EY702930

Overview
NameEY702930
Unique NameEY702930
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.401e-17
Identity = 44/111 (39.64%), Postives = 67/111 (60.36%), Query Frame = 2
Query:   20 PHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PH HP  +E  +V+EG++ VGF+T+   N TL +KV+  GD+FV P GLIH++ N+GKT     + +    P EV +  T+    P+I  + L  AF+ D K +  L++KF
Sbjct:  118 PHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.401e-17
Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            PPH HPRASE+ LVL G + VGF T+    N L +KV+ + ++FV P+GL HFQ N+G  NA+  +  +SQ PG VT    +F   P++  + L K F +    V  +++KF
Sbjct:  113 PPHSHPRASELVLVLSGEVMVGFTTAA---NRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.077e-17
Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 343
            PPHIHPRASE+ +V++G L VG V + + N T+  + L  GD+FVFP+G++HFQFN G    A A+SA  S  PG +++   +FG+   I+   L K+   D   V  L+
Sbjct:   98 PPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGS--GIDDTILDKSMHTDQATVDQLK 204          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.816e-15
Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 343
            P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   99 PFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPG-LQIVDFALFKN-DLATELIAQTTLLDAPQIKKLK 202          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.508e-15
Identity = 46/112 (41.07%), Postives = 68/112 (60.71%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 352
            P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +FVFPQGL+HFQ+N G T A A++A +S  PG + I D    AN ++   ++ K   L    V+ L++KF
Sbjct:  108 PLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG-LQILDYALFAN-NLPTSYVVKGTFLAEAEVRRLKSKF 215          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.500e-15
Identity = 47/109 (43.12%), Postives = 63/109 (57.80%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 343
            P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   99 PFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPG-LQILDFALFKN-DLPTELIAQTTFLDAAQIKKLK 202          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.230e-14
Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 268
            P H HPR+SE+  V++G ++ GFV +   NN +   VL KGDVFVFP+GL+HF  + G   A A+S  NSQ PG V I + VFG
Sbjct:  104 PFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNIGE-VFG 183          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.219e-14
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 343
            P H HP ASE+  VL+G++  GF++S    N++  + L  G V VFPQGL+HFQ N GKT AAA    +S  PG + I D    AN +++ + +     L P  VK L+
Sbjct:   97 PMHTHPGASEVLFVLDGSITAGFISSA---NSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPG-LQILDFALFAN-TLSTELVSATTFLPPATVKTLK 200          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.219e-14
Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAA-AYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLD 319
            PPH+HPRASE+ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++ + F + P    + L  A+ ++
Sbjct:  106 PPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
BLAST of EY702930 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.196e-14
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 2
Query:   17 PPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIG-KTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 343
            PPH HPRASE  LVL G++ VGF  +   +  L  ++L  G+ FVFP+ ++HF +N+     A   S LNSQ PG   +  + F   P +  + L KAF++  + V+ +Q
Sbjct:  113 PPHSHPRASEAALVLSGSVLVGFADT---SYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDVQRIQ 219          
The following BLAST results are available for this feature:
BLAST of EY702930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GLT3_ARATH1.401e-1739.64Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL12_ORYSJ1.401e-1741.96Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL91_ORYSJ4.077e-1742.73Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]
AB19B_PRUPE3.816e-1543.12Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GL813_ORYSJ6.508e-1541.07Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
AB19A_PRUPE8.500e-1543.12Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL34_ARATH3.230e-1450.00Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GLP1_BRANA4.219e-1441.28Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL11_ARATH4.219e-1440.20Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL31_ORYSJ7.196e-1438.18Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H05-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702930 ID=EY702930; Name=EY702930; organism=Citrus sinensis; type=EST; length=571bp
CCACGCGTCCGAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAATCT
TCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGACCAA
CTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGAGATGTTTTTGT
GTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAAATG
CAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTGAAGTTACCATA
GCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCCGATTTTCTTGG
CAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATCTTCAAAATAAGT
TCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTTAATATAAATGGC
CTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTATCATATCTTAAT
TAATGTAATAAAAGAGGTCTCTCATGAACCTCTCTCCAGGCTGACTGTGG
CCATGTAATAAACATAATTGTTATTGTTTTTATTTAGCAGCTAAGCCTTT
TCCAAAAAAAAAAAAAAAAAA
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