EY702992

Overview
NameEY702992
Unique NameEY702992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702992_ssr848 microsatellite EY702992_ssr848:848..859. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: CSK_HUMAN (Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.605e-15
Identity = 44/126 (34.92%), Postives = 71/126 (56.35%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEL-ATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            S+    KV DFGL++   E S T  TGK   +W APE LR +    KSDV+SFG++LWE+ +  ++P+  +    V+  V     +++ P    P    ++++CWH D   RPSF +L ++L  ++
Sbjct:  323 SEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 444          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: CSK_BOVIN (Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.124e-14
Identity = 44/126 (34.92%), Postives = 71/126 (56.35%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEL-ATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            S+    KV DFGL++   E S T  TGK   +W APE LR +    KSDV+SFG++LWE+ +  ++P+  +    V+  V     +++ P    P    ++++CWH D   RPSF +L ++L  ++
Sbjct:  323 SEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVYEVMKNCWHLDAATRPSFLQLREQLERIK 444          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: Y1197_DICDI (Probable serine/threonine-protein kinase DDB_G0288147 OS=Dictyostelium discoideum GN=DDB_G0288147 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELV 383
            +++W VK+ DFG+SR     +    T  GTP +MA E+   +P  + +DV+SFGV+LWE+ T+  P+ NL  ++    V     R  IP  V    A ++ESCW   P  RP+F E++
Sbjct:  733 NENWEVKLIDFGVSRFVE--ARLGYTIVGTPNYMACELFNGQPYHQPADVFSFGVVLWEMFTQDTPYKNLTRIEQALFVQ-SGGRPTIPPTVPTTIANLIESCWVQTPHLRPTFTEIL 847          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: RIPK4_MOUSE (Receptor-interacting serine/threonine-protein kinase 4 OS=Mus musculus GN=Ripk4 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 3
Query:   36 HWTVKVGDFGLSR---LKHETSLTTKTGKGTPQWMAPEVLRNEPS--DEKSDVYSFGVILWELATEKIPW-DNLNSMQVIGAVGFMNQRLEIPKDVDPRWAA------IVESCWHSDPQCRPSFQELVDKLRDL 401
            H+ VK+ DFGL++   + H   L+     GT  ++ PE +R +    D K DVYSF +++W + T+K P+ D  N + ++  V     R E+P    PR  A      +++ CWH+DPQ RP+FQE+  +  DL
Sbjct:  154 HYHVKISDFGLAKCNGMSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPFADEKNILHIMMKV-VKGHRPELPPICRPRPRACASLIGLMQRCWHADPQVRPTFQEITSETEDL 286          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: INSR_AEDAE (Insulin-like receptor OS=Aedes aegypti GN=InR PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 3
Query:   42 TVKVGDFGLSRLKHETSLTTKTGKG--TPQWMAPEVLRNEPSDEKSDVYSFGVILWELAT-EKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQRQYFQ 419
            TVK+GDFG++R  +ET    K  KG    +WMAPE L++      SDV+S+GV+LWE+AT    P+  L + QV+  V      +E P++       ++  CW   P  RP+F E++ +L      +FQ
Sbjct: 1176 TVKIGDFGMTRDIYETDYYRKGTKGFLPVRWMAPESLKDGIFSSSSDVFSYGVVLWEMATLASQPYQGLTNDQVLRYV-IDGGVMERPENCPDNLYNLMRRCWQHRPTARPTFMEIISELLPDASPHFQ 1303          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: ROCO9_DICDI (Probable serine/threonine-protein kinase roco9 OS=Dictyostelium discoideum GN=roco9 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 45/134 (33.58%), Postives = 74/134 (55.22%), Query Frame = 3
Query:    9 PRVRSSSSQHWTVK--VGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            P +  SS    T++  + DF LS     T++  ++ +  P W+APEV+ NE   +KSDVY++GVIL+EL +    + N+  M  +  +     R  +P    P + +++  CW  DP CRPSF E+  KL +++
Sbjct: 3136 PNILLSSKDSLTMECHLCDFSLSGFS--TTVANRSVQN-PVWLAPEVINNELCSDKSDVYAYGVILFELLSRTRFFSNITFMSEVEGLITEGVRPSLPSHNLPEYDSLLNICWAQDPTCRPSFIEITKKLEEIE 3266          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_DASNO (Hepatocyte growth factor receptor OS=Dasypus novemcinctus GN=MET PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+    R   ++  CWH   + RPSF ELV ++
Sbjct: 1215 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDRLYEVMLKCWHPKAEMRPSFSELVSRI 1338          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: BTK_CHICK (Tyrosine-protein kinase BTK OS=Gallus gallus GN=BTK PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.917e-14
Identity = 46/121 (38.02%), Postives = 66/121 (54.55%), Query Frame = 3
Query:   45 VKVGDFGLSRLKHETSLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWEL-ATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDL 401
            VKV DFGLSR   +   T+  G   P +W  PEVL       KSDV+SFGV++WE+ +  K+P++  N+ +    V     RL  P+    R  AI+ SCWH   + RP+F  L+  + D+
Sbjct:  533 VKVSDFGLSRYVLDDEYTSSMGSKFPVRWSPPEVLLYSKFSSKSDVWSFGVLMWEVYSLGKMPYERFNNSETTEHV-IQGLRLYRPQQASERVYAIMYSCWHEKAEERPTFSALLGSIVDI 652          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: MET_ORNAN (Hepatocyte growth factor receptor OS=Ornithorhynchus anatinus GN=MET PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 48/125 (38.40%), Postives = 72/125 (57.60%), Query Frame = 3
Query:   33 QHWTVKVGDFGLSRLKHET---SLTTKTGKGTP-QWMAPEVLRNEPSDEKSDVYSFGVILWELATEKI-PWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKL 392
            + +TVKV DFGL+R  ++    S+  KTG   P +WMA E L+ +    KSDV+SFGV+LWEL T    P+ ++N+  +   +    +RL  P+        ++  CWH + + RPSF ELV K+
Sbjct: 1215 EKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTSKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLFEVMLKCWHPNAEMRPSFSELVSKI 1338          
BLAST of EY702992 vs. ExPASy Swiss-Prot
Match: CSK_RAT (Tyrosine-protein kinase CSK OS=Rattus norvegicus GN=Csk PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.504e-14
Identity = 43/126 (34.13%), Postives = 71/126 (56.35%), Query Frame = 3
Query:   30 SQHWTVKVGDFGLSRLKHETSLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWEL-ATEKIPWDNLNSMQVIGAVGFMNQRLEIPKDVDPRWAAIVESCWHSDPQCRPSFQELVDKLRDLQ 404
            S+    KV DFGL++   E S T  TGK   +W APE LR +    KSDV+SFG++LWE+ +  ++P+  +    V+  V     +++ P    P    ++++CWH D   RP+F +L ++L  ++
Sbjct:  323 SEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444          
The following BLAST results are available for this feature:
BLAST of EY702992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
CSK_HUMAN8.605e-1534.92Tyrosine-protein kinase CSK OS=Homo sapiens GN=CSK... [more]
CSK_BOVIN1.124e-1434.92Tyrosine-protein kinase CSK OS=Bos taurus GN=CSK P... [more]
Y1197_DICDI1.468e-1437.29Probable serine/threonine-protein kinase DDB_G0288... [more]
RIPK4_MOUSE1.468e-1435.07Receptor-interacting serine/threonine-protein kina... [more]
INSR_AEDAE1.468e-1436.43Insulin-like receptor OS=Aedes aegypti GN=InR PE=2... [more]
ROCO9_DICDI1.917e-1433.58Probable serine/threonine-protein kinase roco9 OS=... [more]
MET_DASNO1.917e-1438.40Hepatocyte growth factor receptor OS=Dasypus novem... [more]
BTK_CHICK1.917e-1438.02Tyrosine-protein kinase BTK OS=Gallus gallus GN=BT... [more]
MET_ORNAN2.504e-1438.40Hepatocyte growth factor receptor OS=Ornithorhynch... [more]
CSK_RAT2.504e-1434.13Tyrosine-protein kinase CSK OS=Rattus norvegicus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-F02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702992 ID=EY702992; Name=EY702992; organism=Citrus sinensis; type=EST; length=906bp
TCCTCGACCCACGCGTCCGATCTTCTAGTTCCCAACACTGGACTGTCAAG
GTTGGTGATTTTGGTCTGTCACGTCTCAAGCATGAGACATCTCTCACCAC
CAAGACTGGGAAGGGAACTCCTCAATGGATGGCACCGGAAGTTCTCCGAA
ATGAACCCTCCGATGAGAAGTCTGATGTATACAGCTTTGGAGTTATATTA
TGGGAGCTCGCCACTGAGAAGATCCCTTGGGATAATCTCAACTCAATGCA
GGTGATTGGAGCTGTAGGGTTCATGAACCAACGCTTAGAGATCCCAAAAG
ATGTGGATCCACGGTGGGCTGCTATAGTTGAGAGCTGCTGGCACAGTGAT
CCACAGTGCAGGCCATCATTTCAGGAACTGGTGGACAAGCTTCGAGATCT
GCAGAGACAATACTTCCAGGCATCTCGATCAACAGTAGGAGATAGCACCC
AGAAGGAATTGTAGACCATATTCACATTGTTTCCCTGTTCCGTTGCTGAA
ACACACGTCATTGCAAGTAGAAGAATCAGGCATTATTTTTCACAAAAGAT
TTACTTTCTTGGCTGGTAAACAGCTGGTTACAACAGATTTGCCACTCAAA
AGGCTTGAGCTATTGGCCCCGCATAATTCACAGCTACCAGACAATGAAAG
ATAGTAAGAAAAAAAGTTTATAAAGCCAAAGGGTGGGTAGTTGGCATAAT
GTGAGCTGCCTAATTTTGATGGTGATTGCTTTGCCAGTTTGCCTGGCTGG
GAAAGGTTATTTTTTTATATAACTGGTGTGCAAAAATCTTCAGATACTGT
CCGACCGGCTTTGTGTACTGGAACCATGTTTGGCTGAATTACCTTTTTAA
ATAAATAAAAAAAGGCGGCGCGCCCTAAGGATCCAATTTCGTCCCCGGTC
ATGGGA
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