EY650398

Overview
NameEY650398
Unique NameEY650398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12
Identity = 43/140 (30.71%), Postives = 68/140 (48.57%), Query Frame = 2
Query:  449 GGEVRVTQQSSPVVKKXXXXXXXXXXHYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTLHNAAG 838
            GG + V + ++P  ++           YRGVT +R TGR+E+H+WD  C        G+QVYLGG+D             + + G     NF + +YE ++++MK++T+    A        F +G   Y GVT H+  G
Sbjct:  157 GGALAVVETATP--RRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHG 294          
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: BBM_ARATH (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana GN=BBM PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 2
Query:  530 YRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTLHNAAG 838
            YRGVT +R TGR+E+H+WD  C        G+QVYLGG+D             + + G     NF L++YE ++++MK++T+    A        F +G   Y GVT H+  G
Sbjct:  211 YRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHG 323          
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: BBM2_BRANA (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus GN=BBM2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 2
Query:  530 YRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTLHNAAG 838
            YRGVT +R TGR+E+H+WD  C        G+QVYLGG+D             + + G     NF +++YE ++++MK++T+    A        F +G   Y GVT H+  G
Sbjct:  211 YRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHG 323          
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus GN=BBM1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 2
Query:  530 YRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTLHNAAG 838
            YRGVT +R TGR+E+H+WD  C        G+QVYLGG+D             + + G     NF +++YE ++++MK++T+    A        F +G   Y GVT H+  G
Sbjct:  211 YRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHG 323          
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: WRI1_ARATH (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana GN=WRI1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.019e-12
Identity = 43/130 (33.08%), Postives = 61/130 (46.92%), Query Frame = 2
Query:  530 YRGVTFYRRTGRWESHIWDC----------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTL--HNAAGGNTLGAILGKSYLCL 883
            YRGVT +R TGR+E+H+WD           GKQVYLG +D+            + + G D  +NF    Y  ++++M+ +TK    A        F +G  KY GV    HN      +G + G  YL L
Sbjct:   66 YRGVTRHRWTGRFEAHLWDKSSWNSIQNKKGKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYL 195          
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana GN=AIL7 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.169e-11
Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 2
Query:  530 YRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTLHNAAG 838
            YRGVT +R TGR+E+H+WD  C        G+QVYLGG+D             + + G  A  NF ++ Y  ++++M ++TK    A        F +G   Y GVT H+  G
Sbjct:  174 YRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQG 286          
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana GN=AIL1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.169e-11
Identity = 41/133 (30.83%), Postives = 62/133 (46.62%), Query Frame = 2
Query:  470 QQSSPVVKKXXXXXXXXXXHYRGVTFYRRTGRWESHIWD--C--------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTLHNAAG 838
            Q    V +K           YRGVT +R TGR+E+H+WD  C        G+QVYLGG+D             + + G    +NF L++YE +++++ N+ +    A        F +G   Y GVT H+  G
Sbjct:  204 QVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHG 336          
BLAST of EY650398 vs. ExPASy Swiss-Prot
Match: AP2L3_ARATH (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.443e-11
Identity = 38/113 (33.63%), Postives = 55/113 (48.67%), Query Frame = 2
Query:  530 YRGVTFYRRTGRWESHIWDC----------GKQVYLGGFDTXXXXXXXXXXXXINFRGVDADINFNLADYEDDMKQMKNLTKGRICAHTPSPEHWFLKGKLKYXGVTLHNAAG 838
            YRGVT +R TGR+E+H+WD           G+QVYLG +D             + + G D  +NF L  Y++D+K+M+  +K             F +G  KY GV  H+  G
Sbjct:   53 YRGVTRHRWTGRYEAHLWDKNSWNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNG 165          
The following BLAST results are available for this feature:
BLAST of EY650398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
PLET1_ARATH1.804e-1230.71AP2-like ethylene-responsive transcription factor ... [more]
BBM_ARATH1.804e-1235.40AP2-like ethylene-responsive transcription factor ... [more]
BBM2_BRANA3.077e-1234.51AP2-like ethylene-responsive transcription factor ... [more]
BBM1_BRANA3.077e-1234.51AP2-like ethylene-responsive transcription factor ... [more]
WRI1_ARATH4.019e-1233.08Ethylene-responsive transcription factor WRI1 OS=A... [more]
AIL7_ARATH1.169e-1134.51AP2-like ethylene-responsive transcription factor ... [more]
AIL1_ARATH1.169e-1130.83AP2-like ethylene-responsive transcription factor ... [more]
AP2L3_ARATH4.443e-1133.63AP2-like ethylene-responsive transcription factor ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-E11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650398 ID=EY650398; Name=EY650398; organism=Citrus sinensis; type=EST; length=907bp
CTAAATAAAAGCTATGTTGGATCTCAATCTAAATGTGATGTCGATCGAGT
CGACTCATCAGAACTCGGATGAGGAGCGAGTCGGCTCGGTCGTATTGGTG
GAGAAATCCCCGGAAGGTTCGTCGGGGACGTCGAATTCGTCAGTGGTCAA
TGCAGACGCCAGCAGCAATGTTGGCGACGACGAGTCGTGCTCCACACGCG
CCGTAGCCGGGGACAACAGTGTGTTCACTTTTAATTTCGACATACTGAAG
GTCGGTGGTGACAGCGGCAACGTTAGGAACGAGAACGTGGAACAAAACAA
CGCCGCTTCGAGGAAGGAGTTTGCGTTTTTTCCTGCGAGTGGTGGAGGAG
AGAATGGAGGAGGCCAGTCTTCTGGAAGCTGGATCGATCTTTCATTTGAT
AAACAGCAGCAACAGTATCAGAACCAACAGCCCCAGCAACAAGAATGCGG
GGGAGAGGTGCGGGTGACGCAACAATCGTCACCGGTGGTGAAGAAGAGCA
GGAGAGGGCCCAGGTCAAGGAGCTCTCATTATAGAGGGGTCACGTTCTAT
AGGAGGACTGGCCGATGGGAATCGCATATCTGGGATTGTGGGAAACAAGT
CTATCTTGGTGGATTTGACACTGCTCATGCTGCGGCTAGGGCCTATGATC
GTGCAGCTATTAACTTCAGGGGTGTTGATGCCGACATCAATTTCAATTTG
GCTGATTACGAGGACGATATGAAACAGATGAAGAATTTGACCAAGGGAAG
AATTTGTGCACATACTCCGTCGCCAGAGCACTGGTTTCTCAAGGGGAAGC
TCAAATATANAGGGGTGACACTACACAATGCGGCCGGTGGGAACACGTTA
GGGGCAATTCTCGGCAAAAGTTATTTATGCTTGGCTATTCGACACCGACT
ATATCTG
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