EY702974

Overview
NameEY702974
Unique NameEY702974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6040 contig Csv1_Contig6040:2..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_CAEEL (Nascent polypeptide-associated complex subunit alpha OS=Caenorhabditis elegans GN=Y65B4BR.5 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.386e-32
Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = 3
Query:  273 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            KLG+K + GVSRV ++KSKNILFVI+KPDVFKSP +DTY+IFGEAKIEDL+   Q  A E  K    +  +   E       + + D TG+E KDIELV++QA  +R KA++ALK AD DIV+AIM LT
Sbjct:   68 KLGLKQVTGVSRVCIRKSKNILFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLKPTREAPQLKTVEEDENEDVEFKEDSTGIEEKDIELVISQANTTRNKAIRALKEADNDIVNAIMSLT 196          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_PHANO (Nascent polypeptide-associated complex subunit alpha OS=Phaeosphaeria nodorum GN=EGD2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.035e-32
Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQF-KAPDLSHVVS---------------------KPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KLG+K I G++RVT+++ KNILFVI++PDV+KSP+++T++IFGEAKIEDL+SQ Q  AA+Q  +A   SH  S                     + +     +DDEEVD++G+E KDIELVM QA VSR KAVKALK  D DIV++IM L+
Sbjct:   57 AIAKLGLKHIDGITRVTLRRPKNILFVINQPDVYKSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAQAEAASHDHSGHDHDHDHKGKGKAVEDKKDDEEDEEEEEEDDEEVDDSGLEAKDIELVMQQASVSRKKAVKALKENDNDIVNSIMALS 210          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_ASPTN (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=egd2 PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.035e-32
Identity = 75/147 (51.02%), Postives = 104/147 (70.75%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKA------------PDLSHVVSKPES---SAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KLG+K +PG++RVT ++ KNILFVI++P+V++SP+++T++IFGEAKIEDL++Q Q  AA+Q  A             D+     +PE+    A   D EEVDE+G+E KDIELVM QA VSR KAVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKLVPGITRVTFRRPKNILFVINQPEVYRSPSSNTWIIFGEAKIEDLNAQAQASAAQQLAAQEAAQEHAGHEHEDILGKAKEPEAEKKEAEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_ASPNC (Nascent polypeptide-associated complex subunit alpha OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=egd2 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31
Identity = 76/147 (51.70%), Postives = 104/147 (70.75%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQF--------KAPDLSHVVSK---PESSAMAQ----DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KLG+K +PG++RVT+++ KNILFVI++PDV++SP+++T++IFGEAKIEDL++  Q  AA+Q            D  H   K   PE+ A  +    D EEVDE+G+E KDIELVM QA VSR KAVKAL+  D DIV++IM L+
Sbjct:   55 AIGKLGLKHVPGITRVTLRRPKNILFVINQPDVYRSPSSNTWIIFGEAKIEDLNATAQATAAQQLAEAAANEHAGHDHEHDHGKGKAPEAEAKKEEEEDDGEEVDESGLEAKDIELVMAQANVSRKKAVKALRENDNDIVNSIMALS 201          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_AJECN (Nascent polypeptide-associated complex subunit alpha OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=EGD2 PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.955e-31
Identity = 75/151 (49.67%), Postives = 104/151 (68.87%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLS--------------HVVSKPESSAMAQDDEEVDE-----TGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KLG+K +PG++RVT+++ K ILFVI++PDV++SP+++T++IFGEAKIEDL+SQ Q  AA+Q  A + +              H   K   SA  +D+EE DE     +G+E KDIELVM QA VSR KA+KALK  D DIV++IM L+
Sbjct:   57 AIGKLGLKHVPGITRVTLRRPKGILFVINQPDVYRSPSSNTWIIFGEAKIEDLNSQAQASAAQQLAAAEAAGSNEHAGHDHASHDHGKGKAVESADKKDEEEDDEEVFDASGLEAKDIELVMAQASVSRNKAIKALKENDNDIVNSIMALS 207          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_NEUCR (Nascent polypeptide-associated complex subunit alpha OS=Neurospora crassa GN=egd-2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.016e-30
Identity = 69/142 (48.59%), Postives = 96/142 (67.61%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDLSH----------VVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KL ++ +PG++RVT+++ KNILFVI+ P+V+KSP ++TY++FGEAKIEDL++  Q  AA+Q  +    H             K +      + EEVD  G+E KDIELVMTQA VSR KA+KALK  D DIV++IM L+
Sbjct:   58 AIEKLHLQRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLASQSAEHDHAGHTHEHEEAGKAKEEEEEDEGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_CHAGB (Nascent polypeptide-associated complex subunit alpha OS=Chaetomium globosum GN=EGD2 PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.733e-30
Identity = 72/143 (50.35%), Postives = 96/143 (67.13%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQF-----------KAPDLSHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KL +  +PG++RVT+++ KNILFVI+ P+V+KSP ++TY++FGEAKIEDL++  Q  AA+Q               D  H  +K E      D EEVD  G+E KDIELVMTQA VSR KA+KALK  D DIV++IM L+
Sbjct:   58 AIEKLHLTRVPGITRVTLRRPKNILFVINNPEVYKSPNSNTYIVFGEAKIEDLNASAQAAAAQQLANQTAEHDHAGHTHDHKHEAAKEEEEE-EDDGEEVDAEGIEDKDIELVMTQANVSRKKAIKALKENDNDIVNSIMALS 199          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_MAGGR (Nascent polypeptide-associated complex subunit alpha OS=Magnaporthe grisea GN=EGD2 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.599e-30
Identity = 73/144 (50.69%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAP---DLSHV------VSKPESSAMAQ---DDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KL +  + G++RVT+++ KNILFVI+ P+V+KSP + TY++FGEAKIEDL++  Q  AA+Q  +    D  H           E  A  +   DDEEVD  G+E KDIELVMTQAGVSR KA+KALK  D DIV++IM L+
Sbjct:   57 AIEKLHLIRVDGITRVTLRRPKNILFVINNPEVYKSPNSGTYIVFGEAKIEDLNASAQAAAAQQLASSAGHDHDHAGHSHGEAKASEGDAKKEEEDDDEEVDADGIEDKDIELVMTQAGVSRTKAIKALKENDNDIVNSIMALS 200          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_GIBZE (Nascent polypeptide-associated complex subunit alpha OS=Gibberella zeae GN=EGD2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.508e-29
Identity = 71/151 (47.02%), Postives = 100/151 (66.23%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKAPDL----SHVVSKPESSAMA---------------QDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            A+ KL +  IPG++RVT+++ KNILFVI+ P+V+KSP ++TY++FGEAKIED+++  Q  AA Q  + +      H   +P  +  A               +++EEVD +G+E KDIELVMTQA VSR KAVKALK  D DIV++IM L+
Sbjct:   58 ALEKLHLTRIPGITRVTLRRPKNILFVINTPEVYKSPNSNTYIVFGEAKIEDVNAAAQQAAAAQLASQNAEDHSGHNHGEPSKAVEADEKKEDKEDDEDEEEEEEEEVDASGLEDKDIELVMTQANVSRNKAVKALKENDNDIVNSIMALS 208          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_PICGU (Nascent polypeptide-associated complex subunit alpha OS=Pichia guilliermondii GN=EGD2 PE=3 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.417e-26
Identity = 65/148 (43.92%), Postives = 95/148 (64.19%), Query Frame = 3
Query:  273 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFK-------APDLSHVVSKPES------------SAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            KL +KP+PG++RVT K+  N+++ I +PDVFKS    TYV+FGEAK++D++ ++    A+Q +       A D       PES              + +D+ EVDETG++ KDIE+++ Q  VSRAKAVKAL+A  GD+V+AIMEL+
Sbjct:   32 KLHLKPVPGITRVTFKQKGNLIYAIEQPDVFKS-AAGTYVVFGEAKVDDMNKRIAEAQAQQEQQEALTKAAADAETADKSPESITNDLQNASLEDKTVEEDEGEVDETGLDSKDIEIIVEQTQVSRAKAVKALRAHKGDMVNAIMELS 178          
The following BLAST results are available for this feature:
BLAST of EY702974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_CAEEL5.386e-3255.81Nascent polypeptide-associated complex subunit alp... [more]
NACA_PHANO7.035e-3250.65Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPTN7.035e-3251.02Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASPNC3.491e-3151.70Nascent polypeptide-associated complex subunit alp... [more]
NACA_AJECN5.955e-3149.67Nascent polypeptide-associated complex subunit alp... [more]
NACA_NEUCR1.016e-3048.59Nascent polypeptide-associated complex subunit alp... [more]
NACA_CHAGB1.733e-3050.35Nascent polypeptide-associated complex subunit alp... [more]
NACA_MAGGR8.599e-3050.69Nascent polypeptide-associated complex subunit alp... [more]
NACA_GIBZE9.508e-2947.02Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICGU4.417e-2643.92Nascent polypeptide-associated complex subunit alp... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702974 ID=EY702974; Name=EY702974; organism=Citrus sinensis; type=EST; length=856bp
CACGCGTCCGGTCTTGAGGAATTTGCCTCTGTTTATCCCCAAGAACAGCC
ATGACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTCGAACAGCA
AAAAATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGATGAAGACG
AGGATGAGGATGAAGATGATGAGAAAGACGAAGATGAAGCTGACGAGGGA
CACCGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGAAGTGAAAA
GAAGAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTATCCCTGGTG
TTAGCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTGTTATCTCA
AAACCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTAATCTTTGG
TGAGGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCAGGCAGCAG
AGCAATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAACCTGAGTCA
TCAGCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGGGTTGAGCC
TAAGGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAGGGCAAAGG
CTGTGAAAGCGCTGAAGGCTGCAGATGGGGACATAGTTTCAGCTATCATG
GAGCTTACCAACTGAGAGTTTTCTTAGATGTTTGTGGTGATTTAGTAAAC
CTTCTATAATTTTCCAGTCCATGTGTCCTTTAATCTCTCTTTTTTTTTCC
CCTGCCTTTTGNGATATTTCCTTTTCCTTTGTGGATATCAATTCACCGTG
GCTGCNATCTTTGATGATAAATGGAGTCTAGTTTTTTCCTGGAAAAAAAA
AAAAAA
back to top