EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: VGFR3_MOUSE (Vascular endothelial growth factor receptor 3 OS=Mus musculus GN=Flt4 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 42/122 (34.43%), Postives = 66/122 (54.10%), Query Frame = 3
Query:   45 VKVGDFGLSR-LKHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWEL-ATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            VK+ DFGL+R +  +     K     P +WMAPE + ++    +SDV+SFGV+LWE+ +    P+  +   +          R+  P+   P    I++SCW  DP+ RP+F +LV+ L DL
Sbjct: 1051 VKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPELATPAIRHIMQSCWSGDPKARPAFSDLVEILGDL 1172          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: TYRO3_DANRE (Tyrosine-protein kinase receptor TYRO3 OS=Danio rerio GN=tyro3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 40/124 (32.26%), Postives = 68/124 (54.84%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTK--TGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            +++ +V V DFGLS+  +      +    K   +W+A E L +     +SDV++FGV +WE+ T  + P+  + + ++   +    +RL+ P D       I+ SCW   P+CRPSFQ L+D+L
Sbjct:  643 NENMSVCVADFGLSKKIYSGDYYRQGSVSKLPVKWIALESLADNVYTTQSDVWAFGVTMWEIMTRGQTPYPGVENSEIYEYL-IKGERLKQPPDCPADIYEIMHSCWSPVPKCRPSFQHLIDQL 765          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: SRC_RSVSE (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain Schmidt-Ruppin E) GN=V-SRC PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 40/117 (34.19%), Postives = 63/117 (53.85%), Query Frame = 3
Query:   48 KVGDFGLSRLKHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            KV DFGL+RL  +   T + G   P +W APE         KSDV+SFG++L EL T+ ++P+  + + +V+  V     R+  P +       ++  CW  DP+ RP+F+ L  +L
Sbjct:  401 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMGNGEVLDRVE-RGYRMPCPPECPESLHDLMSQCWRRDPEERPTFEYLQAQL 516          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MIL_AVIMH (Serine/threonine-protein kinase-transforming protein mil OS=Avian retrovirus MH2 GN=V-MIL PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 46/139 (33.09%), Postives = 81/139 (58.27%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGK--GTPQWMAPEVLRNEPSDE---KSDVYSFGVILWELATEKIPWDNLNSM-QVIGAV--GFMNQRL-EIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRS 431
            TVK+GDFGL+ +K   S + +  +  G+  WMAPEV+R + S+    +SDVYS+G++L+EL T ++P+ ++N+  Q+I  V  G+ +  L ++ K+       +V  C     + RP F +++  +  LQ    + +RS
Sbjct:  214 TVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIALLQHSLPKINRS 352          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FGFR_STRPU (Fibroblast growth factor receptor OS=Strongylocentrotus purpuratus GN=FGFR PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTKT--GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            ++ + +K+ DFGL+R  H      KT  G+   +WMAPE L +     +SDV+SFG++LWE+ T    P+ ++   Q+   +    +RLE P++       I+  CW + P  RP+F ELV+ L
Sbjct:  790 TEDFEMKICDFGLARDIHYIDFYRKTTDGRLPVKWMAPEALFDRMFTTQSDVWSFGILLWEIMTLGGTPYPSVPVEQMFDYLR-SGKRLEKPQNTSLEIYHILCECWRTSPGQRPTFCELVEDL 912          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: EPA4B_XENLA (Ephrin type-A receptor 4-B OS=Xenopus laevis GN=epha4-B PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 45/138 (32.61%), Postives = 70/138 (50.72%), Query Frame = 3
Query:   48 KVGDFGLSRLKH---ETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDS 446
            KV DFG+SR+     E + TT+ GK   +W APE +        SDV+S+G+++WE+ +  E+  WD +++  VI A+     RL  P D       ++  CW  D   RP F ++V  L  L R      R+ + +S
Sbjct:  760 KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD-MSNQDVIKAIE-EGYRLPPPMDCPIALHQLMLDCWQKDRSDRPKFGQIVSMLDKLIRNPNSLKRTGLENS 895          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: DST4_DICDI (Serine/threonine-protein kinase dst4 OS=Dictyostelium discoideum GN=dst4 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.419e-11
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = 3
Query:   48 KVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLR----NEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMN-QRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVD 386
            K+ DFG+S +   T    KT  G+P WM+PEV+     +   D K+D++S G+   E+A  K P  NLN ++VI  + F     LE+P +  P +   +  C + +   RPS  +L++
Sbjct:  157 KLADFGVSAILVNTGFKQKTVVGSPYWMSPEVISPPKGSNGYDSKADIWSLGITAIEMAESKPPLFNLNPVKVIFVIPFRQAPTLEVPGNWSPEFNDFISVCLNKEADKRPSAVDLLN 274          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: STK4_DICDI (Serine/threonine-protein kinase 4 homolog A OS=Dictyostelium discoideum GN=krsA PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 3
Query:   48 KVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQ---RLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 383
            K+ DFG+S    +T    +T  GTP WMAPEV++    D K+D++S+G+   E+A  K P  N++ M+VI  +   ++   +L  P+   P +   +  C    P+ RPS +EL+
Sbjct:  154 KLADFGVSGQLSDTMAKRQTVIGTPFWMAPEVIQEIGYDYKADIWSYGITCIEMAESKPPLFNVHPMRVIFMIPNPSRPPPKLTEPEKWSPEFNDFLAKCLTRKPELRPSAEELL 268          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: SRK3_SPOLA (Tyrosine-protein kinase SRK3 (Fragment) OS=Spongilla lacustris GN=SRK3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 3
Query:   48 KVGDFGLSRLKHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRD 398
            KV DFGL+R+  E     + G   P +W APE         KSDV+SFGV++ E+ T  ++P+  + + QV+ AV     R+  P+        I+ SCW  +P  RP+F+ L + L D
Sbjct:  201 KVADFGLARVIKEDIYNPREGTKFPIKWTAPEAALYNRFTIKSDVWSFGVLISEIVTHGRMPYPGMTNRQVLEAVD-RGYRMPCPEGCPDPLYKIMLSCWKHEPDDRPTFESLKNLLED 318          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: SRC_AVIS2 (Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain PR2257) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 3
Query:   48 KVGDFGLSRLKHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATE-KIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTV 437
            KV DFGL+RL  +   T + G   P +W APE         KSDV+SFG++L EL T+ ++P+  + + +V+  V     R+  P +       ++  CW  DP+ RP+F+ L   L D    YF ++   V
Sbjct:  401 KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLED----YFTSTEPPV 527          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
VGFR3_MOUSE4.419e-1134.43Vascular endothelial growth factor receptor 3 OS=M... [more]
TYRO3_DANRE4.419e-1132.26Tyrosine-protein kinase receptor TYRO3 OS=Danio re... [more]
SRC_RSVSE4.419e-1134.19Tyrosine-protein kinase transforming protein Src O... [more]
MIL_AVIMH4.419e-1133.09Serine/threonine-protein kinase-transforming prote... [more]
FGFR_STRPU4.419e-1134.68Fibroblast growth factor receptor OS=Strongylocent... [more]
EPA4B_XENLA4.419e-1132.61Ephrin type-A receptor 4-B OS=Xenopus laevis GN=ep... [more]
DST4_DICDI4.419e-1133.05Serine/threonine-protein kinase dst4 OS=Dictyostel... [more]
STK4_DICDI5.772e-1133.91Serine/threonine-protein kinase 4 homolog A OS=Dic... [more]
SRK3_SPOLA5.772e-1135.29Tyrosine-protein kinase SRK3 (Fragment) OS=Spongil... [more]
SRC_AVIS25.772e-1133.33Tyrosine-protein kinase transforming protein Src O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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