EY702930

Overview
NameEY702930
Unique NameEY702930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.484e-30
Identity = 70/119 (58.82%), Postives = 85/119 (71.43%), Query Frame = 2
Query:   11 ERPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 364
            + PPH HPRA+EI  VLEGTL+VGFVTS+  NNTL +KVLNKGDVFVFP GLIHFQFN      A A +AL+SQ PG +TIA+ VFG+ P I+ + L KAFQ+    +  LQ +F   N
Sbjct:  105 QNPPHTHPRATEILTVLEGTLHVGFVTSNP-NNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVLAKAFQVGKGTIDWLQAQFWENN 222          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.355e-30
Identity = 69/119 (57.98%), Postives = 84/119 (70.59%), Query Frame = 2
Query:   11 ERPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 364
            + PPH HPRA+EI  VLEGTLYVGFVTS+  +N   +KVLNKGDVFVFP GLIHFQFN      A A +AL+SQ PG +TIA+ VFG+ P I+ D L KAFQ++   +  LQ +F   N
Sbjct:  105 QNPPHTHPRATEILTVLEGTLYVGFVTSNP-DNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQFWENN 222          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 9.355e-30
Identity = 64/112 (57.14%), Postives = 79/112 (70.54%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPHIHPRASEI LV++G L VGFV+S+  N TL +K+L  GDVFV P GL+ F  NIGKTNA A  A+ SQ PG +++ D VFG+ P I+P  L KAF LD  IV+ L+  F
Sbjct:  107 PPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.084e-29
Identity = 65/117 (55.56%), Postives = 85/117 (72.65%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 364
            PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGD FVFP+ +IHFQ N+     A A S+LNSQ PG +TIA  VFG+ P I+ D L KAFQ++ K++  L+++F   N
Sbjct:  109 PPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQFWESN 223          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.084e-29
Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 364
            PPH+HPRA+E+  VLEGTLYVGFVTS+   N L +KV++KGDVFVFP+ +IHFQ N+     A A SAL+SQ PG +TIA  +FG+ P I+ D L KAFQ++ K++  L+++F   N
Sbjct:  109 PPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQFSENN 223          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.084e-29
Identity = 67/117 (57.26%), Postives = 85/117 (72.65%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTN-AAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFINGN 364
            PPHIHPRA+E+  VLEGTLYVGFVTS+   N L +KV+ KGDVFVFP+ +IHFQ N+     A A SAL+SQ PG +TIA  VFG+ P I+ D L KAFQ++ K++  LQ++F   N
Sbjct:  109 PPHIHPRATELLTVLEGTLYVGFVTSNP--NKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAFQVEKKLIDWLQSQFWENN 223          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.084e-29
Identity = 65/112 (58.04%), Postives = 77/112 (68.75%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH HPR SEIFLV++G L+VGFV+S++ N TL  KVL  GDVFVFP+GLI F  NIGKTNA   +A  SQ PG + I + VFG+ P I+P  L KAF LD   VK  Q  F
Sbjct:  110 PPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAFALDFNKVKYFQAVF 221          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.555e-29
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPHIHPRAS+I LVL+G L VGFV+S+  N TL +K+L  GDVF FP GL+ F  N GKT+A A   + SQ PG + I D VFG+NP I+P  L KAF LD  IV+ +Q  F
Sbjct:  110 PPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVF 221          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.133e-28
Identity = 66/116 (56.90%), Postives = 78/116 (67.24%), Query Frame = 2
Query:   11 ERPPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            + PPH HPRA+EI  VL+GTL VGFVTS+Q    N    K+L  GDVFVFPQGLIHFQ N G   A A +AL+SQ PG +TIA+ VFG+ P I  D L KAF +D   V  +Q KF
Sbjct:  111 QNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH HPRA+EI  V EGTL VGFVT+    N L  + ++KG+VFVFP+GL+HFQ N G T+A A +A NSQ PG  +IADT+FGA P +  D L +AFQ+D  +V+ +++KF
Sbjct:  110 PPHTHPRATEIMFVAEGTLDVGFVTTA---NKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIKSKF 218          
The following BLAST results are available for this feature:
BLAST of EY702930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL89_ORYSJ5.484e-3058.82Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL811_ORYSJ9.355e-3057.98Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL13_ARATH9.355e-3057.14Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL84_ORYSJ2.084e-2955.56Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ2.084e-2954.70Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]
GL812_ORYSJ2.084e-2957.26Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL15_ARATH2.084e-2958.04Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GL12_ARATH3.555e-2956.25Putative germin-like protein subfamily 1 member 2 ... [more]
GL41_ORYSJ5.133e-2856.90Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL32_ORYSJ6.704e-2854.46Putative germin-like protein 3-2 OS=Oryza sativa s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702930 ID=EY702930; Name=EY702930; organism=Citrus sinensis; type=EST; length=571bp
CCACGCGTCCGAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCT
TCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAA
CTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGAGATGTTTTTGT
GTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATG
CAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTGAAGTTACCATA
GCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCCGATTTTCTTGG
CAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATCTTCAAAATAAGT
TCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTTAATATAAATGGC
CTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTATCATATCTTAAT
TAATGTAATAAAAGAGGTCTCTCATGAACCTCTCTCCAGGCTGACTGTGG
CCATGTAATAAACATAATTGTTATTGTTTTTATTTAGCAGCTAAGCCTTT
TCCAAAAAAAAAAAAAAAAAA
back to top