EY703027 | Citrus Genome Database

Overview


Name	EY703027
Unique Name	EY703027
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	891

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.333e-23
Identity = 53/148 (35.81%), Postives = 68/148 (45.95%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AAKDI  FY EHGP IF      N+  SI          P YDG+      +         + L  V I +FD             K N  +    +A++ DIC++    P  FPP
Sbjct:   54 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSILG--------PMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAESPQLDAKMYDICYSTAAAPIYFPP 184

HSP 2 Score: 51.9878 bits (123), Expect = 6.333e-23
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = 1

Query:  115 GNKITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            G  +TVLSIDG GIKGIIP  IL FLE +LQE+D    AR+A  F
Sbjct:   14 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNADARLADYF 58

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PATB2_SOLTU (Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 8.235e-23
Identity = 54/148 (36.49%), Postives = 68/148 (45.95%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AAKDI  FY EHGP IF      N+  SI          P YDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSILG--------PMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPIYFPP 196

HSP 2 Score: 50.0618 bits (118), Expect = 8.235e-23
Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIP  IL FLE +LQE+D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYF 70

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PATJ1_SOLTU (Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.235e-23
Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AA +I  FY EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPIYFPP 197

HSP 2 Score: 53.5286 bits (127), Expect = 8.235e-23
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 70

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PATA2_SOLTU (Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.235e-23
Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AA +I  FY EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSAAAAPTYFPP 197

HSP 2 Score: 53.5286 bits (127), Expect = 8.235e-23
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 70

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PAT02_SOLTU (Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.235e-23
Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AA +I  FY EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPTYFPP 197

HSP 2 Score: 53.5286 bits (127), Expect = 8.235e-23
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 70

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PT1K2_SOLTU (Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.241e-23
Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AA +I  FY EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   54 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPTYFPP 185

HSP 2 Score: 53.5286 bits (127), Expect = 8.241e-23
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   17 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 58

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PATA3_SOLTU (Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.072e-22
Identity = 51/148 (34.46%), Postives = 66/148 (44.59%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AA +I  FY EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPTYFPP 197

HSP 2 Score: 53.1434 bits (126), Expect = 1.072e-22
Identity = 27/42 (64.29%), Postives = 33/42 (78.57%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG G+KGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGVKGIIPGTILEFLEGQLQKMDNNADARLADYF 70

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PAT08_SOLTU (Patatin-08 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.814e-22
Identity = 50/148 (33.78%), Postives = 67/148 (45.27%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T+M+T PN  + PF+AA +I  F+ EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQENLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPTYFPP 197

HSP 2 Score: 53.5286 bits (127), Expect = 1.814e-22
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 70

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.995e-22
Identity = 52/152 (34.21%), Postives = 67/152 (44.08%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPPPLII 670
            L  YFD   GTSTGGL+T M+T PN  + PF+AA +I  FY EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP   I
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFI 201

HSP 2 Score: 50.8322 bits (120), Expect = 3.995e-22
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 1

Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FL  +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLGGQLQKMDNNADARLADYF 70

[Close]

BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PAT17_SOLCD (Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.995e-22
Identity = 50/154 (32.47%), Postives = 68/154 (44.16%), Query Frame = 2

Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPPPLIIGN 676
            L  YFD   GTSTGGL+T M++ PN  + PF+AAK+I  FY EHGP IF    +              +  PKYDG+      +         + L  VVI +FD             K N       +A++ DI ++    P  FPP   + N
Sbjct:   66 LADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQ--------------ILGPKYDGKYLMQVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFT---KSNLANSPELDAKMYDISYSTAAAPTYFPPHYFVTN 202

HSP 2 Score: 53.5286 bits (127), Expect = 3.995e-22
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 1

Query:  115 GNKITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            G  +TVLSIDG GI+GIIP TIL FLE +LQE+D    AR+A  F
Sbjct:   26 GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYF 70

The following BLAST results are available for this feature:

BLAST of EY703027 vs. ExPASy Swiss-Prot

BLAST of EY703027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34


Match Name	E-value	Identity	Description
PT2K4_SOLTU	6.333e-23	35.81	Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ...	[more]
PATB2_SOLTU	8.235e-23	36.49	Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1	[more]
PATJ1_SOLTU	8.235e-23	34.46	Patatin group J-1 OS=Solanum tuberosum PE=2 SV=1	[more]
PATA2_SOLTU	8.235e-23	34.46	Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1	[more]
PAT02_SOLTU	8.235e-23	34.46	Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 P...	[more]
PT1K2_SOLTU	8.241e-23	34.46	Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 ...	[more]
PATA3_SOLTU	1.072e-22	34.46	Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1	[more]
PAT08_SOLTU	1.814e-22	33.78	Patatin-08 OS=Solanum tuberosum PE=2 SV=1	[more]
PAT12_SOLTU	3.995e-22	34.21	Patatin-12 OS=Solanum tuberosum PE=2 SV=1	[more]
PAT17_SOLCD	3.995e-22	32.47	Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-015-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY703027 ID=EY703027; Name=EY703027; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGAGCAATAATTTCGAATTTAAAAGCTGCTCGATCTGATCG
TTCTTTTTAACTTCAAGAAGCTCTTTCAATTTGAAATAAAATGGCCACTG
CCGGTTCTGCAGAAGGAAACAAAATAACAGTTCTGAGCATCGATGGATGT
GGCATTAAAGGCATTATTCCTGGCACTATTTTAGCCTTTCTTGAATCCAA
GCTCCAGGAATTGGATGGACCAAGTGCAAGAATTGCAGNATTATTTTGAT
GAANNAGCAGGAACAAGCACCGGCGGATTGGTAACCACCATGCTTACGGC
ACCCAACAATGAAAGCGGACCTTTCAGCGCTGCAAAGGATATCAATAATT
TTTATCTTGAGCATGGTCCTACAATTTTCCCTCAAATTAGCCGCAGCAAC
TTCTTGGAATCGATTGCAAGCTCTATCGATAAATGTGTGNNNTGACCAAA
GTATGATGGGGAAGTACCTGCGGACACTAGTGAACGATTTACTAGGAGAC
GTTCCTGTAAAAAGACTCTTAACAACGTGGTTATACCAACTTTTGACCTC
AAGCTTCTCAACCAGCATCTTCTCAACCACCATTGGAAAGAAAACTTTTT
AAAAAATGCTCGGCTGGCTGATATATGCTTCACAATTTTGCAAGGCCCAT
TTCCTCCCCCCCTCATAATTGGAAACTAAGGACAGTGCACGGGGGGGAAC
CCCCACTTTTGACCCTTGTAGCGGGGGAAGGCTGGTAAATATCCTACCCC
TTTGGGAAAAACCCCTTTCCAAGGAATGGGGAAAGAAAACCCCCTTTCGG
GGGAAAAACCCAGGGAGGGAAAAAATTGGGGGTTATTCCTAGGGCCGGGT
CGCCCAAAAAAATTTAATTAACTCCCCCACCCCCCCAGGGG