EY650407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.371e-49 Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 1 Query: 466 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 771 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+D AFAELKVKEIKNG +AMFSMFGFFVQAIVTGKGPLENLADHLADPVN Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 102
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.371e-49 Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 1 Query: 466 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 771 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+D AFAELKVKEIKNG +AMFSMFGFFVQAIVTGKGPLENLADHLADPVN Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.371e-49 Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 1 Query: 466 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 771 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+D AFAELKVKEIKNG +AMFSMFGFFVQAIVTGKGPLENLADHLADPVN Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 251
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.044e-49 Identity = 94/102 (92.16%), Postives = 98/102 (96.08%), Query Frame = 1 Query: 466 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 771 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+D AFAELKVKEIKNG +AMFSMFGFFVQAIVTGKGPLENLADH+ADPVN Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 4.044e-49 Identity = 94/102 (92.16%), Postives = 98/102 (96.08%), Query Frame = 1 Query: 466 SLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 771 SL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV DPLYPGGSFDPLGLA+D AFAELKVKEIKNG +AMFSMFGFFVQAIVTGKGPLENLADH+ADPVN Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVN 253
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.785e-47 Identity = 94/110 (85.45%), Postives = 98/110 (89.09%), Query Frame = 1 Query: 445 LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG-GPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 771 LDYLGNPSL+HAQSILAIWA QV+LMGAVEGYR+AG GPLGE D LYPGGSFDPL D AFAELKVKEIKNG +AMFSMFGFFVQAIVTGKGPLENLADHLADPVN Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 110
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.230e-31 Identity = 93/239 (38.91%), Postives = 120/239 (50.21%), Query Frame = 1 Query: 58 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGA-HIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFV-QAIVTGKGPLENLADHLADP 765 VG LAPS +G T S V+ + W F G+P P++L G PGD+G+D GL+ PE F + +E E+ HCRWAML G + PE L G W KA +G YLGNP + ++ I A + + + E R + YPGG+FDPLG + D F ELK+KEIKNG +AM + GF V Q+ G GPLENLA HLADP Sbjct: 13 VGVPSLLAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEAL-------GLGNWVKAQEWAALPDGQATYLGNP--VPWGNLPTILAIEFLAIAFAEQQRTME---KDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADP 228
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.219e-30 Identity = 83/190 (43.68%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 205 GEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGG-LDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFV-QAIVTGKGPLENLADHLADP 765 G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L G W KA GG YLG P + ++ I A + + + VE R + YPGG+FDPLG + D F ELKVKEIKNG +A+ ++ GF V Q+ G GPLENLA HLADP Sbjct: 52 GQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL-------GLGNWVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR---SMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADP 229
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.492e-30 Identity = 82/206 (39.81%), Postives = 110/206 (53.40%), Query Frame = 1 Query: 172 PDRVKYLGPFSGE-PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAHIFSEGGLDYLGNPSLIHAQSILAIWA-----CQVVLMGAVEGYRIAGGPLGEVTDPLYPGGS-FDPLGLADDXRA-FAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADP 765 PDR + F G PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PELL + G+ W+ AG + + +L + +L WA ++ G V I TD YPGG FDPLG A EL+ KEIKNG +AM ++ G + Q I TG GP++NL HLADP Sbjct: 63 PDRPLW---FPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 258
BLAST of EY650407 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.367e-30 Identity = 69/103 (66.99%), Postives = 77/103 (74.76%), Query Frame = 1 Query: 466 SLIHAQSILAIWACQVVLMGAVEGYRI---AGGPLGEVTDPLYPGGSFDPLGLADDXRAFAELKVKEIKNGXVAMFSMFGFFVQAIVTGKGPLENLADHLADP 765 +LIHA+S+LAI A QV+LMGAVEGYR A G GE D LYPGG FDPLGLADD F ELKVKEIKNG +AM M GF+ QAIVTG+GP+EN HL DP Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDP 106 The following BLAST results are available for this feature:
BLAST of EY650407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650407 ID=EY650407; Name=EY650407; organism=Citrus sinensis; type=EST; length=897bpback to top |