EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: NTRK1_HUMAN (High affinity nerve growth factor receptor OS=Homo sapiens GN=NTRK1 PE=1 SV=4)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHETSLTTKTGKGTP--QWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            Q   VK+GDFG+SR  + T      G+     +WM PE +       +SDV+SFGV+LWE+ T  K PW  L++ + I  +    + LE P+   P   AI+  CW  +PQ R S +++  +L+ L
Sbjct:  660 QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI-TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 784          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_RAT (Hepatocyte growth factor receptor OS=Rattus norvegicus GN=Met PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 46/128 (35.94%), Postives = 71/128 (55.47%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH   + RPS  ELV ++  +
Sbjct: 1215 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITIYL-LQGRRLLQPEYCPDALYEVMLKCWHPKAEMRPSVSELVSRISSI 1341          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: GBPC_DICDI (Cyclic GMP-binding protein C OS=Dictyostelium discoideum GN=gbpC PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 36/101 (35.64%), Postives = 54/101 (53.47%), Query Frame = 3
Query:  120 PQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG---FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQY 413
            P W+ PEVL      E SDVYSFG+ILWEL T   P+D     Q +  +        R  IP    P +  +++SCW  +P  RP+F  +V+ L  +++++
Sbjct: 1066 PLWLGPEVLAGTAYSEPSDVYSFGIILWELYTRAHPFDEFQFGQWMSKLEDEIIRGLRPTIPPTCPPEYVELIQSCWTHEPNSRPTFTSIVEILGQIKKKF 1166          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FGFR4_RAT (Fibroblast growth factor receptor 4 OS=Rattus norvegicus GN=Fgfr4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 44/124 (35.48%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGT--PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT------EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +K+ DFGL+R  H      KT  G    +WMAPE L +     +SDV+SFG++LWE+ T        IP + L S+   G       R+E P +       ++  CWH+ P  RP+F++LV+ L
Sbjct:  624 MKIADFGLARGVHHIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILLWEIFTLGGSPYPGIPVEELFSLLREG------HRMERPPNCPSELYGLMRECWHAAPSQRPTFKQLVEAL 741          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: BMX_HUMAN (Cytoplasmic tyrosine-protein kinase BMX OS=Homo sapiens GN=BMX PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.167e-13
Identity = 43/124 (34.68%), Postives = 67/124 (54.03%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWEL-ATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 410
            VKV DFG++R   +    +  G   P +W APEV        KSDV++FG+++WE+ +  K P+D  ++ QV+  V     RL  P         I+ SCWH  P+ RP+FQ+L+  +  L+ +
Sbjct:  550 VKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKQPYDLYDNSQVVLKVS-QGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 672          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ZAKA_DICDI (Dual specificity protein kinase zakA OS=Dictyostelium discoideum GN=zakA PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 44/135 (32.59%), Postives = 75/135 (55.56%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVG--FMNQRLEIPKDVDPRWAAIVESCWHSDPQCRP-SFQELVDKLRDLQRQYFQAS 425
            S  +T KV DFGLS  + E+    K   G+  +MAPE L   P +EKSD+YSFG+++W++ +   P    +  ++   V     N R +IP +V  ++  ++  CW  +P  RP  F  +++KL+++   Y ++S
Sbjct:  529 SNEFTAKVCDFGLSSNQSESK---KLRGGSIHYMAPENLNGSPINEKSDIYSFGLLVWQMFSYAPPNTIYSPKEMASMVSDPKQNYRPQIPFNVPLKFKELITQCWDRNPLNRPKDFSIIIEKLKEIGLTYNRSS 660          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ROC11_DICDI (Probable serine/threonine-protein kinase roco11 OS=Dictyostelium discoideum GN=roco11 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 3
Query:   48 KVGDFGLSRLKHETSLTTKTGK-GTPQWMAPEVLRNEPS-DEKSDVYSFGVILWELATEKIPWDNLNS---MQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            KV DFGLS    + SL + +G  G  QWMAPE +  E S  EK D YSF +IL+ + T + P+D   S   M+ I  +   + R  IP D  P  + ++E CW  DP+ RP F  +V +L
Sbjct: 1333 KVADFGLS----QQSLYSVSGLLGNFQWMAPETIGAEESYTEKIDTYSFSMILFTILTGECPFDEFTSFGKMEFIRKIREEDLRPTIPSDCPPTISNLIELCWSGDPKKRPHFSYIVKEL 1448          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FAK1_RAT (Focal adhesion kinase 1 OS=Rattus norvegicus GN=Ptk2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 3
Query:   45 VKVGDFGLSR-LKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            VK+GDFGLSR ++  T      GK   +WMAPE +        SDV+ FGV +WE+    + P+  + +  VIG +    +RL +P +  P   +++  CW  DP  RP F EL  +L
Sbjct:  560 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 676          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FAK1_MOUSE (Focal adhesion kinase 1 OS=Mus musculus GN=Ptk2 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 3
Query:   45 VKVGDFGLSR-LKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            VK+GDFGLSR ++  T      GK   +WMAPE +        SDV+ FGV +WE+    + P+  + +  VIG +    +RL +P +  P   +++  CW  DP  RP F EL  +L
Sbjct:  598 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 714          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FAK1_HUMAN (Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.054e-13
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 3
Query:   45 VKVGDFGLSR-LKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            VK+GDFGLSR ++  T      GK   +WMAPE +        SDV+ FGV +WE+    + P+  + +  VIG +    +RL +P +  P   +++  CW  DP  RP F EL  +L
Sbjct:  560 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 676          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
NTRK1_HUMAN6.167e-1335.71High affinity nerve growth factor receptor OS=Homo... [more]
MET_RAT6.167e-1335.94Hepatocyte growth factor receptor OS=Rattus norveg... [more]
GBPC_DICDI6.167e-1335.64Cyclic GMP-binding protein C OS=Dictyostelium disc... [more]
FGFR4_RAT6.167e-1335.48Fibroblast growth factor receptor 4 OS=Rattus norv... [more]
BMX_HUMAN6.167e-1334.68Cytoplasmic tyrosine-protein kinase BMX OS=Homo sa... [more]
ZAKA_DICDI8.054e-1332.59Dual specificity protein kinase zakA OS=Dictyostel... [more]
ROC11_DICDI8.054e-1340.00Probable serine/threonine-protein kinase roco11 OS... [more]
FAK1_RAT8.054e-1336.44Focal adhesion kinase 1 OS=Rattus norvegicus GN=Pt... [more]
FAK1_MOUSE8.054e-1336.44Focal adhesion kinase 1 OS=Mus musculus GN=Ptk2 PE... [more]
FAK1_HUMAN8.054e-1336.44Focal adhesion kinase 1 OS=Homo sapiens GN=PTK2 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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