EY702961

Overview
NameEY702961
Unique NameEY702961
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length937
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.753e-24
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 3
Query:  192 VNDFCVA--DLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA--NTVYVKTLKKGDIMIFPQGLLHFQVNSG 596
            + DFCVA  D K      G  C  P    A+DF  SGL  AG T + + + VT   V Q P +N LG+SL R+D A  G  P HTHP A+EIL++V G +  GF+SS+   N ++ K L  GD+ +FP G++HFQVN G
Sbjct:   27 LQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIG 165          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.208e-24
Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 3
Query:  186 AMVNDFCVADLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSG 596
            + + DFCV+    ++     G  C  P +VTADDF FSGL  A   TS + + VT   V     +N LG+SL R+D A  G  P HTHP A+EIL+V  G +  GF++S+  N ++ K L +GD+ +FP+GL+HFQ N G
Sbjct:   28 SQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIG 167          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.108e-24
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  192 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVN 590
            + DFCVAD+       G+ C+ P  V AD F  +        T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FPQGL+HFQ N
Sbjct:   28 LQDFCVADMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFN 161          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.059e-23
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  192 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVN 590
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP GL+HFQ N
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFN 161          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.342e-23
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 3
Query:  192 VNDFCVADLKLSDSP-------AGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSG 596
            + DFC+   K   SP          PC   + VT +DFVFSGL  AGN T     A  P     FP +N LG+S  R DL  G + P H HP A+E+  +V G + +GF+ S+ N VY K +++G++M++P+GL+HFQ+N G
Sbjct:   30 IQDFCIP--KPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSN-NKVYAKVMEEGEMMVYPKGLVHFQMNVG 167          

HSP 2 Score: 24.6386 bits (52), Expect = 1.342e-23
Identity = 9/24 (37.50%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  628 NSPNPGLQITDFALFGNNLSSQLV 699
            NS NPG+Q     +FG+ ++ +L+
Sbjct:  178 NSQNPGIQKIPSVVFGSGINEELL 201          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.383e-23
Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  192 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVN 590
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N
Sbjct:   29 LQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFN 162          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.806e-23
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  192 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVN 590
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K LKKGD+ +FP GL+HFQ N
Sbjct:   29 LQDFCVADEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFN 162          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.359e-23
Identity = 61/146 (41.78%), Postives = 88/146 (60.27%), Query Frame = 3
Query:  189 MVNDFCVADLKLSDSPA---GYPCVPPAMVTADDFVFSGLGVAGNTTS--IINAAVTPAFVAQFPAVNGLGLSLARLDLAK-GGVIPMHTHPAASEILLVVHGCITAGFISSSA----NTVYVKTLKKGDIMIFPQGLLHFQVNSG 596
            M+ D CVAD K    P    G+PC P A VTA+DF F GLG   +  S   + +AVT A V + P +N LG+S+AR+D A  GG  P H+HP A+EIL V  G +  GF+ ++A    + +  + + KG + +FP+GLLH++ + G
Sbjct:   32 MLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVG 177          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.081e-23
Identity = 59/140 (42.14%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  186 AMVNDFCVADLKLSDSPA--GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSG 596
            + + DFCV+    ++     G  C  P +VTADDF F GL  A   TS + + VT   V     +N LG+SL R+D A  G  P HTHP A+EIL+V  G +  GF++S+  N ++ K L +GD+ +FP+GL+HFQ N G
Sbjct:   28 SQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNPDNRLFTKVLNEGDVFVFPEGLIHFQANIG 167          
BLAST of EY702961 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.024e-23
Identity = 54/138 (39.13%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  192 VNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD 602
            + DFCVAD+       G+ C  P  V+++DF  +    +  NT + + + VT   V +FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD+ +FP+ ++HFQ+N   D
Sbjct:   29 LQDFCVADMNSPVRVNGFACKNPMDVSSEDFFNAAKFDMPRNTFNKLGSNVTNLNVMEFPGLNTLGISLARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNKLFSKVVCKGDVFVFPKAMIHFQMNLDHD 166          
The following BLAST results are available for this feature:
BLAST of EY702961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL115_ARATH4.753e-2444.60Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL111_ARATH6.208e-2442.86Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL85_ORYSJ8.108e-2443.28Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL89_ORYSJ1.059e-2343.28Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL32_ARATH1.342e-2340.85Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL87_ORYSJ1.383e-2342.54Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ1.806e-2343.28Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL14_ORYSJ2.359e-2341.78Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL110_ARATH3.081e-2342.14Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL812_ORYSJ4.024e-2339.13Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-C03-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702961 ID=EY702961; Name=EY702961; organism=Citrus sinensis; type=EST; length=937bp
GGGGGGGGGGGGTGTGGGTTGTGTTTTGTGTGNNNNCCCAAANNNNAAAA
TGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTCGACCCACGCGTCCG
ATCAAAATAACTACACTAAATATTAGTCAAAATGCTTCACATTCTCTTCT
TCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTATGGTTAACGAC
TTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGCTATCCTTG
CGTGCCCCCTGCTATGGTTACCGCTGACGACTTCGTATTTTCGGGCCTCG
GCGTGGCCGGAAACACCACGAGTATTATCAACGCGGCAGTGACACCTGCA
TTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCGGACTCTCCTTGGCACG
CCTAGATCTTGCAAAGGGTGGCGTAATCCCAATGCACACTCATCCAGCTG
CTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCCGGGTTCATT
TCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAAGGGAGATAT
CATGATCTTTCCACAAGGGTTGTTGCATTTTCAAGTAAATTCCGGCGCGG
ACGGAACCCCTCGGTTTTGTTAGCTTCAACAGCCCGAATCCTGGACTCCA
AATCACCGATTTCGCCTTATTTGGCAACAACTTGTCTTCCCAATTGGTGG
AGCAAACACTTTTCCTTGAACATGCTTCGGGGAAAAGGCTCAAAGGGATC
CTTGGGGGGGAACCGGCTAGGCTTATTAATTTACAAATTCCTTCCATTGG
AAGTTTGAAGTCCTTAATTTCATTTAACTGCCAAGTGAATTTGAATGCTG
GAAATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGCGCCTCAAAA
GAACCAAGCTTACCAACCCGGGCATTGAAAGTATATA
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