EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ROCO8_DICDI (Probable serine/threonine-protein kinase roco8 OS=Dictyostelium discoideum GN=roco8 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWD--NLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            + KV DFGLSR   + + ++K     P W +PEVL+    +EKSD+YSFG+ILWE    ++P+D  +   M  +        R  I ++ +  +++++  CW++DP  RPSF  ++  L +++
Sbjct: 1740 SAKVSDFGLSRSIVQ-NFSSKV-VDNPTWQSPEVLKGMEYNEKSDIYSFGMILWECYHLELPFDEFDFKFMSTLEDNILSGLRPSINQNCNRMYSSLITKCWNADPNLRPSFNSILKTLNEIK 1860          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_SHEEP (Hepatocyte growth factor receptor OS=Ovis aries GN=MET PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAELRPSFSELVSRI 1338          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_LOXAF (Hepatocyte growth factor receptor OS=Loxodonta africana GN=MET PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRI 1338          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_CANFA (Hepatocyte growth factor receptor OS=Canis familiaris GN=MET PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPRAELRPSFSELVSRI 1338          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_BOVIN (Hepatocyte growth factor receptor OS=Bos taurus GN=MET PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.623e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAELRPSFSELVSRI 1338          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_PIG (Hepatocyte growth factor receptor OS=Sus scrofa GN=MET PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1214 EKFTVKVADFGLARDVYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPRAELRPSFSELVSRI 1337          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_ECHTE (Hepatocyte growth factor receptor OS=Echinops telfairi GN=MET PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 47/123 (38.21%), Postives = 70/123 (56.91%), Query Frame = 3
Query:   39 WTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPSF ELV ++
Sbjct: 1215 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFTELVSRI 1336          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FGFR1_DROME (Fibroblast growth factor receptor homolog 1 OS=Drosophila melanogaster GN=htl PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 45/134 (33.58%), Postives = 68/134 (50.75%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTKTGKGTP--QWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV---DKLRDLQRQY 413
            S  + +K+ DFGL+R    T    K   G    +WMAPE L+ +  D KSDV+S+G++LWE+ T  + P+  + S + +       QR+E P         ++  CWH +   RP F E+V   DKL   +  Y
Sbjct:  565 SDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEELYTYLMSGQRMEKPAKCSMNIYILMRQCWHFNADDRPPFTEIVEYMDKLLQTKEDY 698          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: BMX_MOUSE (Cytoplasmic tyrosine-protein kinase BMX OS=Mus musculus GN=Bmx PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.119e-13
Identity = 43/125 (34.40%), Postives = 69/125 (55.20%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWEL-ATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 410
            +VKV DFG++R   +    +  G   P +W APEV        KSDV++FG+++WE+ +  K P+D  ++ +V+  V     RL  P+        I+ SCWH  P+ RP+FQ+L+  +  L+ Q
Sbjct:  525 SVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSEVVVKVS-QGHRLYRPQLASDTIYQIMYSCWHELPEKRPTFQQLLSAIEPLREQ 648          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: Y0138_DICDI (Probable serine/threonine-protein kinase DDB_G0278509 OS=Dictyostelium discoideum GN=DDB_G0278509 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.768e-13
Identity = 37/101 (36.63%), Postives = 61/101 (60.40%), Query Frame = 3
Query:  126 WMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASR 428
            + APE+L ++   EKSDV+SFG ILWEL T KIP+D ++  +V   +    +RLEIP++ +     I++ CW+   + RP+F  +  +L +L +   +  R
Sbjct: 1148 YAAPEILNSKHFSEKSDVFSFGTILWELVTNKIPFDGMDPYEVKELLK-SGKRLEIPENCNEVLKNIIQDCWNQQSEDRPTFLSIYHRLENLMKSITKKRR 1247          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
ROCO8_DICDI1.623e-1333.33Probable serine/threonine-protein kinase roco8 OS=... [more]
MET_SHEEP1.623e-1337.60Hepatocyte growth factor receptor OS=Ovis aries GN... [more]
MET_LOXAF1.623e-1337.60Hepatocyte growth factor receptor OS=Loxodonta afr... [more]
MET_CANFA1.623e-1337.60Hepatocyte growth factor receptor OS=Canis familia... [more]
MET_BOVIN1.623e-1337.60Hepatocyte growth factor receptor OS=Bos taurus GN... [more]
MET_PIG2.119e-1337.60Hepatocyte growth factor receptor OS=Sus scrofa GN... [more]
MET_ECHTE2.119e-1338.21Hepatocyte growth factor receptor OS=Echinops telf... [more]
FGFR1_DROME2.119e-1333.58Fibroblast growth factor receptor homolog 1 OS=Dro... [more]
BMX_MOUSE2.119e-1334.40Cytoplasmic tyrosine-protein kinase BMX OS=Mus mus... [more]
Y0138_DICDI2.768e-1336.63Probable serine/threonine-protein kinase DDB_G0278... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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