EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_RHIFE (Hepatocyte growth factor receptor OS=Rhinolophus ferrumequinum GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +++TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1214 ENFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDHLYEVMLKCWHPKAEQRPSFAELVSRI 1337
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_PONAB (Hepatocyte growth factor receptor OS=Pongo abelii GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1214 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_PAPAN (Hepatocyte growth factor receptor OS=Papio anubis GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1214 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_PANTR (Hepatocyte growth factor receptor OS=Pan troglodytes GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1214 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_NEONE (Hepatocyte growth factor receptor OS=Neofelis nebulosa GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAELRPSFSELVSRI 1338
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_MUSPF (Hepatocyte growth factor receptor OS=Mustela putorius furo GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAELRPSFSELVSRI 1338
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_MUNMU (Hepatocyte growth factor receptor OS=Muntiacus muntjak GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDALYEVMLKCWHPKAELRPSFSELVSRI 1338
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_MICMU (Hepatocyte growth factor receptor OS=Microcebus murinus GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1338
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_HYLLE (Hepatocyte growth factor receptor OS=Hylobates leucogenys GN=MET PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1214 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
[Close]
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_HUMAN (Hepatocyte growth factor receptor OS=Homo sapiens GN=MET PE=1 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3 
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1214 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1337
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
MET_RHIFE1.243e-1337.60Hepatocyte growth factor receptor OS=Rhinolophus f... [more]
MET_PONAB1.243e-1337.60Hepatocyte growth factor receptor OS=Pongo abelii ... [more]
MET_PAPAN1.243e-1337.60Hepatocyte growth factor receptor OS=Papio anubis ... [more]
MET_PANTR1.243e-1337.60Hepatocyte growth factor receptor OS=Pan troglodyt... [more]
MET_NEONE1.243e-1337.60Hepatocyte growth factor receptor OS=Neofelis nebu... [more]
MET_MUSPF1.243e-1337.60Hepatocyte growth factor receptor OS=Mustela putor... [more]
MET_MUNMU1.243e-1337.60Hepatocyte growth factor receptor OS=Muntiacus mun... [more]
MET_MICMU1.243e-1337.60Hepatocyte growth factor receptor OS=Microcebus mu... [more]
MET_HYLLE1.243e-1337.60Hepatocyte growth factor receptor OS=Hylobates leu... [more]
MET_HUMAN1.243e-1337.60Hepatocyte growth factor receptor OS=Homo sapiens ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
back to top