EY702990

Overview
NameEY702990
Unique NameEY702990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length946
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: Y285_STRP1 (Probable ABC transporter ATP-binding protein SPy_0285/M5005_Spy0242 OS=Streptococcus pyogenes serotype M1 GN=SPy_0285 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.551e-14
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 1
Query:  343 QEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            +EILKGVNL +  GE  AIMG NG+GKSTLS  ++G+P+YEVTQG +L+ G N+L ++ +ER+
Sbjct:   16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERA 78          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: Y273_STRP8 (Probable ABC transporter ATP-binding protein spyM18_0273 OS=Streptococcus pyogenes serotype M18 GN=spyM18_0273 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.551e-14
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 1
Query:  343 QEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            +EILKGVNL +  GE  AIMG NG+GKSTLS  ++G+P+YEVTQG +L+ G N+L ++ +ER+
Sbjct:   16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERA 78          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: Y273_STRP6 (Probable ABC transporter ATP-binding protein M6_Spy0273 OS=Streptococcus pyogenes serotype M6 GN=M6_Spy0273 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.551e-14
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 1
Query:  343 QEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            +EILKGVNL +  GE  AIMG NG+GKSTLS  ++G+P+YEVTQG +L+ G N+L ++ +ER+
Sbjct:   16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERA 78          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: Y208_STRP3 (Probable ABC transporter ATP-binding protein SpyM3_0208/SPs0214 OS=Streptococcus pyogenes serotype M3 GN=SpyM3_0208 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.551e-14
Identity = 36/63 (57.14%), Postives = 50/63 (79.37%), Query Frame = 1
Query:  343 QEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            +EILKGVNL +  GE  AIMG NG+GKSTLS  ++G+P+YEVTQG +L+ G N+L ++ +ER+
Sbjct:   16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVDERA 78          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: SUFC_ECOLI (Probable ATP-dependent transporter sufC OS=Escherichia coli (strain K12) GN=sufC PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.853e-13
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 1
Query:  328 IAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            ++   + IL+G++L V+ GE HAIMG NGSGKSTLS  L G  DYEVT G+V  KG +LL + PE+R+
Sbjct:    9 VSVEDKAILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRA 76          
BLAST of EY702990 vs. ExPASy Swiss-Prot
Match: ABCX_CYACA (Probable ATP-dependent transporter ycf16 OS=Cyanidium caldarium GN=ycf16 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.262e-12
Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  286 KSQPLLQVTGLTAVIAESKQEILKGVNLLVNQGEAHAIMGKNGSGKSTLSKVLVGHPDYEVTQGSVLIKGDNLLQMDPEERS 531
            K   +L +  L A + E   E+L  +NL +   E H IMG NGSGKS+L KV+ GHP Y+V +G + ++  ++ Q  PEERS
Sbjct:    2 KETSVLTIQNLKACVNEF--EVLHNINLQIKTNETHVIMGPNGSGKSSLLKVIAGHPSYKVIEGKIFVENIDITQATPEERS 81          
The following BLAST results are available for this feature:
BLAST of EY702990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
Y285_STRP14.551e-1457.14Probable ABC transporter ATP-binding protein SPy_0... [more]
Y273_STRP84.551e-1457.14Probable ABC transporter ATP-binding protein spyM1... [more]
Y273_STRP64.551e-1457.14Probable ABC transporter ATP-binding protein M6_Sp... [more]
Y208_STRP34.551e-1457.14Probable ABC transporter ATP-binding protein SpyM3... [more]
SUFC_ECOLI3.853e-1354.41Probable ATP-dependent transporter sufC OS=Escheri... [more]
ABCX_CYACA3.262e-1242.68Probable ATP-dependent transporter ycf16 OS=Cyanid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-E12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702990 ID=EY702990; Name=EY702990; organism=Citrus sinensis; type=EST; length=946bp
CTCCTTTCAATGGTACCCTGCATGTCCGGGCCGGAATTCCTCAAAAAAGC
AGNCGTCCGGCCTAACGTCACCACTAAGATGGCTGCATTTCTACCCAGCA
CCTCTTGTTGTTCATTCAAATTCTCAAACCCACCCTCTAAATCTCACGTG
TTTACTCTTCCCGCCCTTCCCCTTCTCTGTCGCCGGTCAAACTACCATCG
TCACCATCTATCTCTCAACCGCGTAACAGCCGCCCTCTCCGCCGTCGATT
CCCCTTTGAAATCTTCCTCCGAGGGTCAGGATGAGAAAAGCCAGCCTCTG
CTTCAAGTCACAGGCTTAACGGCCGTGATCGCAGAGTCCAAGCAGGAAAT
TCTCAAGGGCGTCAATCTCTTGGTCAACCAAGGAGAGGCTCATGCGATCA
TGGGAAAGAACGGTTCTGGGAAGAGCACTCTTTCAAAGGTTCTGGTTGGG
CATCCGGATTATGAAGTGACACAAGGGAGTGTCCTGATTAAAGGTGATAA
TCTTCTACAAATGGACCCAGAAGAACGCTCGCTTGCCTGTACATATTTTG
AGTCTCCATTCACCACTTCGAACCCCCGAAGTCCACATCACTCCACTTAC
TTCACATGGCCTTATAGTGCTCGTGGAAAAAAACTGCGTCAACTCTGAAA
CTGCACCATTTTGCTTTTCATCGCTACCTTTACCCTTCACCTCAAACCGG
TCGAGCCTTAGAGACTGACTATTGNTAAGTGAAGGTGTGTATGCAGGCGG
TGTGCGTTACGGTGAATCGTAACCCTACCCTAACTACTCCACCCCACCAG
TATGATCGCAAATACACTTCCCCCTCATAGCCAGCAACACCCCACCTATG
CGATCGCTACTTTCACCTCCTTGCTCCCACCTCGTATAACCCCCTCAACC
GCCTTTATGGACCCCACACAAATCATTCACACTACACACAACAAGC
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