EY702949

Overview
NameEY702949
Unique NameEY702949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPISA_DANRE (Triosephosphate isomerase A OS=Danio rerio GN=tpi1a PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.679e-46
Identity = 92/173 (53.18%), Postives = 110/173 (63.58%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGK 564
            RKFFVGGNWK NG  E + +++  LN                  ++L   +S L     VAAQNC+    GAFTGEIS  M+ + GI WVILGHSERR +  ES E +G KVA+ L   L VIAC+GE LE+REAG+T DVV  QTK IAD V  W+ +VLAYEPVWAIGTGK
Sbjct:    4 RKFFVGGNWKMNGDKESLGELIMTLNTASLNDETDVVCGAPS--IYLDYARSKLDQRIGVAAQNCYKVPKGAFTGEISPAMIKDCGIDWVILGHSERRHVFGESDELIGQKVAHCLESDLGVIACIGEKLEEREAGTTEDVVFEQTKVIADNVKDWTRVVLAYEPVWAIGTGK 174          

HSP 2 Score: 28.1054 bits (61), Expect = 2.679e-46
Identity = 11/17 (64.71%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWL 617
            A+P QAQE+H +LR WL
Sbjct:  176 ASPEQAQEVHEKLRGWL 192          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_SCHMA (Triosephosphate isomerase OS=Schistosoma mansoni GN=TPI PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.490e-46
Identity = 89/177 (50.28%), Postives = 119/177 (67.23%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKV 567
            RKFFVGGNWK NG+ ++  K++ +L+E                 +FL  ++ SL+ + HVAAQNC+    GAFTGEIS  M+ ++G  WVILGHSERR I  ES E + +KV +AL++GL VIAC+GETL +RE+  T +V   Q KAIA+++ S   W  +V+AYEPVWAIGTGKV
Sbjct:    5 RKFFVGGNWKMNGSRDDNDKLLKLLSEAHFDDNTEVLIAPPS--VFLHEIRKSLKKEIHVAAQNCYKVSKGAFTGEISPAMIRDIGCDWVILGHSERRNIFGESDELIAEKVQHALAEGLSVIACIGETLSERESNKTEEVCVRQLKAIANKIKSADEWKRVVVAYEPVWAIGTGKV 179          

HSP 2 Score: 29.261 bits (64), Expect = 3.490e-46
Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKW 614
            ATP QAQE+H  LRKW
Sbjct:  180 ATPQQAQEVHNFLRKW 195          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_ORYLA (Triosephosphate isomerase OS=Oryzias latipes GN=tpi1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.491e-46
Identity = 89/173 (51.45%), Postives = 112/173 (64.74%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGK 564
            R+FFVGGNWK NG  E +++++S LN                  ++L   +S L     VAAQNC+    GAFTGEIS  M+ + G  WVILGHSERR +  E+ E +G KVA+AL   L VIAC+GE LE+REAG+T DV+ AQT+ IA+ V  W  +VLAYEPVWAIGTGK
Sbjct:    4 RRFFVGGNWKMNGNKESLEELMSTLNTASLHEDTEVVCAAPS--IYLDFARSGLDSRISVAAQNCYKVAKGAFTGEISPAMIKDCGADWVILGHSERRHVFGENDELIGQKVAHALESDLSVIACIGEKLEEREAGTTEDVIFAQTQVIAENVMDWEKVVLAYEPVWAIGTGK 174          

HSP 2 Score: 28.4906 bits (62), Expect = 3.491e-46
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKW 614
            ATP QAQE+H +LR W
Sbjct:  176 ATPEQAQEVHEKLRAW 191          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_MOUSE (Triosephosphate isomerase OS=Mus musculus GN=Tpi1 PE=1 SV=3)

HSP 1 Score: 176.407 bits (446), Expect = 4.550e-46
Identity = 89/173 (51.45%), Postives = 111/173 (64.16%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGK 564
            RKFFVGGNWK NG  + + +++  LN                 ++     +  L P   VAAQNC+    GAFTGEIS  M+ +LG  WV+LGHSERR +  ES E +G KV++AL++GL VIAC+GE L++REAG T  VV  QTK IAD V  WS +VLAYEPVWAIGTGK
Sbjct:    5 RKFFVGGNWKMNGRKKCLGELICTLNAANVPAGTEVVCAPPTAYI--DFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVSHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGK 175          

HSP 2 Score: 29.6462 bits (65), Expect = 4.550e-46
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWL 617
            ATP QAQE+H +LR WL
Sbjct:  177 ATPQQAQEVHEKLRGWL 193          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_SCHPO (Triosephosphate isomerase OS=Schizosaccharomyces pombe GN=tpi1 PE=1 SV=4)

HSP 1 Score: 174.096 bits (440), Expect = 4.550e-46
Identity = 89/175 (50.86%), Postives = 115/175 (65.71%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGK 564
            M RKFFVGGN+K NG+ E +K I+  LN  +               ++L   +  ++ D  V AQN + KK GA+TGE SA+ L++ GI + + GHSERR I  ES EFV DK  +AL QGL V+AC+GETL +REA  T++VV  Q  AIAD+V +WS IV+AYEPVWAIGTGK
Sbjct:    1 MARKFFVGGNFKMNGSLESMKTIIEGLNTTKLNVGDVETVIFPQN-MYLITTRQQVKKDIGVGAQNVFDKKNGAYTGENSAQSLIDAGITYTLTGHSERRTIFKESDEFVADKTKFALEQGLTVVACIGETLAEREANETINVVVRQLNAIADKVQNWSKIVIAYEPVWAIGTGK 174          

HSP 2 Score: 31.9574 bits (71), Expect = 4.550e-46
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKW 614
            ATP QAQE+H E+RKW
Sbjct:  176 ATPEQAQEVHAEIRKW 191          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_PIG (Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE=2 SV=4)

HSP 1 Score: 183.341 bits (464), Expect = 1.644e-45
Identity = 102/249 (40.96%), Postives = 141/249 (56.63%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLKGIGC-PSLNVERIFGCGVFL*ITDFLDIFKS 789
            RKFFVGGNWK NG    + ++++ LN  +              ++     +  L P   VAAQNC+    GAFTGEI   M+ +LG  WV+LGHSERR +  ES E +G KVA+AL++GL VIAC+GE L++REAG T  VV  QTK IAD V  W+ +VLAYEPVWAIGTGK    ++ ++ +     G+    +PE    +T     GSV     K +   P ++  R+ G  +     +F+DI  +
Sbjct:    5 RKFFVGGNWKMNGRKNNLGELINTLNAAKLPADTEVVCAPPTAYI--DFARQKLDPKIAVAAQNCYKVANGAFTGEIGPGMIKDLGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWNKVVLAYEPVWAIGTGKTATPQQAQE-VHEKLRGWLKTHVPEAVAHSTRIIYGGSVTGATCKELASQPDVDGFRVSGASL---KPEFVDIINA 247          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.392e-44
Identity = 96/218 (44.04%), Postives = 128/218 (58.72%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLK 699
            RKFFVGGNWK NG  + + ++++ LN  +              ++     +  L P   VAAQNC+    GAFTGEIS  M+ + G  WV+LGHSERR +  ES E +G KVA+ALS+GL VIAC+GE L++REAG T  VV  QTK IAD V  WS +VLAYEPVWAIGTGK    ++ ++ +     G+  + + +    +T     GSV     K
Sbjct:    4 RKFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYI--DFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQE-VHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCK 218          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_MACMU (Triosephosphate isomerase OS=Macaca mulatta GN=TPI1 PE=3 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.392e-44
Identity = 96/218 (44.04%), Postives = 127/218 (58.26%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLK 699
            RKFFVGGNWK NG  + + +++  LN  +              ++     +  L P   VAAQNC+    GAFTGEIS  M+ + G  WV+LGHSERR +  ES E +G KVA+AL++GL VIAC+GE L++REAG T  VV  QTK IAD V  WS +VLAYEPVWAIGTGK    ++ ++ +     G+  + + E    +T     GSV     K
Sbjct:    5 RKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYI--DFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQE-VHEKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCK 219          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_MACFA (Triosephosphate isomerase OS=Macaca fascicularis GN=TPI1 PE=2 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 1.392e-44
Identity = 96/218 (44.04%), Postives = 127/218 (58.26%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLK 699
            RKFFVGGNWK NG  + + +++  LN  +              ++     +  L P   VAAQNC+    GAFTGEIS  M+ + G  WV+LGHSERR +  ES E +G KVA+AL++GL VIAC+GE L++REAG T  VV  QTK IAD V  WS +VLAYEPVWAIGTGK    ++ ++ +     G+  + + E    +T     GSV     K
Sbjct:    5 RKFFVGGNWKMNGRKQNLGELIGTLNAAKVPADTEVVCAPPTAYI--DFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQE-VHEKLRGWLKSNVSEAVAQSTRIIYGGSVTGATCK 219          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_XENLA (Triosephosphate isomerase OS=Xenopus laevis GN=tpi1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.101e-44
Identity = 92/191 (48.17%), Postives = 121/191 (63.35%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKV-------PLQRKLKKYI 597
            RKFFVGGNWK NG  + + ++++ LN G+               ++L   +  L     ++AQNC+    GAFTGEIS  M+ + G  WVILGHSERR +  E  E +G KVA+ALS+G+ VIAC+GE L+QREAG T  VV  QTKAIAD V  WS +VLAYEPVWAIGTGK         + +KL++++
Sbjct:    4 RKFFVGGNWKMNGDKKSLGELINTLNSGKMNADTEVVCGAPA--IYLDFARQKLDAKIALSAQNCYKVAKGAFTGEISPAMIKDCGATWVILGHSERRHVFGECDELIGQKVAHALSEGIGVIACIGEKLDQREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPEQAQEVHKKLREWV 192          
The following BLAST results are available for this feature:
BLAST of EY702949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPISA_DANRE2.679e-4653.18Triosephosphate isomerase A OS=Danio rerio GN=tpi1... [more]
TPIS_SCHMA3.490e-4650.28Triosephosphate isomerase OS=Schistosoma mansoni G... [more]
TPIS_ORYLA3.491e-4651.45Triosephosphate isomerase OS=Oryzias latipes GN=tp... [more]
TPIS_MOUSE4.550e-4651.45Triosephosphate isomerase OS=Mus musculus GN=Tpi1 ... [more]
TPIS_SCHPO4.550e-4650.86Triosephosphate isomerase OS=Schizosaccharomyces p... [more]
TPIS_PIG1.644e-4540.96Triosephosphate isomerase OS=Sus scrofa GN=TPI1 PE... [more]
TPIS_RABIT1.392e-4444.04Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_MACMU1.392e-4444.04Triosephosphate isomerase OS=Macaca mulatta GN=TPI... [more]
TPIS_MACFA1.392e-4444.04Triosephosphate isomerase OS=Macaca fascicularis G... [more]
TPIS_XENLA3.101e-4448.17Triosephosphate isomerase OS=Xenopus laevis GN=tpi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-B02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702949 ID=EY702949; Name=EY702949; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGCACACACCGACTCACGCACTCGTCGAACATGGGCAGGAA
GTTCTTCGTCGGCGGTAACTGGAAATGCAATGGAACACCTGAAGAAGTGA
AAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCCATCTTCTGATGTC
GTTGAGGTCGTTGTTAGCCCTCCGTTTCTGTTTCTTGGACTGGTGAAGAG
TTCGTTGAGGCCTGATTTTCATGTTGCGGCACAGAATTGCTGGGTCAAGA
AGGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAATGCTCGTCAATTTG
GGTATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGAGACTCATTTTGAA
TGAATCACATGAGTTTGTTGGGGATAAGGTTGCATATGCACTTTCTCAAG
GTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGAGCAGCGTGAAGCA
GGATCTACTATGGATGTTGTTGCTGCACAAACTAAAGCAATCGCAGATCG
AGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAACCTGTGTGGGCTA
TTGGAACTGGGAAGGTGCCACTCCAGCGCAAGCTCAAGAAATACATTTTG
AACTGAGGAAATGGCTTTTTTGCAAACCCCATTCCTGAAATTTGTTGCGA
CAACACGGAATCATTTACCGAAGGATCCGTTAATTGGTGCAAACTGAAAG
GAATTGGCTGCCCAAGCCTGAATGTTGAACGTATTTTTGGTTGTGGGGTG
TTTCTTTAAATCACGGATTTCCTTGACATCTTTAAATCTGTTTGAGCTGG
AGATAAATTTCTTAATCTTTATTTCAGGGCAGTCTGGCTTGAAAAAATAT
TCTAGGTTGGGGATATATATAAATCCTTTTGGGAAATTTCAGAGAAACCT
TTGCTTTTTTATTACCGCTCCAT
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