EY702927

Overview
NameEY702927
Unique NameEY702927
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702927 vs. ExPASy Swiss-Prot
Match: METE_SULAC (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus acidocaldarius GN=metE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12
Identity = 49/213 (23.00%), Postives = 104/213 (48.83%), Query Frame = 3
Query:   21 VQSFPSHCVKPPIIYGDVSRPKAMPVFWSSLAQSMT-ARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDDAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRYHQLKKLLTEINRCLLC*KPNI 656
            V+ +  H  + P + G +     M +   + A+S++  + +K  +TGP TI  WS+    + + +  + +A  I  E+++L   GI VIQ+D+ A+      RK +    ++WA+ S   +  GV    ++  H+CY  ++ +   +  +  D I +     +   + +F+   K+   IG GV D+H+ +   ++++  ++ + L   KP +
Sbjct:   89 VRVWGDHYYRKPSVTGKIKYNNPMLLDEVNFAKSVSYTQNLKVTITGPYTISEWSYNEYYKTQRDMAFDLAKVINQEIKNLVDIGIKVIQVDEPAIH----TRKED----VEWAIDSINESIKGV--NVKVVLHVCYGEYSYLEPHLDKLKVDQINLALKNYNYTPVKLFK---KWDREIGVGVIDVHNRKIESVEEVAEDLRKLLEYFKPEM 288          
BLAST of EY702927 vs. ExPASy Swiss-Prot
Match: METE_SULTO (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus tokodaii GN=metE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 48/214 (22.43%), Postives = 102/214 (47.66%), Query Frame = 3
Query:   18 PVQSFPSHCVKPPIIYGDVSRPKAMPVFWSSLAQSMT-ARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDDAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRYHQLKKLLTEINRCLLC*KPNI 656
            PV+ + ++  + P +   V   K M V     A+S++    +K  +TGP TI  WS+    + + +  + +A  I  E++ L +AG  +IQ+D+ A+          H   ++WA+ +   +  G+    ++  H+CY  ++ +   +  ++ D I +     + + + +F+   K+   IG GV D+H+ R    +++  ++   L   KP +
Sbjct:   87 PVRVWGTNYYRKPSVVSKVEYIKPMLVDEFLFAKSVSYTENLKITITGPYTIAEWSYNEYYKSKKDLAFDLAKVINSEMKKLVEAGAKIIQVDEPAIH--------THKNEVEWAIEAVNESIKGI--NVKVVMHVCYGEYSYLEPYLDKLNVDQINLALKNYNYEPVKLFK---KWDREIGVGVIDVHNKRIETPEEVANDLKMLLDYFKPEM 287          
BLAST of EY702927 vs. ExPASy Swiss-Prot
Match: METE_SULIY (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=metE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 51/209 (24.40%), Postives = 101/209 (48.33%), Query Frame = 3
Query:   18 PVQSFPSHCVKPPIIYGDVSRPKAMPVFWSSLAQSMTARP-MKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDDAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYG--AGIGPGVYDIHSPRYHQLKKLLTEINRCL 635
            PV+ + +   + P +   +   K M V   + A+S++    +K  +TGP TI+ WS+    + + +  + +A AI  E+++L +AG  +IQID+ AL      R+ +    + W V +      GV    ++  H+CY  ++ +   + ++  D I       + K L + +   +YG    +G GV D+H+ R    +++  +I + L
Sbjct:   87 PVRVWGTAYYRKPSVVSKIEYKKPMLVDEFTFAKSVSYTDNLKITITGPYTIVEWSYNEYYKNKKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALH----TRRED----VSWGVEAVNEAVKGV--NAKLVMHICYGEYSFVAPYLNELKVDQINFAFKIYNYKPLELLK---RYGFDKELGAGVIDVHNRRIETSEEVANDIRKIL 282          
The following BLAST results are available for this feature:
BLAST of EY702927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 273
Match NameE-valueIdentityDescription
METE_SULAC6.781e-1223.00Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULTO4.395e-1122.43Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULIY9.792e-1124.40Probable methylcobalamin:homocysteine methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H02-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702927 ID=EY702927; Name=EY702927; organism=Citrus sinensis; type=EST; length=902bp
TTCTACAACCCACGCGTCCGGTGCAATCCTTTCCCTCTCACTGTGTGAAG
CCACCCATCATCTATGGTGACGTGAGCCGTCCCAAGGCTATGCCCGTCTT
CTGGTCCTCCTTGGCTCAGAGCATGACTGCTCGCCCAATGAAGGGAATGC
TTACTGGCCCTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAG
CCCAGACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGT
CGAGGATCTTGAGAAGGCAGGCATTAACGTTATTCAAATTGATGATGCTG
CCTTGAGGGAAGGATTGCCTCTTAGGAAATCTGAGCATGCTTTCTACTTG
GACTGGGCAGTCCACTCCTTCAGAATCACCAACTGTGGTGTCCAGGACAC
TACCCAGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCC
ACTCAATTATCGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGT
TCTGATGAGAAGCTCCTGTCTGTCTTCCGTGAGGGAGTCAAGTATGGTGC
TGGAATTGGCCCTGGTGTCTATGACATCCACTCTCCCAGATACCATCAAC
TGAAGAAATTGCTGACAGAAATCAACAGATGCTTGCTGTGCTAGAAACCA
AACATTTGTGGNTAAACCCTGACTGTGGTCTTAAGACTCGCAAGTACACT
GAGGTGAAAGCAGCCCTCTCAACATGGNTGCTGCTGCAAACTACTCCGCA
CCAGCTTGCCAGTGGCCAGTGAGTGGTCCAGAGATGGNAGGAATACTTCT
GAGCCATGAATTTTTTTCCCTTAAACAAGAAAGAAAATCCGTCTAATAAC
TACCTATCGGATACTGGGGTCGGGATGGGAGAAATTTTCGAAGCTATATG
CC
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