EY702982

Overview
NameEY702982
Unique NameEY702982
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1594 contig Csv1_Contig1594:291..1170. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702982 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 71/293 (24.23%), Postives = 132/293 (45.05%), Query Frame = 3
Query:    6 RPGKMSLVVASSAKMFKELMKENDLAISQRPVPYVARVLEDAGRDIAFVPYGDYWRQIRKISRMELFSVKKVQSLHYIREDQSSKLVESIRGH---AGTVMNLSKAVSDYTSTVVARAAFGSGCKDQDKFIRLSLEMVAAAGAVSTLPDMFPAL--GFIPILSG-KKAFLKSIQTEADKILDVIIDEHIQKTK--SNEYDGKESDKEDIVDVLLRLEKSGELEIP--------ITTQDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIRESSGGE-RIYESD 833
            R G+ +LVV SS +M KE++    +    R    V  +    G+D+ F  Y ++WR++R+I  +  F+ K VQ   +  ED+++++VE ++     A T + L + +       + R  F    +  D    L  ++ A  G  S L   F      FIPIL    + +LK ++   ++ L +  D  +++ K  ++     E + +  +D +L  ++ GE+           I    I+  +WS+  G              EL+ +P + +K++AEI    G + +I E D
Sbjct:   72 RMGQRNLVVVSSPEMAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYSEHWRKMRRIMTVPFFTNKVVQQQRFNWEDEAARVVEDVKKDPQAATTGIVLRRRLQLLMYNNMYRIMFDRRFESVDD--PLFNKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKLVKEVKERRLKLFKDYFVEERKKLTSTKSMTEENFKCAIDHVLDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWG------------IAELVNHPDIQKKLRAEIDRVLGPDHQITEPD 350          
BLAST of EY702982 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 70/299 (23.41%), Postives = 134/299 (44.82%), Query Frame = 3
Query:    6 RPGKMSLVVASSAKMFKELMKENDLAISQRPVPYVARVLEDAGRDIAFVPYGDYWRQIRKISRMELFSVKKVQSLHYIREDQSSKLVESIRGHAGTVMN---LSKAVSDYTSTVVARAAFGSGCKDQDKFIRLSLEMVAAAGAVSTLPDMFPAL--GFIPILSG-KKAFLKSIQTEADKIL----DVIIDEH--IQKTKSNEYDGKESDKEDIVDVLLRLEKSGELEIP--------ITTQDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIRESSG-GERIYESDIQ 839
            R  + +LVV SS ++ KE++    +    R    V  +    G+DI F  YG++WR++R+I  +  F+ K VQ   +  E +++ +V+ ++ ++   +N   + + +      ++ R  F    + ++    L +++ A  G  S L   F      FIPIL    K +LK  +   D+ L    D  +DE   +  TKS   +G +      +D +L  +K GE+           I    I+  +WS+  G              EL+ + ++  K++ E+ +  G G ++ E D++
Sbjct:   72 RMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEED--PLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTYNEGLKC----AIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWG------------IAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLE 352          
BLAST of EY702982 vs. ExPASy Swiss-Prot
Match: CP17A_ONCMY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorhynchus mykiss GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 67/283 (23.67%), Postives = 122/283 (43.11%), Query Frame = 3
Query:   12 GKMSLVVASSAKMFKELMKENDLAISQRPVPYVARVLEDAGRDIAFVPYGDYWRQIRKISRMELFSV-KKVQSLHYIREDQSSKLVESIRGHAGTVMNLSKAVSDYTSTVVARAAFGSG-CKDQDKF---IRLSLEMVAAAGAVSTLPDMFPALGFIPILSGKKAFLKSIQTEADKILDVIIDEHIQKTKSNEYDGKESDKEDIVDVLLRLEKSGE----LEIPITT-----QDIKAVIWSVFAGGXXXXXXXXXXXXXELMRNPKVMEKVQAEIRESSGGER 818
            G  ++++ +  +  KE++ +     + RP      +L   G+DIAF  YG  WR  RK     L    +   S+  I   ++  L +++R      ++LS  ++   + VV    F S  C+   +F   ++ S  +V    A  +L D+FP L   P  +     LK   +  DK+L    +EH       + D  + ++ D++D LLR ++S E     EI + T       +   +  +F  G              L+ +P+V +++Q E+    GG+R
Sbjct:   75 GPHTVILVNHHQHAKEVLLKKGKIFAGRPRTVTTDLLTRDGKDIAFADYGATWRFHRKTVHGALCMFGEGSASIEKIICREALSLCDTLRESGSASLDLSPELTRAVTNVVCSLCFSSSYCRGDPEFEAMLQFSQGIVDTV-AKDSLVDIFPWLQVFP--NADLRLLKQCVSIRDKLLQKKYEEH-------KSDYSDHEQRDLLDALLRAKRSAENNNTAEITMETVGLSEDHLLMTVGDIFGAGVETTSTVLKWAIAYLIHHPQVQQRIQEELDSVVGGDR 347          
The following BLAST results are available for this feature:
BLAST of EY702982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
TCMO_RUTGR7.171e-1124.23Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_PEA7.171e-1123.41Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
CP17A_ONCMY9.366e-1123.67Steroid 17-alpha-hydroxylase/17,20 lyase OS=Oncorh... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-E04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702982 ID=EY702982; Name=EY702982; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGGGGAAAATGTCCCTAGTCGTCGCGTCGTCAGCTAAAATG
TTTAAAGAGCTGATGAAGGAGAATGATCTAGCCATTTCGCAAAGGCCAGT
GCCATACGTTGCCAGAGTCCTGGAAGATGCTGGAAGAGACATTGCCTTTG
TTCCCTATGGTGATTACTGGAGACAAATTCGGAAAATAAGCAGAATGGAG
CTGTTCAGTGTCAAGAAAGTCCAGTCATTGCATTATATTCGTGAAGATCA
ATCCAGCAAGCTTGTTGAATCCATTAGGGGTCATGCAGGAACAGTAATGA
ATCTGAGCAAAGCAGTATCCGACTACACGAGTACTGTTGTTGCAAGAGCA
GCTTTTGGTAGCGGATGTAAAGACCAAGATAAGTTTATAAGGCTATCCCT
AGAAATGGTTGCGGCAGCAGGAGCCGTCAGTACTTTGCCAGATATGTTTC
CTGCTCTAGGGTTTATTCCTATACTCAGCGGGAAGAAAGCCTTTTTGAAG
AGCATTCAAACGGAAGCTGACAAGATCCTCGACGTCATTATTGATGAGCA
TATTCAGAAAACCAAGAGCAATGAATATGACGGAAAGGAATCAGACAAGG
AAGACATAGTTGATGTTCTCCTAAGACTTGAGAAATCTGGCGAACTTGAA
ATCCCTATTACTACCCAAGACATCAAAGCTGTCATCTGGAGTGTATTTGC
TGGTGGAACGGACACTTCATCAACTACAACATTATGGACTATGTCGGAGT
TGATGAGAAATCCTAAAGTGATGGAGAAGGTACAAGCTGAGATAAGAGAA
AGCTCAGGGGGAGAAAGAATCTATGAGTCAGATATTCAGGATTTCACTAT
ATGAGGGCAGTCATCAAGAAGCTCCTAGAC
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