 (44.44%), Query Frame = 1
Query:  661 GDTGLPKGVMLTHKGLVTSVAQQVDG-------ENQTCTSPRDAILWGLLCFQYALNPSCFGG 828
            G TG PKG MLTH+ L ++ A  V G       +N  C  P    ++ + C    +N     G
Sbjct:  178 GTTGKPKGAMLTHQNLYSN-ANDVAGYLGMDERDNVVCALP----MFHVFCLTVCMNAPLMSG 235          
The following BLAST results are available for this feature:
BLAST of EY703053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
4CLL9_ORYSJ3.379e-1831.024-coumarate--CoA ligase-like 9 OS=Oryza sativa sub... [more]
4CL3_DICDI3.229e-1632.37Probable 4-coumarate--CoA ligase 3 OS=Dictyosteliu... [more]
4CL2_DICDI4.217e-1632.06Probable 4-coumarate--CoA ligase 2 OS=Dictyosteliu... [more]
4CL1_DICDI9.395e-1631.88Probable 4-coumarate--CoA ligase 1 OS=Dictyosteliu... [more]
4CLL6_ARATH5.501e-1429.734-coumarate--CoA ligase-like 6 OS=Arabidopsis thal... [more]
4CLL1_ORYSJ1.647e-1231.794-coumarate--CoA ligase-like 1 OS=Oryza sativa sub... [more]
4CLL5_ARATH2.910e-1129.354-coumarate--CoA ligase-like 5 OS=Arabidopsis thal... [more]
LCFB_BACSU4.912e-1125.00Long-chain-fatty-acid--CoA ligase OS=Bacillus subt... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-015-C10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703053 ID=EY703053; Name=EY703053; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGTACATATGTTTATCAAAAAAGCTTCTGTTCGTAATCATT
TTCATCATACCAACTTTTTAGTTTCTTCAATGGAGACTCAAGCTCAAACA
CAAACACAAACCAAGCAACAAGAAGAGATCATTTTCCGATCAAAGCTCCC
CGATATTTACATCCCTAAACACCTCCCTTTACACTCTTACTGCTTTGAAA
ACATCTCAAAGGTAGCTTCACGCCCTTGTTTGATCAATGGCTCCACCGGT
GACGTCTACACTTATGGGGAAGTCGAGCAGACTGCGCGTAAAATCGCTTC
TGGGTTAAACAAGCTAGGCATCGGACAACGCGATGTGATCATGCTCTTGC
TCCCAAACGTGCCCGAGTTTGTGCTCTCCTTCCTCGGAGCATCTTACCTC
GGCGCCATTGCCACTGCGGCCAATCCTTTCTTCACGCCGGCAGAGACATG
CAAACAGGCTAAGGCCTCAGGCGCCAAGCTCATAATCACAAAAGCTTGTT
ACGTCGATAAAGTCAAGGACTTAGAAGAAGTGAAAATCATGTGCATTGAC
TCACCCCCGGATGGCTGCTTGCATTTTTCGGAACTTACACAGGCCGACGA
GAAAGATCTGCCCCACGTCGAAATCTTACCCGACGACGTCGTGGCGCTCC
CGTACTCGTCGGGGACACAGGCTTACCAAAGGGTGTCATGTTAACGCACA
AAGGGCTCGTCACAAGCGTGGCACAACAAGTCGATGGCGAGAATCAAACT
TGTACTTCACCAAGAGACGCGATCCTATGGGGGCTGCTTTGTTTCCAATA
TGCTCTCAATCCATCATGCTTTGGGGGGTAAAGCTGGGGCAGCATCTTGA
TCATGCGAAAGTTG
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