EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702992_ssr848 microsatellite EY702992_ssr848:848..859. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K13_HUMAN (Mitogen-activated protein kinase kinase kinase 13 OS=Homo sapiens GN=MAP3K13 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.160e-19
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            VK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  +++  W S P+ RPSF++ +        D L   Q  YF++
Sbjct:  293 VKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASADVLATPQETYFKS 425          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K9_MOUSE (Mitogen-activated protein kinase kinase kinase 9 OS=Mus musculus GN=Map3k9 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19
Identity = 48/135 (35.56%), Postives = 76/135 (56.30%), Query Frame = 3
Query:   12 RVRSSSSQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYF 416
            +V +    +  +++ DFGL+R  H T  T  +  GT  WMAPEV+R     + SDV+S+GV+LWEL T ++P+  ++ + V   V      L IP      +A ++E CW+ DP  RPSF  ++D+L  ++   F
Sbjct:  272 KVENGDLSNKILEITDFGLAREWHRT--TKMSAAGTYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTSILDQLTTIEESGF 404          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K11_RAT (Mitogen-activated protein kinase kinase kinase 11 OS=Rattus norvegicus GN=Map3k11 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19
Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 3
Query:   15 VRSSSSQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 410
            +     +H T+K+ DFGL+R  H+T  T  +  GT  WMAPEV++     + SDV+SFGV+LWEL T ++P+  ++ + V   V      L IP      +A ++  CW  DP  RP F  ++ +L  L+ Q
Sbjct:  254 IEGDDMEHKTLKITDFGLAREWHKT--TQMSAAGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFAQLMADCWAQDPHRRPDFASILQQLEALEAQ 383          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K11_MOUSE (Mitogen-activated protein kinase kinase kinase 11 OS=Mus musculus GN=Map3k11 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.979e-19
Identity = 48/132 (36.36%), Postives = 73/132 (55.30%), Query Frame = 3
Query:   15 VRSSSSQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQ 410
            +     +H T+K+ DFGL+R  H+T  T  +  GT  WMAPEV++     + SDV+SFGV+LWEL T ++P+  ++ + V   V      L IP      +A ++  CW  DP  RP F  ++ +L  L+ Q
Sbjct:  254 IEGDDMEHKTLKITDFGLAREWHKT--TQMSAAGTYAWMAPEVIKASTFSKGSDVWSFGVLLWELLTGEVPYRGIDCLAVAYGVAVNKLTLPIPSTCPEPFAQLMADCWAQDPHRRPDFASILQQLEALEAQ 383          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K13_PONAB (Mitogen-activated protein kinase kinase kinase 13 OS=Pongo abelii GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19
Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            VK+ DFG S+   + S T  +  GT  W+APEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  +++  W S P+ RPSF++ +        D L   Q  YF++
Sbjct:  293 VKISDFGTSKELSDKS-TKMSFAGTVAWLAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASADVLATPQETYFKS 425          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            +K+ DFG SR  + T  T  +  GT  WMAPEV+++ P  E  D YS+GV+LWE+ T ++P+  L  +QV   V   N+RL IP      +A ++  CW +D + RPSF++++  L  +
Sbjct:  147 LKICDFGASRFHNHT--THMSLVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESM 263          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.409e-19
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            +K+ DFG SR  + T  T  +  GT  WMAPEV+++ P  E  D YS+GV+LWE+ T ++P+  L  +QV   V   N+RL IP      +A ++  CW +D + RPSF++++  L  +
Sbjct:  147 LKICDFGASRFHNHT--THMSLVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESM 263          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.521e-19
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 383
            VKV DFG S L+ +     K   GT +WMAPE+++ +P   K DVYSFG++LWEL T  +P+  +  +Q   AV   N+R  +P    P  A +++ CW  +P  RP F  +V
Sbjct:  226 VKVADFGTSCLETQCR-EAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDFSNIV 337          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: M3K13_BOVIN (Mitogen-activated protein kinase kinase kinase 13 OS=Bos taurus GN=MAP3K13 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.822e-19
Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV--------DKLRDLQRQYFQA 422
            VK+ DFG S+   + S T  +  GT  WMAPEV+RNEP  EK D++SFGV+LWEL T +IP+ +++S  +I  VG  +  L +P      +  +++  W S  + RPSF++ +        D L   Q  YF++
Sbjct:  293 VKISDFGTSKELSDKS-TKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKTRNRPSFRQTLMHLDIASADVLATPQETYFKS 425          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.283e-18
Identity = 49/123 (39.84%), Postives = 73/123 (59.35%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLK--HETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVI-GAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            ++  VK+ DFGLS LK  H+      + KGTP +MAPEV+  +  +E SDVYSFG++LWE+ T K P+ +   ++    AV   ++R  IP D       ++E CW  +P  RPSF+E++  L
Sbjct:  157 ENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEPFSHHRELEKFREAVCVKHERPPIPNDCLDSLRRLIEKCWDKEPISRPSFKEIISAL 279          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
M3K13_HUMAN1.160e-1938.81Mitogen-activated protein kinase kinase kinase 13 ... [more]
M3K9_MOUSE1.979e-1935.56Mitogen-activated protein kinase kinase kinase 9 O... [more]
M3K11_RAT1.979e-1936.36Mitogen-activated protein kinase kinase kinase 11 ... [more]
M3K11_MOUSE1.979e-1936.36Mitogen-activated protein kinase kinase kinase 11 ... [more]
M3K13_PONAB2.585e-1938.06Mitogen-activated protein kinase kinase kinase 13 ... [more]
MLTK_MOUSE4.409e-1938.66Mitogen-activated protein kinase kinase kinase MLT... [more]
MLTK_HUMAN4.409e-1938.66Mitogen-activated protein kinase kinase kinase MLT... [more]
HT1_ARATH7.521e-1939.82Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
M3K13_BOVIN9.822e-1938.06Mitogen-activated protein kinase kinase kinase 13 ... [more]
SHKC_DICDI1.283e-1839.84Dual specificity protein kinase shkC OS=Dictyostel... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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