EY703027

Overview
NameEY703027
Unique NameEY703027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PAT16_SOLTU (Patatin-16 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.995e-22
Identity = 50/148 (33.78%), Postives = 65/148 (43.92%), Query Frame = 2
Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AA +I  FY EHGP IF   +   F               KYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF--------------RKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPTYFPP 196          

HSP 2 Score: 53.5286 bits (127), Expect = 3.995e-22
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1
Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 70          
BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.197e-22
Identity = 52/148 (35.14%), Postives = 67/148 (45.27%), Query Frame = 2
Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T M+T PN  + PF+AAKDI  FY +HGP IF   +   F              PKYDG+      +         + L  V I +FD             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPIYFPP 197          

HSP 2 Score: 48.521 bits (114), Expect = 5.197e-22
Identity = 26/45 (57.78%), Postives = 31/45 (68.89%), Query Frame = 1
Query:  115 GNKITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            G  +TVLS DG GIKGIIPG I  FLE +LQ++D    AR+A  F
Sbjct:   26 GEMVTVLSTDGGGIKGIIPGIIPEFLEGQLQKMDNNADARLADYF 70          
BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PATD2_SOLTU (Patatin group D-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 6.762e-22
Identity = 49/148 (33.11%), Postives = 67/148 (45.27%), Query Frame = 2
Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T+M+T PN  + PF+AA +I  F+ EHGP IF   +   F              PKYDG+      +         + L  V I +FD             K +  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQENLGETRVHQALTEVAISSFDIKTNKPVIFT---KSDLAKSPELDAKMYDICYSTAAAPTYFPP 197          

HSP 2 Score: 53.5286 bits (127), Expect = 6.762e-22
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1
Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 70          
BLAST of EY703027 vs. ExPASy Swiss-Prot
Match: PATD3_SOLTU (Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.797e-22
Identity = 49/148 (33.11%), Postives = 66/148 (44.59%), Query Frame = 2
Query:  233 LQXYFDEXAGTSTGGLVTTMLTAPNNESGPFSAAKDINNFYLEHGPTIFPQISRSNFLESIASSIDKCVX*PKYDGEVPADTSERFTRRRSCKKTLNNVVIPTFDXXXXXXXXXXXXWKENFLK----NARLADICFTILQGP--FPP 658
            L  YFD   GTSTGGL+T+M+T PN  + PF+AA +I  F+ EHGP IF   +   F              PKYDG+      +         + L  V I + D             K N  K    +A++ DIC++    P  FPP
Sbjct:   66 LADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQENLGETRVHQALTEVAISSLDIKTNKPVIFT---KSNLAKSPELDAKMYDICYSTAAAPTYFPP 197          

HSP 2 Score: 53.5286 bits (127), Expect = 8.797e-22
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 1
Query:  124 ITVLSIDGCGIKGIIPGTILAFLESKLQELD-GPSARIAXLF 246
            +TVLSIDG GIKGIIPGTIL FLE +LQ++D    AR+A  F
Sbjct:   29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYF 70          
The following BLAST results are available for this feature:
BLAST of EY703027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PAT16_SOLTU3.995e-2233.78Patatin-16 OS=Solanum tuberosum PE=2 SV=1[more]
PAT11_SOLTU5.197e-2235.14Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PATD2_SOLTU6.762e-2233.11Patatin group D-2 OS=Solanum tuberosum PE=2 SV=1[more]
PATD3_SOLTU8.797e-2233.11Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-015-A07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY703027 ID=EY703027; Name=EY703027; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGAGCAATAATTTCGAATTTAAAAGCTGCTCGATCTGATCG
TTCTTTTTAACTTCAAGAAGCTCTTTCAATTTGAAATAAAATGGCCACTG
CCGGTTCTGCAGAAGGAAACAAAATAACAGTTCTGAGCATCGATGGATGT
GGCATTAAAGGCATTATTCCTGGCACTATTTTAGCCTTTCTTGAATCCAA
GCTCCAGGAATTGGATGGACCAAGTGCAAGAATTGCAGNATTATTTTGAT
GAANNAGCAGGAACAAGCACCGGCGGATTGGTAACCACCATGCTTACGGC
ACCCAACAATGAAAGCGGACCTTTCAGCGCTGCAAAGGATATCAATAATT
TTTATCTTGAGCATGGTCCTACAATTTTCCCTCAAATTAGCCGCAGCAAC
TTCTTGGAATCGATTGCAAGCTCTATCGATAAATGTGTGNNNTGACCAAA
GTATGATGGGGAAGTACCTGCGGACACTAGTGAACGATTTACTAGGAGAC
GTTCCTGTAAAAAGACTCTTAACAACGTGGTTATACCAACTTTTGACCTC
AAGCTTCTCAACCAGCATCTTCTCAACCACCATTGGAAAGAAAACTTTTT
AAAAAATGCTCGGCTGGCTGATATATGCTTCACAATTTTGCAAGGCCCAT
TTCCTCCCCCCCTCATAATTGGAAACTAAGGACAGTGCACGGGGGGGAAC
CCCCACTTTTGACCCTTGTAGCGGGGGAAGGCTGGTAAATATCCTACCCC
TTTGGGAAAAACCCCTTTCCAAGGAATGGGGAAAGAAAACCCCCTTTCGG
GGGAAAAACCCAGGGAGGGAAAAAATTGGGGGTTATTCCTAGGGCCGGGT
CGCCCAAAAAAATTTAATTAACTCCCCCACCCCCCCAGGGG
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