EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702992_ssr848 microsatellite EY702992_ssr848:848..859. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.049e-20
Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            VK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  ++  CW+  P+ RPSF++++        D L   Q  YF++
Sbjct:  283 VKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKILLRQCWNRKPRNRPSFRQILLHLDIASADVLSTPQETYFKS 415          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: YR831_MIMIV (Putative serine/threonine-protein kinase/receptor R831 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R831 PE=4 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.790e-20
Identity = 51/127 (40.16%), Postives = 76/127 (59.84%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 413
            +H+ VK+ DFG +R+K +   TT T  GTP W APEV+R E   EK+DV+SFGV++WE+ T K P+   N M+V   +     R  IP D    +A +++ CWH+    RP+  E+V +L  +  Q+
Sbjct: 1497 EHFNVKIADFGFARIKEDN--TTMTRCGTPCWTAPEVIRGEKYCEKADVFSFGVVMWEVLTGKEPFAECNFMKVSLDI-LEGGRPIIPSDCPHEFAKLIKKCWHAKAHKRPTMTEVVQQLMLITEQF 1620          

HSP 2 Score: 78.5666 bits (192), Expect = 5.577e-14
Identity = 44/129 (34.11%), Postives = 69/129 (53.49%), Query Frame = 3
Query:   39 WTVKVGDFGLSRLKHETSL--TTKTGKGTPQWMAPEVLRNEPSDEK--SDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDV----DPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            W VKV DFGL+++K E     T     GT  W+APE+L +    +   +DVYSFG+ILWEL T + P+  +    +  +V     R  I  +        +  +++ CWHSD   RP+F E++ +L ++
Sbjct:  920 WNVKVSDFGLTKVKSELDKKKTNDNIIGTIHWIAPEILNDSTEVDYILADVYSFGIILWELLTREQPYKGMTPAAIAVSVIRDGMRPPISDEAVTAHSIEYIDLIKQCWHSDTIIRPTFLEIMTRLSNI 1048          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: YR826_MIMIV (Putative serine/threonine-protein kinase/receptor R826 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R826 PE=4 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20
Identity = 44/117 (37.61%), Postives = 75/117 (64.10%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 383
            ++W VK+ DFG +R+K E ++ T+ G  TP W APE++RN+  DEK DV+SFG+++WE+ T K P+   N M++   +   + R +IP+D    +A ++  CWH+    RP+  +++
Sbjct: 1532 ENWNVKIADFGFARIKEENAIMTRCG--TPCWTAPEIIRNDIYDEKVDVFSFGIVMWEVLTCKEPFIGANFMKITMDI-LEDVRPKIPQDCPEEFAKLMRKCWHAKSTKRPTMDDVI 1645          

HSP 2 Score: 90.5077 bits (223), Expect = 1.418e-17
Identity = 50/146 (34.25%), Postives = 79/146 (54.11%), Query Frame = 3
Query:   39 WTVKVGDFGLSRLKHET-SLTTKTGKGTPQWMAPEVLRNEPSDEK--SDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRL----EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQK 455
            W VKV DFGL++ K +  S+  +   GT QW APE+L  +   +   SDVYSFG+I+WEL T   P+  ++   +  +V   N R     ++  +V P +  ++ SCWH DP  RP+F E++ +L +L         S+   ++ K
Sbjct:  921 WNVKVSDFGLTKFKSDVKSINPEKFAGTIQWTAPEILSEDREVDYILSDVYSFGIIMWELITRDQPYFGMSPAAIAVSVIRDNYRPVISDQLRSEVAPEYIELLTSCWHFDPTIRPTFLEIMTRLSNLMGDSGMTGMSSSSSNSSK 1066          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.338e-20
Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            TVK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  +++  W S P+ RPSF++++        D L   Q  YF++
Sbjct:  295 TVKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQILMHLDIAAADVLGTPQETYFKS 428          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.988e-20
Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHETSLT-TKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +H+ +K+ D G++R   ETS T T T  GT  W APE+LR+E  ++K+DVYS+ ++L+EL T + P+  +  M     V     R E+P + DP W  +V  CW  DP  RPSF+E+ + L
Sbjct: 1210 KHFNIKIADLGIAR---ETSFTQTMTTIGTVAWTAPEILRHESYNQKADVYSYAIVLYELLTGEEPYQGIPPMNAGILVASKGLRPELPDNCDPNWKKLVVWCWSEDPNKRPSFEEITNYL 1327          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 3.988e-20
Identity = 47/129 (36.43%), Postives = 75/129 (58.14%), Query Frame = 3
Query:   24 SSSQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 410
            SS Q    K+ DFGLSRLK E +       G   +MAPEV + + + EKSDVYS+G++L+EL T   P  ++  M++     + + R  IP     +W  I+  CW S+P  RP+F++++  L++++ Q
Sbjct: 2263 SSRQDIKCKISDFGLSRLKMEQASQMTQSVGCIPYMAPEVFKGDSNSEKSDVYSYGMVLFELLTSDEPQQDMKPMKMAHLAAYESYRPPIPLTTSSKWKEILTQCWDSNPDSRPTFKQIIVHLKEMEDQ 2391          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.208e-20
Identity = 47/119 (39.50%), Postives = 73/119 (61.34%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            VK+ DFG +R+K E S+ T+ G  TP W APE++R E   EK DV+SFG+++WE+ T K P+   N M+V   +     R +IP D    +  +++ CWH+ P  RPS ++++  L D+
Sbjct: 1529 VKIADFGFARIKEENSVMTRCG--TPCWTAPEIIRGEKYTEKVDVFSFGIVMWEVLTCKEPFSGCNFMKVSMDI-LEGARPQIPSDCPIDFTKLMKQCWHAKPDKRPSMEDVIMGLNDM 1644          

HSP 2 Score: 83.9593 bits (206), Expect = 1.328e-15
Identity = 55/146 (37.67%), Postives = 75/146 (51.37%), Query Frame = 3
Query:   39 WTVKVGDFGLSRLKHET---SLTTKTGKGTPQWMAPEVLRNEPSDEK--SDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKD----VDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDST 449
            W VKV DFGL+++K      S T +    + QW APEVL  +   +   +DVYSFG+I+WEL T   P+  L+   +  AV   N R EI ++    +   +  +V  CWH D   RPSF E++ KL  L       S  T G ST
Sbjct:  927 WNVKVSDFGLTKIKDNNKGKSSTKEDSVCSIQWTAPEVLSEKQDIDYILADVYSFGIIMWELMTRLRPYIGLSPAAIAVAVIRDNLRPEIQEEDINLMSSDYVELVNICWHKDTMIRPSFLEIMTKLSTL----IGGSGITTGTST 1068          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K9_HUMAN (Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens GN=MAP3K9 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20
Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 3
Query:   12 RVRSSSSQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 416
            +V +    +  +K+ DFGL+R  H T  T  +  GT  WMAPEV+R     + SDV+S+GV+LWEL T ++P+  ++ + V   V      L IP      +A ++E CW+ DP  RPSF  ++D+L  ++   F
Sbjct:  279 KVENGDLSNKILKITDFGLAREWHRT--TKMSAAGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTIEESGF 411          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K11_HUMAN (Mitogen-activated protein kinase kinase kinase 11 OS=Homo sapiens GN=MAP3K11 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20
Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 3
Query:   15 VRSSSSQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 410
            + S   +H T+K+ DFGL+R  H+T  T  +  GT  WMAPEV++     + SDV+SFGV+LWEL T ++P+  ++ + V   V      L IP      +A ++  CW  DP  RP F  ++ +L  L+ Q
Sbjct:  253 IESDDMEHKTLKITDFGLAREWHKT--TQMSAAGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFAQLMADCWAQDPHRRPDFASILQQLEALEAQ 382          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K13_MOUSE (Mitogen-activated protein kinase kinase kinase 13 OS=Mus musculus GN=Map3k13 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            VK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  +++  W S P+ RPSF++ +        D L   Q  YF++
Sbjct:  292 VKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASADVLATPQETYFKS 424          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
M3K12_RAT1.049e-2038.81Mitogen-activated protein kinase kinase kinase 12 ... [more]
YR831_MIMIV1.790e-2040.16Putative serine/threonine-protein kinase/receptor ... [more]
YR826_MIMIV2.338e-2037.61Putative serine/threonine-protein kinase/receptor ... [more]
M313B_XENLA2.338e-2039.26Mitogen-activated protein kinase kinase kinase 13-... [more]
Y9963_DICDI3.988e-2040.50Probable serine/threonine-protein kinase DDB_G0272... [more]
PYK1_DICDI3.988e-2036.43Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
YR818_MIMIV5.208e-2039.50Putative serine/threonine-protein kinase/receptor ... [more]
M3K9_HUMAN6.802e-2036.30Mitogen-activated protein kinase kinase kinase 9 O... [more]
M3K11_HUMAN6.802e-2037.12Mitogen-activated protein kinase kinase kinase 11 ... [more]
M3K13_MOUSE1.160e-1938.81Mitogen-activated protein kinase kinase kinase 13 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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