EY703052

Overview
NameEY703052
Unique NameEY703052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 1.127e-77
Identity = 137/155 (88.39%), Postives = 146/155 (94.19%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 476
            EHHFESKADAGASKT+PQQAGT+RKNG+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD PHV RT+YQLIDISEDGFVSLLT  GNTKDDLRLPTDE L++QIK+GF  GKDLVVTV S+MGEEQICALKD+GPK
Sbjct:    6 EHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.280e-77
Identity = 139/155 (89.68%), Postives = 146/155 (94.19%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 476
            EH FESKADAGASKT+PQQAGTIRK G+IVIKNR CKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDL+LPTD+ LL+QIKDGF EGKDLVV+VMS+MGEEQICALKDIGPK
Sbjct:    5 EHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLTU (Eukaryotic translation initiation factor 5A-4 OS=Solanum tuberosum GN=EIF5A4 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.280e-77
Identity = 140/155 (90.32%), Postives = 147/155 (94.84%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 476
            EH FESKADAGASKT+PQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLT+ GNTKDDLRLPTD++LLSQIKDGFAEGKDLVV+VMS+MGEEQI ALKDIGPK
Sbjct:    5 EHQFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDDSLLSQIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A4_SOLLC (Eukaryotic translation initiation factor 5A-4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.307e-77
Identity = 137/155 (88.39%), Postives = 145/155 (93.55%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 476
            EHHFESKADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFN KKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTD+ LL+Q+K GF EGKDLV++VMS+MGEEQICA+KDIG K
Sbjct:    5 EHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNAKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDTLLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTK 159          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.307e-77
Identity = 137/156 (87.82%), Postives = 147/156 (94.23%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPKN 479
            EHHFESKADAGASKT+PQQAGTIRK+GYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDLRLPTD+ LL+Q+K GF EGKDLV++VMS+MGEEQICA+KDIG K+
Sbjct:    5 EHHFESKADAGASKTYPQQAGTIRKSGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDALLNQVKGGFEEGKDLVLSVMSAMGEEQICAVKDIGTKS 160          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.628e-76
Identity = 139/157 (88.54%), Postives = 148/157 (94.27%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDI-VPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPKN 479
            EH FESKADAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLE++ VPSSHNCD PHV RTDYQLIDISEDGFVSLLTE GNTKDDL+LPTD++LL+QIKDGFAEGKDLVV+VMS+MGEEQICALKDIG KN
Sbjct:    5 EHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGKN 161          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 3.177e-72
Identity = 132/155 (85.16%), Postives = 142/155 (91.61%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 476
            EHHFES +DAGASKT+PQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCD PHV RTDYQLIDISEDG+VSLLT+ G+TKDDL+LP D+ LL QIK GF +GKDLVV+VMS+MGEEQI ALKDIGPK
Sbjct:    5 EHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.825e-71
Identity = 127/155 (81.94%), Postives = 142/155 (91.61%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIGPK 476
            EHHFES +DAGASKT+PQQAG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCD PHV R DYQLIDISEDGFVSLLT+ G+TKDDL+LPTDE LL+Q+K+GF EGKD+VV+VMS+MGEEQ+CALK++GPK
Sbjct:    5 EHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.277e-70
Identity = 122/152 (80.26%), Postives = 141/152 (92.76%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDI 467
            +HHFES ADAGASKT+PQQAGTIRK+G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD PHV R DYQL+DI+EDGFVSLLT++G+TKDDL+LP DE L+ Q+K+GF  GKDL+++VM +MGEEQICA+KD+
Sbjct:    5 DHHFESSADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLPADEALVKQMKEGFEAGKDLILSVMCAMGEEQICAVKDV 156          
BLAST of EY703052 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.527e-66
Identity = 119/153 (77.78%), Postives = 138/153 (90.20%), Query Frame = 3
Query:   12 EHHFESKADAGASKTFPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKDIG 470
            EHHFE+ +++GASKT+PQ AG IRK G+IVIKNRPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCD PHV R DYQLIDI+EDGFVSLLT++G TKDDL+LPTD+ L +Q++ GF EGKD+VV+VMSSMGEEQICA+K++G
Sbjct:    5 EHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156          
The following BLAST results are available for this feature:
BLAST of EY703052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
IF5A_MAIZE1.127e-7788.39Eukaryotic translation initiation factor 5A OS=Zea... [more]
IF5A_SENVE3.280e-7789.68Eukaryotic translation initiation factor 5A OS=Sen... [more]
IF5A4_SOLTU3.280e-7790.32Eukaryotic translation initiation factor 5A-4 OS=S... [more]
IF5A4_SOLLC7.307e-7788.39Eukaryotic translation initiation factor 5A-4 OS=S... [more]
IF5A1_SOLTU7.307e-7787.82Eukaryotic translation initiation factor 5A-1/2 OS... [more]
IF5A1_MEDSA1.628e-7688.54Eukaryotic translation initiation factor 5A-1 OS=M... [more]
IF5A1_ARATH3.177e-7285.16Eukaryotic translation initiation factor 5A-1 OS=A... [more]
IF5A3_ARATH7.825e-7181.94Eukaryotic translation initiation factor 5A-3 OS=A... [more]
IF5A_DIACA2.277e-7080.26Eukaryotic translation initiation factor 5A OS=Dia... [more]
IF5A2_ARATH1.527e-6677.78Eukaryotic translation initiation factor 5A-2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-015-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703052 ID=EY703052; Name=EY703052; organism=Citrus sinensis; type=EST; length=863bp
CCACGCGTCCGGAGCACCACTTCGAATCGAAGGCTGATGCCGGTGCATCG
AAGACTTTCCCTCAGCAAGCTGGAACCATCCGCAAGAATGGTTATATTGT
CATCAAAAATCGTCCTTGCAAGGTTGTTGAAGTTTCCACTTCAAAGACTG
GCAAGCATGGACATGCCAAGTGCCACTTTGTGGGAATTGATATATTTAAT
GGAAAGAAGCTTGAAGATATTGTGCCTTCCTCCCACAATTGTGATGCTCC
CCATGTTACTCGCACTGACTATCAGCTGATTGATATATCCGAAGATGGTT
TTGTGAGCCTTTTAACTGAAACCGGAAACACCAAGGATGATCTGAGGCTT
CCTACCGATGAAAATCTGCTTAGCCAGATTAAAGATGGGTTTGCTGAAGG
AAAAGACCTTGTGGTGACCGTTATGTCGTCAATGGGAGAGGAGCAGATCT
GTGCCCTTAAGGACATTGGTCCTAAGAATTAACTATAATCCCATGGCATT
AGCTTTGGCTGATAGCAGGAGAACTCTTTCTTATGTTGCCCACATGGAGA
CTATCTACTATCGGTGTCCACAACAAACTTCCGTTAACATACGATTGTGG
GCTGGGGGACTACACTATCGCCGCGCTTGGGATAAAGGAAGTGGAAATAA
AGCAGGTGTCCATCATCTCCTTGTGAACATACTCTTTGTTCGCTGCATCG
CGCGACTTGACCAAATGTACGTATTTGATTTAAAAATGAATAAACCGGCG
GCGGTTCGGCGCGTTCACGGCTTCCGGCGAGGTGAGGCACATACGGCGGC
CTCCTGAGGCCACCGAAACTCCGGCGGGGAGGGGGTGGGTGCGGGAGCCC
CCCGCGCACGCCG
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