EY702974

Overview
NameEY702974
Unique NameEY702974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6040 contig Csv1_Contig6040:2..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_YARLI (Nascent polypeptide-associated complex subunit alpha OS=Yarrowia lipolytica GN=EGD2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.621e-20
Identity = 56/158 (35.44%), Postives = 94/158 (59.49%), Query Frame = 3
Query:  273 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDL----------SSQLQTQAAE---------------QFKAPDLSHVVSKPESSAM-----AQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMEL 656
            KL ++ + G++RV +K+++  +FVI+ P+V+K+PT ++YV+FGEA+ ED+          ++Q Q  AAE               +  + D + + +  E++++     A+D+ E D TG+E  DI+LVM QA VSR KA+  LK  D D+V+ IM+L
Sbjct:   39 KLNLQKVEGITRVVLKRTRQHIFVIANPEVYKTPTGNSYVVFGEAQHEDMQATARAAQIAAAQAQQAAAETGSVSEAAAAGEVGAELASKDPASITADLEAASLSKDEDAEDEAEADATGLEDSDIKLVMEQANVSRNKAINGLKKNDSDVVNTIMDL 196          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_VANPO (Nascent polypeptide-associated complex subunit alpha OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.376e-19
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 3
Query:  273 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---------------QTQAAEQFKAPDLSHVVSKPESSAMAQDDEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            KLG+K I G++RVT +K  N +F I  P+V++S   + YV+FGEAKI++ S +L               + Q   Q  A       +KP ++A   D+  VD   +  +DIELV +QA VS+ KA+KALK  +GDIV+AIM L+
Sbjct:   26 KLGLKKIAGINRVTFRKKDNQIFAIDNPEVYRSQGGN-YVVFGEAKIDNFSQKLAAAQEKIQSVSKSPEEIQKDMQLAADQAGDESAKPAAAAEEDDEAPVDAGDLSAEDIELVASQANVSKNKAIKALKEHNGDIVNAIMALS 168          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_YEAST (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae GN=EGD2 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19
Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 3
Query:  273 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSK-PE--------------SSAMAQDDEE--VDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     YV+FGEAK+++ + +L   Q QA      P    V +K PE              ++A  +DDEE  VD   +   DIELV+ Q  VS+ +A+KALKA +GD+V+AIM L+
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_YEAS7 (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.066e-19
Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 3
Query:  273 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSK-PE--------------SSAMAQDDEE--VDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            KLG+K IPG+ RVT +K  N ++ I KP+VF+S     YV+FGEAK+++ + +L   Q QA      P    V +K PE              ++A  +DDEE  VD   +   DIELV+ Q  VS+ +A+KALKA +GD+V+AIM L+
Sbjct:   26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_CRYNE (Nascent polypeptide-associated complex subunit alpha OS=Cryptococcus neoformans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.004e-19
Identity = 55/158 (34.81%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  264 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQLQTQAAEQFKA----------------------PDLSHVVSKPESSAMAQDDEEVDETG-----VEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMEL 656
            A+  LG+K + G+ RVT+++++N+L V+S P+V+KSP +D Y++FGEAK+ED +S  Q QA  Q  A                       +L       +SSA A   E  D +      V  ++I+L++ Q GV  AKA +A  +  GD+++AIM+L
Sbjct:   33 ALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVEDPNSAAQLQAQAQLAASSQAAQQAHAHGGFKEGVPKSLEELMQDAPSTDSSAPAPSGEATDASASGDFKVSDEEIQLIVAQTGVDEAKAREAYISEKGDLINAIMKL 190          
BLAST of EY702974 vs. ExPASy Swiss-Prot
Match: NACA_CANGA (Nascent polypeptide-associated complex subunit alpha OS=Candida glabrata GN=EGD2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.165e-18
Identity = 53/140 (37.86%), Postives = 85/140 (60.71%), Query Frame = 3
Query:  273 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTTDTYVIFGEAKIEDLSSQL---QTQAAEQFKAPDLSHVVSKPESSAMAQD--------DEEVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 659
            KLG+K +PG+ RVT +K  N +F I KP+VF+S     YV+FGEAK+++ + +L   Q QA  Q        + +  +++A+A +        +E+VD   +   DI+LV+ Q   ++ +A+KALK  +GDIV+AIM L+
Sbjct:   26 KLGLKKVPGIIRVTFRKKDNQIFAIEKPEVFRS-VGGNYVVFGEAKVDNFTQRLAAAQQQAQSQTATKTPEDIQADMQAAAVANENKTEGDAAEEDVDAGDLSNDDIDLVVQQTNATKGQAIKALKEHNGDIVNAIMSLS 164          
The following BLAST results are available for this feature:
BLAST of EY702974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_YARLI3.621e-2035.44Nascent polypeptide-associated complex subunit alp... [more]
NACA_VANPO1.376e-1940.28Nascent polypeptide-associated complex subunit alp... [more]
NACA_YEAST3.066e-1941.61Nascent polypeptide-associated complex subunit alp... [more]
NACA_YEAS73.066e-1941.61Nascent polypeptide-associated complex subunit alp... [more]
NACA_CRYNE4.004e-1934.81Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANGA1.165e-1837.86Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-D07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702974 ID=EY702974; Name=EY702974; organism=Citrus sinensis; type=EST; length=856bp
CACGCGTCCGGTCTTGAGGAATTTGCCTCTGTTTATCCCCAAGAACAGCC
ATGACTGCTCAGACCCAAGAAGAGCTTCTCGCCTCTCTTCTCGAACAGCA
AAAAATCGATGATGATAAGCCTGTTGTAGAAGATGATGAAGATGAAGACG
AGGATGAGGATGAAGATGATGAGAAAGACGAAGATGAAGCTGACGAGGGA
CACCGAGATGGAGAGGCAGGTGGTAGGTCAAAACAGAGCAGAAGTGAAAA
GAAGAGTCGCAAAGCAATGTTAAAGCTTGGAATGAAACCTATCCCTGGTG
TTAGCCGGGTTACCGTCAAAAAGAGCAAGAATATCTTGTTTGTTATCTCA
AAACCGGATGTTTTCAAGAGCCCGACAACAGATACATATGTAATCTTTGG
TGAGGCAAAGATCGAGGACTTGAGCTCACAATTGCAGACTCAGGCAGCAG
AGCAATTTAAGGCTCCTGATCTCAGCCACGTGGTCTCCAAACCTGAGTCA
TCAGCCATGGCTCAGGACGATGAAGAAGTAGATGAGACCGGGGTTGAGCC
TAAGGACATAGAGTTAGTAATGACACAGGCAGGAGTCTCCAGGGCAAAGG
CTGTGAAAGCGCTGAAGGCTGCAGATGGGGACATAGTTTCAGCTATCATG
GAGCTTACCAACTGAGAGTTTTCTTAGATGTTTGTGGTGATTTAGTAAAC
CTTCTATAATTTTCCAGTCCATGTGTCCTTTAATCTCTCTTTTTTTTTCC
CCTGCCTTTTGNGATATTTCCTTTTCCTTTGTGGATATCAATTCACCGTG
GCTGCNATCTTTGATGATAAATGGAGTCTAGTTTTTTCCTGGAAAAAAAA
AAAAAA
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