EY702980
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.833e-54 Identity = 112/207 (54.11%), Postives = 134/207 (64.73%), Query Frame = 3 Query: 60 ATSAIQQSAFAGQTA-LRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 AT A+ S+FAG+ + S+E R G++TMR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIH RW MLGALGCVFPE+ ++NG KFGE VWFKAG+QIF +GGLDYLGNP+ ++ Q+ L G + P G F+P GL + P Sbjct: 4 ATMALSSSSFAGKAVNVPSSSEITRN------GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDP 204
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 5.006e-54 Identity = 115/206 (55.83%), Postives = 135/206 (65.53%), Query Frame = 3 Query: 60 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 AT A+ +FAG+ A++ S G G+ TMR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NG KFGE VWFKAG+QIFS+GGLDYLGNP+ ++ Q+ L G + P G F+P GL + P Sbjct: 4 ATMALSSPSFAGK-AVKFSPSSSEITG---NGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDP 205
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.539e-54 Identity = 107/176 (60.80%), Postives = 125/176 (71.02%), Query Frame = 3 Query: 153 GRITMRRTVKSAPQSI-----WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 GRITMR+T P+++ WYGPDR KYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NG KFGE VWFKAG+QIFS+GGLDYLGNP+ ++ Q+ L G + P G F+P GL + P Sbjct: 31 GRITMRKTA-GKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDP 205
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.539e-54 Identity = 119/212 (56.13%), Postives = 140/212 (66.04%), Query Frame = 3 Query: 57 MATSAI-QQSAFAGQ--TALRQSNEFVRKVGVADG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG-LSKDXXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 MA+ I + AFAG ++++ N + VG A G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG KFGE VWFKAGAQIFS+GGLDYLG+P ++ Q+ L G + P G F+P GL + P Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDP 216
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.539e-54 Identity = 113/207 (54.59%), Postives = 133/207 (64.25%), Query Frame = 3 Query: 60 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG-LSKDXXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 +T A+ +AFAG+ S+ F R+TMR+T A S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG KFGE VWFKAG+QIFS+GGLDYLGNP+ ++ Q+ L G + P G F+P GL + P Sbjct: 4 STMALSSTAFAGKAVNVPSSLFGE-------ARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDP 203
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 6.539e-54 Identity = 114/206 (55.34%), Postives = 134/206 (65.05%), Query Frame = 3 Query: 60 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG-LSKDXXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 +T A+ +FAG A++ S G G+ MR+TV A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NG KFGE VWFKAG+QIFS+GGLDYLGNP+ ++ Q+ L G + P G F+P GL + P Sbjct: 4 STMALSSPSFAGN-AVKLSPSSSEITG---NGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDP 205
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.540e-54 Identity = 119/212 (56.13%), Postives = 140/212 (66.04%), Query Frame = 3 Query: 57 MATSAI-QQSAFAGQ--TALRQSNEFVRKVGVADG-GRITMRRTV--KSAPQSI---WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWG-LSKDXXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 MA+ I + AFAG ++++ N + VG A G R+TMR+ KS SI WYGPDR YLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+L++NG KFGE VWFKAGAQIFS+GGLDYLG+P ++ Q+ L G + P G F+P GL + P Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDP 216
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.540e-54 Identity = 121/241 (50.21%), Postives = 143/241 (59.34%), Query Frame = 3 Query: 60 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP--IICLN*REGAQKRLHG*SSMF*LFH*VLLLGRG 761 AT A+ S FAG+ + + G+ TMR+T A S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+ ++NG KFGE VW KAG+QIFS+GGLDYLGNP+ ++ Q+ L G + P G F+P GL P L +E RL SMF F ++ G+G Sbjct: 4 ATMALSSSTFAGKVVKLSPSSSE----ITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKVKETKNGRL-AMFSMFGFFIQAIVTGKG 239
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.115e-53 Identity = 112/207 (54.11%), Postives = 132/207 (63.77%), Query Frame = 3 Query: 60 ATSAIQQSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQ-----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 +T A+ +AFAG+ S+ F R+TMR+T A S WYGPDR YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L++NG KFGE VWFKAG+QIFS+GGLDYLGNP+ ++ Q+ L G + P G F+P GL + P Sbjct: 4 STMALSSTAFAGKAVNVPSSSFGE-------ARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDP 203
BLAST of EY702980 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.115e-53 Identity = 106/177 (59.89%), Postives = 122/177 (68.93%), Query Frame = 3 Query: 141 VADGGRITMRRTVKSAPQS--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGAKFGEPVWFKAGAQIFSKGGLDYLGNPNSFMLRTFWLSGPAQLCLWGLSKD-XXXXXXXXXXXXPT*TGRCFEPPGLVNYP 662 + + TMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LS+NG KFGE VWFKAG+QIFS+GGLDYLGNP+ ++ Q+ L G + P G F+P GL + P Sbjct: 17 IQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDP 193 The following BLAST results are available for this feature:
BLAST of EY702980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EY702980 ID=EY702980; Name=EY702980; organism=Citrus sinensis; type=EST; length=856bpback to top |