EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: EPHA3_RAT (Ephrin type-A receptor 3 OS=Rattus norvegicus GN=Epha3 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 3
Query:   48 KVGDFGLSRLKH---ETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWE-LATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 407
            KV DFGLSR+     E + TT+ GK   +W +PE          SDV+S+G++LWE ++  + P+  +++  VI AV     RL +P D       ++  CW  D   RP F+++V  L  L R
Sbjct:  762 KVSDFGLSRVLEDDPEAAYTTRGGKIPVRWTSPEATAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EGYRLPLPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 884          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ACK1_MOUSE (Activated CDC42 kinase 1 OS=Mus musculus GN=Tnk2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 3
Query:   45 VKVGDFGLSRL--KHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            VK+GDFGL R   +++     +  +  P  W APE L+       SD + FGV LWE+ T  + PW  LN  Q++  +    +RL  P+D       ++  CW   P+ RP+F  L D L + Q
Sbjct:  266 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 389          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ACK1_HUMAN (Activated CDC42 kinase 1 OS=Homo sapiens GN=TNK2 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 3
Query:   45 VKVGDFGLSRL--KHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            VK+GDFGL R   +++     +  +  P  W APE L+       SD + FGV LWE+ T  + PW  LN  Q++  +    +RL  P+D       ++  CW   P+ RP+F  L D L + Q
Sbjct:  266 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 389          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ACK1_BOVIN (Activated CDC42 kinase 1 OS=Bos taurus GN=TNK2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.163e-11
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 3
Query:   45 VKVGDFGLSRL--KHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            VK+GDFGL R   +++     +  +  P  W APE L+       SD + FGV LWE+ T  + PW  LN  Q++  +    +RL  P+D       ++  CW   P+ RP+F  L D L + Q
Sbjct:  266 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 389          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FGFR4_DANRE (Fibroblast growth factor receptor 4 OS=Danio rerio GN=fgfr4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 42/124 (33.87%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKT--GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT------EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +K+ DFGL+R  H+     KT  G+   +WMAPE L +     +SDV+SFGV++WE+ T        IP + L  +   G       R++ P +        +  CWH+ P  RP+F++LV++L
Sbjct:  737 MKIADFGLARGVHQIDYYKKTTNGRMPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG------HRMDKPSNCTHELYMKMRECWHAVPTQRPTFKQLVEEL 854          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FGFR3_MOUSE (Fibroblast growth factor receptor 3 OS=Mus musculus GN=Fgfr3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 44/125 (35.20%), Postives = 63/125 (50.40%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGT--PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-------EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +K+ DFGL+R  H      KT  G    +WMAPE L +     +SDV+SFGV+LWE+ T         IP + L  +   G       R++ P         I+  CWH+ P  RP+F++LV+ L
Sbjct:  625 MKIADFGLARDVHNLDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTPGGPSPYPGIPVEELFKLLKEG------HRMDKPASCTHDLYMIMRECWHAVPSQRPTFKQLVEDL 743          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FGFR1_XENLA (Fibroblast growth factor receptor 1 OS=Xenopus laevis GN=fgfr1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGT--PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT------EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +K+ DFGL+R  H      KT  G    +WMAPE L +     +SDV+SFGV+LWE+ T        +P + L  +   G       R++ P +       +++ CWH+ P  RP+F +LV+ L
Sbjct:  631 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPMEELFKLLKEG------HRMDKPTNCTNELYMMMKDCWHAMPSQRPTFNQLVEDL 748          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: EPHA5_HUMAN (Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 3
Query:   48 KVGDFGLSRLKH---ETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 407
            KV DFGLSR+     E + TT+ GK   +W APE +        SDV+S+G+++WE+ +  + P+  + +  VI AV     RL  P D       ++  CW  +   RP F E+V+ L  L R
Sbjct:  815 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVE-EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIR 937          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ACK1_RAT (Activated CDC42 kinase 1 OS=Rattus norvegicus GN=Tnk2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.519e-11
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 3
Query:   45 VKVGDFGLSRL--KHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            VK+GDFGL R   +++     +  +  P  W APE L+       SD + FGV LWE+ T  + PW  LN  Q++  +    +RL  P+D       ++  CW   P+ RP+F  L D L + Q
Sbjct:  266 VKIGDFGLMRALPQNDGHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 389          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: NTRK1_CHICK (High affinity nerve growth factor receptor (Fragment) OS=Gallus gallus GN=NTRK1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.984e-11
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTP--QWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            VK+GDFG+SR  + T      G+     +WM PE +       +SD++SFGV+LWE+ T  K PW  L++ + I  +    + LE P+        I++SCW  +PQ R S Q++  +L+ L
Sbjct:  647 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI-TQGRELERPRTCPSEVYDIMQSCWQREPQQR-SIQDIHSRLQAL 766          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
EPHA3_RAT1.163e-1134.68Ephrin type-A receptor 3 OS=Rattus norvegicus GN=E... [more]
ACK1_MOUSE1.163e-1133.87Activated CDC42 kinase 1 OS=Mus musculus GN=Tnk2 P... [more]
ACK1_HUMAN1.163e-1133.87Activated CDC42 kinase 1 OS=Homo sapiens GN=TNK2 P... [more]
ACK1_BOVIN1.163e-1133.87Activated CDC42 kinase 1 OS=Bos taurus GN=TNK2 PE=... [more]
FGFR4_DANRE1.519e-1133.87Fibroblast growth factor receptor 4 OS=Danio rerio... [more]
FGFR3_MOUSE1.519e-1135.20Fibroblast growth factor receptor 3 OS=Mus musculu... [more]
FGFR1_XENLA1.519e-1133.87Fibroblast growth factor receptor 1 OS=Xenopus lae... [more]
EPHA5_HUMAN1.519e-1134.68Ephrin type-A receptor 5 OS=Homo sapiens GN=EPHA5 ... [more]
ACK1_RAT1.519e-1133.87Activated CDC42 kinase 1 OS=Rattus norvegicus GN=T... [more]
NTRK1_CHICK1.984e-1135.25High affinity nerve growth factor receptor (Fragme... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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