EY702949

Overview
NameEY702949
Unique NameEY702949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length923
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_ASHGO (Triosephosphate isomerase OS=Ashbya gossypii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.321e-38
Identity = 79/174 (45.40%), Postives = 108/174 (62.07%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTG 561
            M R FFVGGN+K NG+ + +K+IV  LN                 +L   +   S  P   V AQN + K  GA+TGE S + + ++G  WVILGHSERR   NE  E V +K A+AL +G+ VI C+GETL++++AG T+DVV  Q   + ++V  W+N+V+AYEPVWAIGTG
Sbjct:    1 MARTFFVGGNFKLNGSKQSIKEIVERLNTADLADNVEVVICPPATYLDHAVSLVS-HPQVTVGAQNAYTKASGAYTGENSVDQIKDVGAKWVILGHSERRTYFNEDDEQVAEKTAFALERGVSVILCIGETLDEKKAGVTLDVVKRQLTPVLEKVKDWTNVVIAYEPVWAIGTG 173          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_TRYBB (Triosephosphate isomerase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.903e-37
Identity = 77/170 (45.29%), Postives = 108/170 (63.53%), Query Frame = 1
Query:   67 NWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKV 567
            NWKCNG+ + + +++ + N                 F+ L + K  L  P F +AAQN  + K GAFTGE+S  +L + G+ W++LGHSERR    E++E V DKVA A++ G  VIAC+GETL++RE+G T  VV  Q  AIA ++  + W+ +V+AYEPVWAIGTGKV
Sbjct:   11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVAST--FVHLAMTKERLSHPKFVIAAQNA-IAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKV 177          

HSP 2 Score: 26.5646 bits (57), Expect = 1.903e-37
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWLFCK 626
            ATP QAQE H  +R W+  K
Sbjct:  178 ATPQQAQEAHALIRSWVSSK 197          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_KLULA (Triosephosphate isomerase OS=Kluyveromyces lactis GN=TPI1 PE=3 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 2.152e-37
Identity = 76/174 (43.68%), Postives = 108/174 (62.07%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTG 561
            M R FF+GGN+K NG+   +K+IV  LN                 +L   +  +  R +  ++AQN + K  GA+TGE S E + ++G  WVILGHSERR   NE+ E V +K  +AL  G+KVI C+GETLE+++   T+ VV  Q +A+ ++V  W+N+V+AYEPVWAIGTG
Sbjct:    1 MARTFFIGGNFKMNGSKASIKEIVDRLNGASIPSNVEVVIAPPAIYLDHAVALNK-RKEVKISAQNAYSKASGAYTGENSVEQIKDVGAEWVILGHSERRTYFNETDEIVAEKTKFALDSGVKVILCIGETLEEKQQNITLQVVQRQLQAVLEKVQDWTNVVVAYEPVWAIGTG 173          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.108e-36
Identity = 79/174 (45.40%), Postives = 104/174 (59.77%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTG 561
            M R FFVGGN+K NGT + +K+IV  LN                 +L   +   S +    V  QN + K  GA+TGE S + L ++G  WVILGHSERR   +E  + V +K  +AL QGL VI C+GETLE+++AG T+ VV  Q  A+   V  W+N+V+AYEPVWAIGTG
Sbjct:    1 MARTFFVGGNFKLNGTKKSIKEIVDRLNTASLPENVEVVICPPATYLDYTVSLVS-KKQVTVGGQNTYTKASGAYTGENSVDQLKDVGAKWVILGHSERRTYFHEDDKIVAEKTKFALDQGLGVILCIGETLEEKKAGVTLKVVERQLDAVIAEVKDWTNVVIAYEPVWAIGTG 173          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_COPC7 (Triosephosphate isomerase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TPI PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 2.015e-35
Identity = 92/225 (40.89%), Postives = 121/225 (53.78%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTP-EEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVPLQRKLKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLKGI 705
            M R FFVGGNWK N T     K +V  LN+                 L+L  ++        VAAQN + K+ GAFTGEIS + + + GIP+VILGHSERR + +E+ E V  K   AL  GLKVI C+GETL++RE G T  V   Q  A+  ++    WSNIV+AYEPVWAIGTGKV    + ++  ++    + A  +       T     GSVN    K +
Sbjct:    1 MTRSFFVGGNWKLNPTSLSAAKALVEALNKADLDPSTEVVVAPPA--LYLLPIQEIAGKAVKVAAQNAYFKESGAFTGEISPKQISDAGIPYVILGHSERRTLFHETSEVVALKTRAALDNGLKVILCIGETLKEREEGRTAAVCEEQLSAVVKQLKEEDWSNIVIAYEPVWAIGTGKVATTSQAQETHVD-VRKYLATAVSPKVASETRVIYGGSVNAANSKDL 222          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_DICDI (Triosephosphate isomerase OS=Dictyostelium discoideum GN=tpiA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.105e-33
Identity = 95/257 (36.96%), Postives = 134/257 (52.14%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVPLQRK-------LKKYILN*GNGFFANPIPEICCDNTESFTEGSVNWCKLKGIGCPSLNVERIFGCGVFL*ITDFLDIFKS 789
            R FFVGGN K NG+   ++ +   +NE                + +L  + + L    F V +QNC+    GAFTGEISA MLV+LGIP+VI+GHSERR + +ES E +  K  YA+S GL VI C+GE L  R++ +T  +++ Q K  A      WS IV+AYEPVWAIGTG V   ++       ++K+I        +  + E     T     GSVN      +   S +++     G  L  +DF+ I KS
Sbjct:    5 RTFFVGGNHKMNGSKSMLESLSKGMNES-VENKENVDIFIAPSYPYLEFLSNKLDNKKFKVCSQNCYSVAKGAFTGEISANMLVDLGIPYVIIGHSERRNVFSESSELITKKTKYAISLGLTVILCLGELLADRKSNNTEHILSEQLKDFASFTPEEWSKIVIAYEPVWAIGTGAVATPQEAQDTHVFIRKWI--------SEKVSEDVAKKTSIMYGGSVNADNCHNLSKQS-DIDGFLVGGASLVASDFIAIIKS 251          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_PLAFA (Triosephosphate isomerase OS=Plasmodium falciparum GN=TPI PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.643e-32
Identity = 69/175 (39.43%), Postives = 99/175 (56.57%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGK 564
            M RK+FV  NWKCNGT E +K + +  N                   +    +  L+  F    QN      G++TGE+SAE+  +L I +VI+GH ERR   +E+ E V +K+  +L   LK + C GE+LEQRE   T++V+  Q KA  D + ++ N++LAYEP+WAIGTGK
Sbjct:    1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILAYEPLWAIGTGK 174          

HSP 2 Score: 24.2534 bits (51), Expect = 1.643e-32
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRK 611
            ATP QAQ +H E+RK
Sbjct:  176 ATPEQAQLVHKEIRK 190          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_PLAF7 (Triosephosphate isomerase OS=Plasmodium falciparum (isolate 3D7) GN=TPI PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.643e-32
Identity = 69/175 (39.43%), Postives = 99/175 (56.57%), Query Frame = 1
Query:   40 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGK 564
            M RK+FV  NWKCNGT E +K + +  N                   +    +  L+  F    QN      G++TGE+SAE+  +L I +VI+GH ERR   +E+ E V +K+  +L   LK + C GE+LEQRE   T++V+  Q KA  D + ++ N++LAYEP+WAIGTGK
Sbjct:    1 MARKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHY-DHTRKLLQSKFSTGIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILAYEPLWAIGTGK 174          

HSP 2 Score: 24.2534 bits (51), Expect = 1.643e-32
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRK 611
            ATP QAQ +H E+RK
Sbjct:  176 ATPEQAQLVHKEIRK 190          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPISL_HUMAN (Putative triosephosphate isomerase-like protein LOC286016 OS=Homo sapiens PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 2.791e-32
Identity = 73/173 (42.20%), Postives = 94/173 (54.34%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGK 564
            RKFFVG NWK NG  + + +++   N                 +    L +  L P   VA QNC+    GAFTGEIS  M+ +LG+ WV+                   KVA+AL++ L VIAC+GE L++REAG T  VV  QTK IAD V  WS ++LAY+PVWA GTGK
Sbjct:    5 RKFFVGRNWKMNGRKKCLGELIGTQNAATVPADTKVICALATAYN--ELARQKLAPKIAVAPQNCYKVTNGAFTGEISPGMVKDLGVTWVV-------------------KVAHALAERLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVILAYDPVWATGTGK 156          

HSP 2 Score: 29.6462 bits (65), Expect = 2.791e-32
Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 3
Query:  567 ATPAQAQEIHFELRKWL 617
            ATP QAQE+H +LR WL
Sbjct:  158 ATPQQAQEVHKKLRGWL 174          
BLAST of EY702949 vs. ExPASy Swiss-Prot
Match: TPIS_BACFR (Triosephosphate isomerase OS=Bacteroides fragilis GN=tpiA PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.014e-32
Identity = 79/175 (45.14%), Postives = 99/175 (56.57%), Query Frame = 1
Query:   46 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESHEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGK 564
            RK  V GNWK N T +E   +   LNE                F+ L  V   +      V A+NC  K+ GA+TGE+SA M+ + G  +VILGHSERR    E+ E + DKV  AL+ GL  I C+GE LE+REA    +VVAAQ  ++ D     +S IVLAYEPVWAIGTGK
Sbjct:    2 RKNIVAGNWKMNKTLQEGIALAKELNEALANEKPNCDVIICTPFIHLASVTPLVDAAKIGVGAENCADKESGAYTGEVSAAMVASTGAKYVILGHSERRAYYGETVEILKDKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQLASVFDLSAEDFSKIVLAYEPVWAIGTGK 176          

HSP 2 Score: 23.483 bits (49), Expect = 8.014e-32
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  567 ATPAQAQEIHFELR 608
            A+PAQAQEIH  +R
Sbjct:  178 ASPAQAQEIHAFIR 191          
The following BLAST results are available for this feature:
BLAST of EY702949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_ASHGO3.321e-3845.40Triosephosphate isomerase OS=Ashbya gossypii GN=TP... [more]
TPIS_TRYBB1.903e-3745.29Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_KLULA2.152e-3743.68Triosephosphate isomerase OS=Kluyveromyces lactis ... [more]
TPIS_CANGA3.108e-3645.40Triosephosphate isomerase OS=Candida glabrata GN=T... [more]
TPIS_COPC72.015e-3540.89Triosephosphate isomerase OS=Coprinopsis cinerea (... [more]
TPIS_DICDI1.105e-3336.96Triosephosphate isomerase OS=Dictyostelium discoid... [more]
TPIS_PLAFA1.643e-3239.43Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPIS_PLAF71.643e-3239.43Triosephosphate isomerase OS=Plasmodium falciparum... [more]
TPISL_HUMAN2.791e-3242.20Putative triosephosphate isomerase-like protein LO... [more]
TPIS_BACFR8.014e-3245.14Triosephosphate isomerase OS=Bacteroides fragilis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-014-B02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702949 ID=EY702949; Name=EY702949; organism=Citrus sinensis; type=EST; length=923bp
CCACGCGTCCGCACACACCGACTCACGCACTCGTCGAACATGGGCAGGAA
GTTCTTCGTCGGCGGTAACTGGAAATGCAATGGAACACCTGAAGAAGTGA
AAAAGATAGTGAGCGTACTCAATGAAGGTCAAGTTCCATCTTCTGATGTC
GTTGAGGTCGTTGTTAGCCCTCCGTTTCTGTTTCTTGGACTGGTGAAGAG
TTCGTTGAGGCCTGATTTTCATGTTGCGGCACAGAATTGCTGGGTCAAGA
AGGGAGGTGCTTTCACCGGTGAGATTAGTGCGGAAATGCTCGTCAATTTG
GGTATTCCTTGGGTCATTCTTGGTCATTCTGAAAGGAGACTCATTTTGAA
TGAATCACATGAGTTTGTTGGGGATAAGGTTGCATATGCACTTTCTCAAG
GTTTGAAGGTGATTGCTTGTGTTGGTGAGACACTTGAGCAGCGTGAAGCA
GGATCTACTATGGATGTTGTTGCTGCACAAACTAAAGCAATCGCAGATCG
AGTCTCAAGCTGGTCAAACATTGTTTTGGCCTATGAACCTGTGTGGGCTA
TTGGAACTGGGAAGGTGCCACTCCAGCGCAAGCTCAAGAAATACATTTTG
AACTGAGGAAATGGCTTTTTTGCAAACCCCATTCCTGAAATTTGTTGCGA
CAACACGGAATCATTTACCGAAGGATCCGTTAATTGGTGCAAACTGAAAG
GAATTGGCTGCCCAAGCCTGAATGTTGAACGTATTTTTGGTTGTGGGGTG
TTTCTTTAAATCACGGATTTCCTTGACATCTTTAAATCTGTTTGAGCTGG
AGATAAATTTCTTAATCTTTATTTCAGGGCAGTCTGGCTTGAAAAAATAT
TCTAGGTTGGGGATATATATAAATCCTTTTGGGAAATTTCAGAGAAACCT
TTGCTTTTTTATTACCGCTCCAT
back to top