EY702997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 6.204e-31 Identity = 62/77 (80.52%), Postives = 73/77 (94.81%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 DDIGDV ITNDGATILK+LE+EHPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++LV+ KIHPTS+ISGYR+ Sbjct: 47 DDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRL 123 HSP 2 Score: 25.7942 bits (55), Expect = 6.204e-31 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 360 DSLVNCAKTSMSSKLV 407 D L N AKTSMSSK++ Sbjct: 146 DCLTNTAKTSMSSKII 161
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.052e-30 Identity = 59/77 (76.62%), Postives = 73/77 (94.81%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 DDIGDV +TNDGATIL +L++EHPA KVLVELA+ QD+EVGDGTTSVVI+AAE+L+RAN+LV+NKIHPT+II+GYR+ Sbjct: 52 DDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRL 128 HSP 2 Score: 27.335 bits (59), Expect = 1.052e-30 Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 360 DSLVNCAKTSMSSKLV 407 +SL+N AKTSMSSK++ Sbjct: 151 ESLINVAKTSMSSKII 166
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.370e-30 Identity = 61/77 (79.22%), Postives = 72/77 (93.51%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 DDIGDV ITNDGATILK+LE+EHPAAKVL ELA+LQD+EVGDGTTSVVI+AAE+LK A++L + KIHPTS+ISGYR+ Sbjct: 47 DDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRL 123 HSP 2 Score: 27.335 bits (59), Expect = 1.370e-30 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3 Query: 360 DSLVNCAKTSMSSKLV 407 D L+N AKTSMSSK++ Sbjct: 146 DCLINAAKTSMSSKII 161
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 3.024e-30 Identity = 60/77 (77.92%), Postives = 72/77 (93.51%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 DD+GDV +TNDGATILK LE+EHPA KVLVELA+LQD EVGDGTTSVVIVAAE+LKRA++LV+ K+HPT+II+GYR+ Sbjct: 51 DDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL 127 HSP 2 Score: 26.1794 bits (56), Expect = 3.024e-30 Identity = 11/15 (73.33%), Postives = 14/15 (93.33%), Query Frame = 3 Query: 363 SLVNCAKTSMSSKLV 407 S+VN AKTSMSSK++ Sbjct: 151 SVVNAAKTSMSSKII 165
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 3.412e-28 Identity = 69/142 (48.59%), Postives = 95/142 (66.90%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRVGNSCFTHPFSSIFPHFFNYMDSMQIC*RNIGCEGREAWKRFFSKLCQDKHVLEVGGDNDFFANLV 436 DDIGD +TNDGATIL +L+++HPA K+LVELA+ QDRE+GDGTTSVVI+A+E+LKRAN+LV+NKIHPT+II+G+RV +I F N ++ ++ G+E K +G D+DFF+N+V Sbjct: 55 DDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALR------EAI--RFIN-----EVLSTSVDTLGKETLINIAKTSMSSK---IIGADSDFFSNMV 180
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.357e-27 Identity = 54/77 (70.13%), Postives = 71/77 (92.21%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 D+IG + +TNDGATIL+ ++IEHPAAK+LV+L+ELQD+EVGDGTT+VVI+AAE+LKRAN+LV K+HPT IISG+R+ Sbjct: 48 DNIGSIVVTNDGATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRL 124 HSP 2 Score: 25.0238 bits (53), Expect = 6.357e-27 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 360 DSLVNCAKTSMSSKLV 407 D +VN AKTSMSSK + Sbjct: 147 DFIVNIAKTSMSSKTI 162
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.115e-26 Identity = 53/77 (68.83%), Postives = 70/77 (90.91%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 DD+GDV ITNDGATILK+L++EHPAAK+LV+LA+LQD EVGDGTTSVVI+AA +LK A++L+ +HPT++I+GYR+ Sbjct: 44 DDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRL 120
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21 Identity = 41/77 (53.25%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 DD+GD+ +TNDG TILK + +EHPAAK+L+E+A+ Q++EVGDGTT+ V++A E+L++A +L+ +HPT +I GY++ Sbjct: 52 DDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQL 128
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.277e-21 Identity = 45/76 (59.21%), Postives = 62/76 (81.58%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYR 238 D +GDV ITNDG TILK +++EHPAAK+++E+A+ QD EVGDGTT+ V++A E+LKRA +L+ +IHP I +GYR Sbjct: 54 DSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYR 129
BLAST of EY702997 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.891e-21 Identity = 45/77 (58.44%), Postives = 62/77 (80.52%), Query Frame = 2 Query: 11 DDIGDVKITNDGATILKMLEIEHPAAKVLVELAELQDREVGDGTTSVVIVAAEMLKRANDLVRNKIHPTSIISGYRV 241 D +GDV ITNDG TILK +++EHPAAK+++E+A+ QD EVGDGTT+ V++A E+LK+A +L+ IHPT I GYR+ Sbjct: 54 DSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRM 130 The following BLAST results are available for this feature:
BLAST of EY702997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 133
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702997 ID=EY702997; Name=EY702997; organism=Citrus sinensis; type=EST; length=822bpback to top |