EY650293

Overview
NameEY650293
Unique NameEY650293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.451e-44
Identity = 67/111 (60.36%), Postives = 88/111 (79.28%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENLPP++I+++ KE+ +L   PPEGIK+  N++D + +  +IEGP GTPY  G+FRMKL+L  DFP +PPKGYFLTKIFHPN++ NGEICVN LKKDW   LG+RHVL+ +
Sbjct:    6 ENLPPHIIRRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTI 116

HSP 2 Score: 41.9726 bits (97), Expect = 6.451e-44
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLEN 744
            +CLLI P PESALNE+AG++LLEN
Sbjct:  117 KCLLIHPNPESALNEEAGRLLLEN 140
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.407e-44
Identity = 69/111 (62.16%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GPAGTPY  G+FR+KL LS DFP +PPK YFLTKIFHPN+A NGEICVNTLKKDW P LG++H+L+ +
Sbjct:    9 ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTI 119

HSP 2 Score: 41.2022 bits (95), Expect = 8.407e-44
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLE 741
            +CLLI P PESALNE+AGKMLLE
Sbjct:  120 KCLLIVPNPESALNEEAGKMLLE 142
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.407e-44
Identity = 69/111 (62.16%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GPAGTPY  G+FR+KL LS DFP +PPK YFLTKIFHPN+A NGEICVNTLKKDW P LG++H+L+ +
Sbjct:    9 ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTI 119

HSP 2 Score: 41.2022 bits (95), Expect = 8.407e-44
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLE 741
            +CLLI P PESALNE+AGKMLLE
Sbjct:  120 KCLLIVPNPESALNEEAGKMLLE 142
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_DROAN (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae GN=GF21161 PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 8.407e-44
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GPAGTPY  G+FR+KL L+ DFP +PPK YFLTKIFHPN+A NGEICVNTLKKDW P LG++H+L+ +
Sbjct:    9 ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTI 119

HSP 2 Score: 41.2022 bits (95), Expect = 8.407e-44
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLE 741
            +CLLI P PESALNE+AGKMLLE
Sbjct:  120 KCLLIVPNPESALNEEAGKMLLE 142
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.096e-43
Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENLPP++I+++ KE+ +L   PPEGIK+  N++D + +   IEGP GTPY  G+FRMKL+L  DFP +PPKGYFLTKIFHPN++ NGEICVN LKKDW   LG+RHVL+ +
Sbjct:    6 ENLPPHIIRRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTI 116

HSP 2 Score: 41.9726 bits (97), Expect = 1.096e-43
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLEN 744
            +CLLI P PESALNE+AG++LLEN
Sbjct:  117 KCLLIHPNPESALNEEAGRLLLEN 140
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.861e-43
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GPAGTPY  G+FR+KL L+ DFP +PPK YFLTKIFHPN+A NGEICVNTLKKDW P LG++H+L+ +
Sbjct:    9 ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTI 119

HSP 2 Score: 41.2022 bits (95), Expect = 1.861e-43
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLE 741
            +CLLI P PESALNE+AGKMLLE
Sbjct:  120 KCLLIVPNPESALNEEAGKMLLE 142
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.861e-43
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GPAGTPY  G+FR+KL L+ DFP +PPK YFLTKIFHPN+A NGEICVNTLKKDW P LG++H+L+ +
Sbjct:    9 ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTI 119

HSP 2 Score: 41.2022 bits (95), Expect = 1.861e-43
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLE 741
            +CLLI P PESALNE+AGKMLLE
Sbjct:  120 KCLLIVPNPESALNEEAGKMLLE 142
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.861e-43
Identity = 68/111 (61.26%), Postives = 89/111 (80.18%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENL P  I+Q+ +EL+ ++ +PPEGIKV +N+ D + I A I+GPAGTPY  G+FR+KL L+ DFP +PPK YFLTKIFHPN+A NGEICVNTLKKDW P LG++H+L+ +
Sbjct:    9 ENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTI 119

HSP 2 Score: 41.2022 bits (95), Expect = 1.861e-43
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLE 741
            +CLLI P PESALNE+AGKMLLE
Sbjct:  120 KCLLIVPNPESALNEEAGKMLLE 142
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 5.360e-43
Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENLPP++I+ + KE+ +L   PP+GIKV  N++D + +   IEGP GTPY  G+FRMKLLL  DFP SPPKGYFLTKIFHPN+  NGEICVN LK+DW   LG+RHVL+ +
Sbjct:    6 ENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTI 116

HSP 2 Score: 41.9726 bits (97), Expect = 5.360e-43
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLEN 744
            +CLLI P PESALNE+AG++LLEN
Sbjct:  117 KCLLIHPNPESALNEEAGRLLLEN 140
[Close]
BLAST of EY650293 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.360e-43
Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = 3 
Query:  339 ENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVV 671
            ENLPP++I+ + KE+ +L   PP+GIKV  N++D + +   IEGP GTPY  G+FRMKLLL  DFP SPPKGYFLTKIFHPN+  NGEICVN LK+DW   LG+RHVL+ +
Sbjct:    6 ENLPPHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTI 116

HSP 2 Score: 41.9726 bits (97), Expect = 5.360e-43
Identity = 18/24 (75.00%), Postives = 22/24 (91.67%), Query Frame = 1 
Query:  673 RCLLIEPFPESALNEQAGKMLLEN 744
            +CLLI P PESALNE+AG++LLEN
Sbjct:  117 KCLLIHPNPESALNEEAGRLLLEN 140
The following BLAST results are available for this feature:
BLAST of EY650293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 168
Match NameE-valueIdentityDescription
UB2SB_XENLA6.451e-4460.36Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus lae... [more]
UBE2S_DROPS8.407e-4462.16Ubiquitin-conjugating enzyme E2 S OS=Drosophila ps... [more]
UBE2S_DROPE8.407e-4462.16Ubiquitin-conjugating enzyme E2 S OS=Drosophila pe... [more]
UBE2S_DROAN8.407e-4461.26Ubiquitin-conjugating enzyme E2 S OS=Drosophila an... [more]
UB2SC_XENLA1.096e-4360.36Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus lae... [more]
UBE2S_DROSI1.861e-4361.26Ubiquitin-conjugating enzyme E2 S OS=Drosophila si... [more]
UBE2S_DROSE1.861e-4361.26Ubiquitin-conjugating enzyme E2 S OS=Drosophila se... [more]
UBE2S_DROME1.861e-4361.26Ubiquitin-conjugating enzyme E2 S OS=Drosophila me... [more]
UBE2S_HUMAN5.360e-4361.26Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens ... [more]
UBE2S_BOVIN5.360e-4361.26Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650293 ID=EY650293; Name=EY650293; organism=Citrus sinensis; type=EST; length=859bp
AAATAACATAATTTATCTCCTCATAATCAACCAATCAATCATTCCAAGAA
GAGATCGCTTTCGCAGTCTGTATTTTCAACGTTTATTTTTACATCTCTCT
CCTCTCTCTCCCACTCGCTCTCCCACTCTCTTTCTCTTTCTCTTTCTCTT
TCTCAAGAGATTAATTGAATCAGACAAGGTGCTTTCGGCATTCTGCTTAC
AAATTTTTTATCACTAAGCCTTTAAGTTCAAAAAGCATCGGAACATTCTT
TGCCAAGGTTCTAATTTCCTGCCAGTGACAGCGCAAAAGAAGAGCTATTA
CAAGGATCCTGTCATCTTTTGTTGCCATGGCTACTAATGAAAATCTTCCA
CCGAATGTAATAAAGCAACTTGCTAAGGAATTGAAGAGTCTTGATGAATC
TCCTCCTGAGGGCATTAAAGTAGGCGTTAATGATGATGATTTTTCAACCA
TATTTGCTGATATTGAAGGCCCAGCTGGAACTCCTTATGAGAATGGTGTT
TTCCGCATGAAATTGTTATTATCTCATGACTTCCCGCACTCCCCTCCAAA
AGGTTACTTCCTGACGAAGATATTCCATCCAAATATTGCAACAAATGGTG
AAATTTGTGTGAATACACTAAAAAAAGATTGGAATCCAAGTCTTGGATTG
AGACATGTTCTCATCGTAGTCCCGGTGTTTATTGATTGAACCATTTCCGG
AATCAGCATTGAATGAACAGGCTGGTAAGATGCTGCTCGAAAATATGAGG
AGTATGCAGACATGCCANGATTTACACTGGGATTCATGCCAAGCCAAACC
CAAATTCAGTCAGGAGCTANTTCTGAAATCACACGGCACTGAATGTTGAC
AGACTATAC
back to top