EY650410

Overview
NameEY650410
Unique NameEY650410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650410 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14
Identity = 55/157 (35.03%), Postives = 80/157 (50.96%), Query Frame = 1
Query:  250 LKEALSKVLVPFYPLAGRLGKDENGRIEIKCNGE-----GVLFIEAETSCVA-DDFGDFESSFKLVQLVPQVDRTK-DAYFHPLIMAQVTHFKCGGVSLGLMMHHMPMDGTTAYHFINSWAEMARGI-PIXVPPIFDRT-------ILDVGVPTSPS 675
            LK+ L  VL  FY LAG+L KD+ G   ++ + E     GV F  A  + V  DD    + + K  +LVP       +    PL+  QVT  K  G+++GL  +H  +DGT+ +HF++SWAE+ RG   I   P  DR+        LD+  P  P+
Sbjct:   65 LKDGLGLVLEDFYQLAGKLAKDDEGVFRVEYDAEDSEINGVEFSVAHAADVTVDDLTAEDGTAKFKELVPYNGILNLEGLSRPLLAVQVTKLK-DGLAMGLAFNHAVLDGTSTWHFMSSWAEICRGAQSISTQPFLDRSKARDTRVKLDLTAPKDPN 220          
BLAST of EY650410 vs. ExPASy Swiss-Prot
Match: DAT_CATRO (Deacetylvindoline O-acetyltransferase OS=Catharanthus roseus GN=DAT PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12
Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   58 MHAGGDTMETIHVKESTIIRPAQETPRHCLR--LSDLDLLIPEIHIPCVYFYRRPNYPCNFLEGGLLKEALSKVLVPFYPLAGRLGKDENGRIEIKCNGEGVLFIEAETSCVADDFGDFE-SSFKLVQLVPQVDRTKDAYFHPLIMAQVTHFKCGGVSLGLMMHHMPMDGTTAYHFINSWAEMA 600
            M +G  ++ET      T+I+P+  TP+   R  LS  D  I +  +   +FY  P+          L+ +LSK LV +YP AG++ K++     I CN +G+ F+E    C  +D   +E  S+    ++P+  R          + Q++HF CGG+++   + H   DG T   F+  WA  A
Sbjct:    1 MESGKISVET-ETLSKTLIKPSSPTPQSLSRYNLSYNDQNIYQTCVSVGFFYENPDGIEISTIREQLQNSLSKTLVSYYPFAGKVVKNDY----IHCNDDGIEFVEVRIRCRMNDILKYELRSYARDLVLPK--RVTVGSEDTTAIVQLSHFDCGGLAVAFGISHKVADGGTIASFMKDWAASA 177          
The following BLAST results are available for this feature:
BLAST of EY650410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DCR_ARATH9.514e-1435.03BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
DAT_CATRO3.060e-1229.35Deacetylvindoline O-acetyltransferase OS=Catharant... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-F11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650410 ID=EY650410; Name=EY650410; organism=Citrus sinensis; type=EST; length=904bp
CTATCATAGCTAACCATATCTATTATCCTGTATATTCTTATTTTTCGTGG
CCACCGGATGCACGCAGGTGGTGACACAATGGAAACAATTCACGTAAAAG
AGTCAACAATAATACGGCCTGCTCAAGAAACCCCCAGACATTGCCTACGG
TTGAGTGATTTAGACCTGCTGATTCCGGAAATTCACATCCCCTGTGTGTA
TTTCTACCGGCGGCCAAATTATCCTTGCAATTTCTTAGAAGGTGGTTTAC
TGAAGGAGGCTTTGAGTAAAGTTCTTGTCCCGTTTTACCCCTTGGCCGGA
AGATTGGGTAAAGATGAAAATGGCAGAATTGAAATAAAATGTAACGGAGA
GGGAGTTTTATTTATTGAAGCTGAAACGAGTTGTGTCGCTGATGATTTTG
GTGACTTTGAATCAAGCTTCAAGCTCGTGCAACTTGTTCCACAGGTTGAT
CGCACGAAAGATGCATATTTTCATCCACTTATTATGGCACAGGTAACTCA
TTTTAAGTGTGGAGGAGTTTCTCTTGGACTTATGATGCATCATATGCCAA
TGGACGGAACTACGGCATATCACTTCATCAACTCATGGGCTGAGATGGCG
CGTGGCATTCCTATTANCGTTCCACCAATCTTTGATCGAACTATACTAGA
TGTTGGAGTCCCAACTTCTCCATCATTTCACCACATCGAATACGATCCGC
CTCCTTCCATGAATACTCCTACTCAAAATCCTCAAGCATTTCCAATGCGA
TCCTGAAGTATCACCTGATCAAATGACATCCTTAAAGAAAAACTAAGGAG
ATCACCGATCCACGTCAAGATACTAAATTTGAGATGGAGCACCACAATNT
GGCGCTGGCATGTAAACACGAAGGTTGTCTGTCCATCACCTACCAATTAA
AATT
back to top