EY702930

Overview
NameEY702930
Unique NameEY702930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:374..944. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.157e-26
Identity = 54/112 (48.21%), Postives = 81/112 (72.32%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH+HPRA+E+  V+EG+++VGF+++   NNTL +KVLN G+ FV P+GL+HFQ+N+G+  A   +A NSQ PG V +  T+FG+ P I    L +AF+ D   V++L++KF
Sbjct:  110 PPHLHPRATEVGTVIEGSVFVGFLST---NNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKF 218          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.679e-26
Identity = 55/112 (49.11%), Postives = 79/112 (70.54%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH HPRA+E  +V+EG+++VGF+T+   NNTL +KVLN G++FV P+GL+HFQ+N+GK  A   ++ NSQ PG   +  T+FG+NP+I    L K F+ D   V  L++KF
Sbjct:  110 PPHSHPRATEAGVVIEGSVFVGFLTT---NNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKF 218          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 65/115 (56.52%), Postives = 77/115 (66.96%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLN--NTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGK-AFQLDPKIVKDLQNKF 352
            PPH HPRA+E+F+VLEGT YVGFVTS+  +  N L AKVLNKGDVFVFPQGLIHFQ NIG       S L+SQ PG +TIA+ VFG      P+ L +  F L P I   + + F
Sbjct:  109 PPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG------PEHLSQLMFLLRPSISMRIWSSF 217          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 8.195e-26
Identity = 57/112 (50.89%), Postives = 80/112 (71.43%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N GK  AA  SA NSQ PG  +I  T+FGA+P++  D L + FQ++ + V+ +++KF
Sbjct:  115 PPHTHPRASEMVFVMEGELDVGFITTA---NVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKF 223          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.398e-25
Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFI 355
            PPH HPRA+EI  V+EG+L VGFVT+    N L  + + KG+VFVFP+GL+HFQ N G T A A +ALNSQ PG  +IA  +FGA P +  D L +AFQ+D  +V+ +++KF+
Sbjct:  110 PPHTHPRATEIIFVVEGSLDVGFVTTA---NKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIKSKFV 219          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.067e-25
Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH HPRASE+  V+EG L VGF+T+    N L++K + KG+VFVFP+GL+HFQ N G+  AA  SA NSQ PG  +I  T+FGA+P +  D L + FQ++ + V+ +++KF
Sbjct:  115 PPHTHPRASEMVFVMEGELDVGFITTA---NVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKF 223          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.067e-25
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH+HPRASEI  VLEG LYVGFVT+      LIAK LNKGDVF FP+GLIHFQ NI  + A+  +A +SQ PG  ++  ++FGA P    D L K+FQL  K VK ++ ++
Sbjct:  104 PPHVHPRASEIIFVLEGQLYVGFVTTA---GKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLVASLFGALPD---DILAKSFQLKHKQVKKIKLRY 209          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.443e-24
Identity = 53/115 (46.09%), Postives = 76/115 (66.09%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKFING 361
            PPH+HPRA+E+ +VL G L VG + +  + N   +KV+  G+ FV P+GL+HFQFN+GKT A    + NSQ PG V +  T+FG+NP I    L KA ++D  +V+ L++KF  G
Sbjct:  114 PPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKFTGG 228          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.873e-24
Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNK 349
            PPH HPRA+E+  VL+GTL VGF+T+    N L  K ++ GDVFVFP+GL+HFQ N G T AA  SA NSQ PG  ++A T+F A+P +    L KAFQ+  K V+ ++++
Sbjct:  108 PPHTHPRATEMVFVLQGTLDVGFITTA---NKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSR 215          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.873e-24
Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNK 349
            PPH HPRA+E+  VLEG L VGF+T+    N L  K +  G+VFVFP+GL+HFQ N GK+ A+  SA NSQ PG  ++A T+F A P++  D L K FQ+  K+V  ++ +
Sbjct:  107 PPHTHPRATEVVYVLEGELEVGFITTA---NKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKER 214          
The following BLAST results are available for this feature:
BLAST of EY702930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GLT1_ARATH2.157e-2648.21Germin-like protein subfamily T member 1 OS=Arabid... [more]
GLT2_ARATH3.679e-2649.11Germin-like protein subfamily T member 2 OS=Arabid... [more]
GLP1_MESCR4.804e-2656.52Germin-like protein OS=Mesembryanthemum crystallin... [more]
NEC1_NICPL8.195e-2650.89Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL13_ORYSJ1.398e-2552.21Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
NEC1_NICLS4.067e-2550.00Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL25_ARATH4.067e-2554.46Probable germin-like protein subfamily 2 member 5 ... [more]
GL34_ORYSJ3.443e-2446.09Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL52_ORYSJ5.873e-2450.45Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL22_ARATH5.873e-2448.65Germin-like protein subfamily 2 member 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702930 ID=EY702930; Name=EY702930; organism=Citrus sinensis; type=EST; length=571bp
CCACGCGTCCGAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCT
TCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAA
CTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGAGATGTTTTTGT
GTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATG
CAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTGAAGTTACCATA
GCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCCGATTTTCTTGG
CAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATCTTCAAAATAAGT
TCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTTAATATAAATGGC
CTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTATCATATCTTAAT
TAATGTAATAAAAGAGGTCTCTCATGAACCTCTCTCCAGGCTGACTGTGG
CCATGTAATAAACATAATTGTTATTGTTTTTATTTAGCAGCTAAGCCTTT
TCCAAAAAAAAAAAAAAAAAA
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