EY650205

Overview
NameEY650205
Unique NameEY650205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_SHIBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.481e-16
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 2
Query:   47 VQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFADV 376
            ++E  EA ALG    PVL+GPV++L L K  KG  + F  LSL++ I+PVY++V+AEL+  G  W+Q DEP L+L+L    L A+  AY  LQ  +    +L+ T F  V
Sbjct:  144 LEEVDEALALGHNVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQV---KLLLTTYFEGV 247          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_SHIB3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.481e-16
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 2
Query:   47 VQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFADV 376
            ++E  EA ALG    PVL+GPV++L L K  KG  + F  LSL++ I+PVY++V+AEL+  G  W+Q DEP L+L+L    L A+  AY  LQ  +    +L+ T F  V
Sbjct:  144 LEEVDEALALGHNVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQV---KLLLTTYFEGV 247          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.481e-16
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFADVPAEH 388
            E   +  F   +     E +EA+AL +   PVL+GP++YL L K  +     FS L L+ +++P Y  ++  L A+G  W+Q DEP L +DL    L+AF+ AY+ L    +G  +L+ T FA V AEH
Sbjct:  124 EFDRETGFGPGTEWLFDEVEEAKALRLNPKPVLIGPLTYLHLGKERQA---GFSRLELLPRLLPAYAAILRRLHASGVPWVQMDEPILGMDLPPEWLEAFAPAYAALAE--AGPKLLLATYFASV-AEH 246          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_ENT38 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Enterobacter sp. (strain 638) GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.481e-16
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 2
Query:   47 VQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSF 367
            + E  EA ALG    PVL+GPV+YL L K  KG  + F  LSL++ I+PVY++V+AEL   G  W+Q DEP L+L+L    L AF  AY     +L+G   L+ T++
Sbjct:  144 LDEVDEALALGHNIKPVLLGPVTYLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGVEWVQIDEPALVLELPQEWLDAFKPAY----DALTGQTKLLLTTY 243          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.481e-16
Identity = 43/133 (32.33%), Postives = 72/133 (54.14%), Query Frame = 2
Query:   35 SHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFADVPAEHKNTHFFEGCTGFGXD 433
            S K   E+ EA+ALG++T PV +GP ++L L++  +  E       L++ +  VY EV+A+    GA W+Q DEP L+LD +   ++ F   Y+++ S+     VL+ T F  +   ++  +   G  G G D
Sbjct:  140 STKPFDEFNEAKALGIDTKPVFIGPYTFLKLARTPEATELELDK-GLVNAVAAVYVEVLAKFNELGAAWVQLDEPYLVLDKEPGDVELFKTLYTKILSAKGNVKVLLNTYFGHIADVYETVNLL-GFDGIGLD 270          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.481e-16
Identity = 43/133 (32.33%), Postives = 72/133 (54.14%), Query Frame = 2
Query:   35 SHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFADVPAEHKNTHFFEGCTGFGXD 433
            S K   E+ EA+ALG++T PV +GP ++L L++  +  E       L++ +  VY EV+A+    GA W+Q DEP L+LD +   ++ F   Y+++ S+     VL+ T F  +   ++  +   G  G G D
Sbjct:  140 STKPFDEFNEAKALGIDTKPVFIGPYTFLKLARTPEATELELDK-GLVNAVAAVYVEVLAKFNELGAAWVQLDEPYLVLDKEPGDVELFKTLYTKILSAKGNVKVLLNTYFGHIADVYETVNLL-GFDGIGLD 270          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_SODGM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Sodalis glossinidius (strain morsitans) GN=metE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.464e-16
Identity = 48/109 (44.04%), Postives = 66/109 (60.55%), Query Frame = 2
Query:   47 VQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFAD 373
            + E  EA ALG    PVL+GPVSYL L K  KG  ++F  LSL+  ++PVYK+V+ EL   G  W+Q DE  L+L+L     QA+ +AY E   +L G   L+ T++ D
Sbjct:  144 LDEVDEALALGHRVKPVLLGPVSYLWLGK-VKG--EAFDRLSLLPALLPVYKQVLGELAKRGVDWVQIDEQALVLELP----QAWREAYREAYQALQGQTKLLLTTYFD 245          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.464e-16
Identity = 46/110 (41.82%), Postives = 63/110 (57.27%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKS--FSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQ 325
            E   D  F  +  +  +E +EA+ALG    PVL+GP+SYL L K     +++  F  L L+D+++PVY EV+  L A G  W+Q DEP L LDL      AF  AY+ LQ
Sbjct:  129 EFSVDQQFQLSWTQLFEEVEEAKALGHAIKPVLIGPLSYLWLGKLKGEADQTQTFDKLELLDRLLPVYGEVLDRLAAQGVEWVQIDEPILALDLPQDWKNAFERAYNLLQ 238          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_BURS3 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia sp. (strain 383) GN=metE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.464e-16
Identity = 47/125 (37.60%), Postives = 71/125 (56.80%), Query Frame = 2
Query:    2 ELGPDVNFSYASHKAVQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFADV 376
            E   D NFS    + +Q+  EA+A G+   PV+VGPV+YL L K     ++    L+L+ K++PVY  ++  L A G  W+Q DEP L+ +LD+   QAF  AY+ L++      VL+ T F  +
Sbjct:  133 EFHADTNFSLDPSRLLQQLAEAQAQGVAAKPVIVGPVTYLWLGKAKDDSDR----LALLPKLLPVYGALLDTLTAQGVEWVQIDEPILVTELDAAWQQAFRTAYAALET--RRIKVLLATYFGQL 251          
BLAST of EY650205 vs. ExPASy Swiss-Prot
Match: METE_SHIDS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.105e-15
Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 2
Query:   47 VQEYKEARALGMETVPVLVGPVSYLLLSKPAKGVEKSFSLLSLIDKIIPVYKEVVAELKAAGATWIQFDEPTLILDLDSHKLQAFSDAYSELQSSLSGXNVLIETSFADV 376
            ++E  EA ALG    PVL+GPV++L L K  KG  + F  LSL++ I+PVY++V+AEL   G  W+Q DEP L+L+L    L A+  AY  LQ  +    +L+ T F  V
Sbjct:  144 LEEVDEALALGHNVKPVLLGPVTWLWLGK-VKG--EQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQV---KLLLTTYFEGV 247          
The following BLAST results are available for this feature:
BLAST of EY650205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
METE_SHIBS6.481e-1643.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIB36.481e-1643.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_METCA6.481e-1637.215-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ENT386.481e-1644.865-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO6.481e-1632.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD6.481e-1632.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SODGM8.464e-1644.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU58.464e-1641.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURS38.464e-1637.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SHIDS1.105e-1543.645-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-008-D10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650205 ID=EY650205; Name=EY650205; organism=Citrus sinensis; type=EST; length=476bp
TGAATTGGGACCGGATGTCAACTTCTCTTATGCATCTCACAAGGCTGTTC
AAGAGTATAAGGAAGCCAGAGCTCTTGGCATGGAAACTGTTCCTGTCCTT
GTAGGCCCTGTTTCCTATTTGTTGTTATCTAAACCAGCAAAGGGTGTAGA
GAAATCCTTTTCTCTTCTTTCCCTAATTGACAAGATTATTCCTGTCTACA
AGGAAGTTGTGGCTGAGCTAAAGGCTGCTGGTGCCACCTGGATTCAGTTT
GATGAGCCAACTCTTATCCTGGACCTTGATTCTCACAAATTACAAGCATT
TTCTGATGCATACTCAGAGCTGCAGTCATCGCTATCTGGTTNGAATGTGT
TAATTGAGACGTCCTTTGCTGATGTTCCTGCAGAACATAAAAATACTCAC
TTCTTTGAAGGGTGTACTGGATTTGGGNTTGACCNTATCGTGGNACAAGA
CACTNGATTNGATAAAACTGAATTNC
back to top