EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: RMIL_AVII1 (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian retrovirus IC10 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 52/169 (30.77%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGK--GTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAV--GFMNQRLEIPKDVDPR-WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQKE--L*TIFTLFPCSVAETHVIA 515
            TVK+GDFGL+ +K   S + +  +  G+  WMAPEV+R +   P   +SDVY+FG++L+EL T ++P+ N+N+  Q+I  V  G+++  L   +   P+    ++  C       RP F +++  +  L R   +  RS    S  +       F+L+ C+  +T + A
Sbjct:  199 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQA 367          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: RMIL_AVEVR (Serine/threonine-protein kinase-transforming protein Rmil OS=Avian rous-associated virus type 1 GN=V-RMIL PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 52/169 (30.77%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGK--GTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAV--GFMNQRLEIPKDVDPR-WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQKE--L*TIFTLFPCSVAETHVIA 515
            TVK+GDFGL+ +K   S + +  +  G+  WMAPEV+R +   P   +SDVY+FG++L+EL T ++P+ N+N+  Q+I  V  G+++  L   +   P+    ++  C       RP F +++  +  L R   +  RS    S  +       F+L+ C+  +T + A
Sbjct:  215 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQA 383          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: RET_MOUSE (Proto-oncogene tyrosine-protein kinase receptor Ret OS=Mus musculus GN=Ret PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 47/145 (32.41%), Postives = 70/145 (48.28%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGT--PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT------EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQEL---VDKLRDLQRQYFQASRSTVGDS 446
            +K+ DFGLSR  +E     K  KG    +WMA E L +     +SDV+SFGV+LWE+ T        IP + L ++   G       R+E P +       ++  CW  +P  RP F ++   ++K+    R Y   + ST  DS
Sbjct:  889 MKISDFGLSRDVYEEDSYVKKSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKSRDYLDLAASTPSDS 1027          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: GDT4_DICDI (Probable serine/threonine-protein kinase gdt4 OS=Dictyostelium discoideum GN=gdt4 PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 43/140 (30.71%), Postives = 77/140 (55.00%), Query Frame = 3
Query:   48 KVGDFGLSRL---KHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDV--DPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQ 452
            K+ DFG  R    KHE  L +K G  T ++M+PE+L   P    +DVYSF ++ +EL + ++P+  +   ++   V  +  R  + +DV  D   + I+ +CW+ +P+ RP+F  L+D L  L ++Y + ++    +  Q
Sbjct: 1486 KISDFGTCREINGKHE--LNSKAG--TTRYMSPEILEGLPYTYSTDVYSFAILFFELLSGRVPFREIPKREIPRFVR-LGTRPRLDQDVFADNDISLILLACWNPNPRGRPTFDTLIDLLEKLLKKYKERAKRNKKNQNQ 1620          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: FGFR4_XENLA (Fibroblast growth factor receptor 4 OS=Xenopus laevis GN=fgfr4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 39/120 (32.50%), Postives = 62/120 (51.67%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGT--PQWMAPEVLRNEPSDEKSDVYSFGVILWELAT------EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQEL 380
            +K+ DFGL+R  H+     KT  G    +WMAPE L +     +SD++SFGV+ WE+ T        IP++ L  +   G       R++ P +       ++  CWH+ P  RP+F++L
Sbjct:  649 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDIWSFGVLTWEIFTLGGSPYPVIPYEELFKLLREG------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQL 762          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: EPHB2_MOUSE (Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 3
Query:   48 KVGDFGLSR-LKHETSLTTKT----GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 407
            KV DFGLSR L+ +TS  T T    GK   +W APE ++       SDV+S+G+++WE+ +  E+  WD + +  VI A+   + RL  P D       ++  CW  D   RP F ++V+ L  + R
Sbjct:  769 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD-MTNQDVINAIE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 893          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: EPHB2_HUMAN (Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 PE=1 SV=5)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 45/127 (35.43%), Postives = 68/127 (53.54%), Query Frame = 3
Query:   48 KVGDFGLSR-LKHETSLTTKT----GKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT--EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 407
            KV DFGLSR L+ +TS  T T    GK   +W APE ++       SDV+S+G+++WE+ +  E+  WD + +  VI A+   + RL  P D       ++  CW  D   RP F ++V+ L  + R
Sbjct:  761 KVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD-MTNQDVINAIE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 885          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: EPHA2_MOUSE (Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 44/126 (34.92%), Postives = 66/126 (52.38%), Query Frame = 3
Query:   48 KVGDFGLSRLKH---ETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAV--GFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQR 407
            KV DFGLSR+     E + TT  GK   +W APE +        SDV+S+G+++WE+ T  + P+  L++ +V+ A+  GF   RL  P D       ++  CW  +   RP F ++V  L  L R
Sbjct:  755 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMTYGERPYWELSNHEVMKAINDGF---RLPTPMDCPSAIYQLMMQCWQQERSRRPKFADIVSILDKLIR 877          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 52/169 (30.77%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGK--GTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAV--GFMNQRLEIPKDVDPR-WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQKE--L*TIFTLFPCSVAETHVIA 515
            TVK+GDFGL+ +K   S + +  +  G+  WMAPEV+R +   P   +SDVY+FG++L+EL T ++P+ N+N+  Q+I  V  G+++  L   +   P+    ++  C       RP F +++  +  L R   +  RS    S  +       F+L+ C+  +T + A
Sbjct:  626 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQA 794          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 52/169 (30.77%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGK--GTPQWMAPEVLRNE---PSDEKSDVYSFGVILWELATEKIPWDNLNSM-QVIGAV--GFMNQRLEIPKDVDPR-WAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQASRSTVGDSTQKE--L*TIFTLFPCSVAETHVIA 515
            TVK+GDFGL+ +K   S + +  +  G+  WMAPEV+R +   P   +SDVY+FG++L+EL T ++P+ N+N+  Q+I  V  G+++  L   +   P+    ++  C       RP F +++  +  L R   +  RS    S  +       F+L+ C+  +T + A
Sbjct:  589 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQA 757          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
RMIL_AVII15.772e-1130.77Serine/threonine-protein kinase-transforming prote... [more]
RMIL_AVEVR5.772e-1130.77Serine/threonine-protein kinase-transforming prote... [more]
RET_MOUSE5.772e-1132.41Proto-oncogene tyrosine-protein kinase receptor Re... [more]
GDT4_DICDI5.772e-1130.71Probable serine/threonine-protein kinase gdt4 OS=D... [more]
FGFR4_XENLA5.772e-1132.50Fibroblast growth factor receptor 4 OS=Xenopus lae... [more]
EPHB2_MOUSE5.772e-1135.43Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 ... [more]
EPHB2_HUMAN5.772e-1135.43Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 ... [more]
EPHA2_MOUSE5.772e-1134.92Ephrin type-A receptor 2 OS=Mus musculus GN=Epha2 ... [more]
BRAF1_MOUSE5.772e-1130.77B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN5.772e-1130.77B-Raf proto-oncogene serine/threonine-protein kina... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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