EY702926

Overview
NameEY702926
Unique NameEY702926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB8_DANRE (ATP-binding cassette sub-family B member 8, mitochondrial OS=Danio rerio GN=abcb8 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.332e-45
Identity = 101/197 (51.27%), Postives = 134/197 (68.02%), Query Frame = 1
Query:   19 YPSLSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLH-RKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKERLFSL*PIDYQLSKVQ 606
            YP+   + +LK  +L L     +A VG SGGGKST+A L+ERFYDP  G ++L+G+ +  +    L    I  +SQEPVLF  S+ ENI +G    A+ A++ +AAK ANAH+FI+ F + Y T VGERGV LSGGQKQR+AIARAL+ NP IL+LDEATSALDAESE +VQ+A+D     R   +  I ++LS +Q
Sbjct:  479 YPTRPGNQILKHFSLTLPPCKTVAIVGESGGGKSTVAALLERFYDPSSGVVMLDGLDIRTLDPSWLRGHVIGFISQEPVLFGTSVMENIRFG-KPSATDAEVVSAAKQANAHNFITGFADGYNTVVGERGVTLSGGQKQRIAIARALVKNPSILILDEATSALDAESERVVQEALDRATTGRTVLI--IAHRLSTIQ 672          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_BURCA (Lipid A export ATP-binding/permease protein msbA OS=Burkholderia cenocepacia (strain AU 1054) GN=msbA PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.015e-44
Identity = 81/172 (47.09%), Postives = 114/172 (66.28%), Query Frame = 1
Query:   46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            L  I+ K+  G  IA  GPSG GK+T+ NL+ RF+DP  G IL++GVP+ +     L  ++++VSQ+ VLFN +I  N+AYG       A ++ A + AN  D ++  P+   T VG  G+RLSGGQ+QR+AIARA+  +  IL+LDEATSALD+ESE  VQ A++ LM+ R
Sbjct:  369 LDRISFKVAPGEMIALAGPSGSGKTTLVNLLPRFFDPTDGTILVDGVPVSDYDLHALRSQMAMVSQDVVLFNDTIAANVAYG--QTPDRARVQAALEAANLADAVAAMPDGLDTLVGGNGMRLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALERLMEGR 538          

HSP 2 Score: 52.373 bits (124), Expect = 1.015e-44
Identity = 23/39 (58.97%), Postives = 32/39 (82.05%), Query Frame = 3
Query:  552 EGKTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            EG+T LVIAHRLST++ AD + V+  G+IVE G+H++LL
Sbjct:  536 EGRTTLVIAHRLSTIERADRILVLEAGKIVEEGSHDELL 574          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_XANOR (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae GN=msbA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.016e-44
Identity = 86/184 (46.74%), Postives = 120/184 (65.22%), Query Frame = 1
Query:   10 TRPYPSLSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            T  YP   N   L  ++     G+  A VG SG GKS++  LI RFYD   G+ILL+G P+   +   L R+I++V Q+ +LF+ SI EN+A+G    A ++ +E A   ANA +F++  PE  Q+ VG +G RLSGGQ+QR+AIARA++ +  IL+LDEAT+ALD ESE LVQDA+  LM +R
Sbjct:  352 TARYPGQVNP-ALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSIAENVAFGEMRSADASQLERAILGANAMEFVAQLPEGLQSHVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDR 534          

HSP 2 Score: 49.2914 bits (116), Expect = 1.016e-44
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T LVIAHRLST++ AD V V+  G IVE GTH +LL
Sbjct:  534 RTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHELL 570          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_XANOM (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=msbA PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.016e-44
Identity = 86/184 (46.74%), Postives = 120/184 (65.22%), Query Frame = 1
Query:   10 TRPYPSLSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            T  YP   N   L  ++     G+  A VG SG GKS++  LI RFYD   G+ILL+G P+   +   L R+I++V Q+ +LF+ SI EN+A+G    A ++ +E A   ANA +F++  PE  Q+ VG +G RLSGGQ+QR+AIARA++ +  IL+LDEAT+ALD ESE LVQDA+  LM +R
Sbjct:  352 TARYPGQVNP-ALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSIAENVAFGEMRSADASQLERAILGANAMEFVAQLPEGLQSHVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDR 534          

HSP 2 Score: 49.2914 bits (116), Expect = 1.016e-44
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T LVIAHRLST++ AD V V+  G IVE GTH +LL
Sbjct:  534 RTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHELL 570          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB7_MOUSE (ATP-binding cassette sub-family B member 7, mitochondrial OS=Mus musculus GN=Abcb7 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.807e-44
Identity = 83/178 (46.63%), Postives = 117/178 (65.73%), Query Frame = 1
Query:   28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            +    VL G++ ++ +G K+A VG SG GKSTI  L+ RFY+P KG I L G  L ++S E L R + +V Q+ VLF+ +I  N+ YG +  AS  ++   AK+A  HD I   P  Y T VGERG++LSGG+KQRVAIARA++ NP ++L DEATS+LD+ +E  +  AM  ++K R
Sbjct:  482 IEGQKVLNGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNLQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG-NINASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKNPPVILYDEATSSLDSITEETILGAMRDVVKHR 658          

HSP 2 Score: 42.743 bits (99), Expect = 3.807e-44
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T + IAHRLSTV  AD + V+S G++ E GTH  LL
Sbjct:  658 RTSIFIAHRLSTVVDADEIIVLSQGKVAERGTHYGLL 694          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: YKNU_BACSU (Uncharacterized ABC transporter ATP-binding protein yknU OS=Bacillus subtilis GN=yknU PE=3 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 3.817e-44
Identity = 79/172 (45.93%), Postives = 114/172 (66.28%), Query Frame = 1
Query:   46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            L  ++ +  SG  I  +GP+G GKS++  L+ RFY P+ G I ++  P+ + S + L   I +V QE  LF+ +I  NI+YG    AS  D+  AAK A AH+FI   P+ Y T +GERG+ LSGGQKQR+AIARA+ +NP IL+LD+ATSA+D ++E+ +Q A+  +MK R
Sbjct:  352 LCNVSFEANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITIDHKPITDYSLKTLRSNIGVVLQESFLFSSTIRSNISYGRPD-ASMEDVIEAAKRAQAHNFIMELPDGYDTMLGERGMGLSGGQKQRIAIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNR 522          

HSP 2 Score: 43.5134 bits (101), Expect = 3.817e-44
Identity = 19/55 (34.55%), Postives = 34/55 (61.82%), Query Frame = 3
Query:  552 EGKTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL-----YKVVFNCHYEE 701
            + +T  ++AHR+S+++ AD + V + G I E GTH +LL     YK +++  Y +
Sbjct:  520 KNRTTFIVAHRISSLKHADEILVFNKGRIRERGTHHELLEKGGYYKKIYDLQYRD 574          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_COXBU (Lipid A export ATP-binding/permease protein msbA OS=Coxiella burnetii GN=msbA PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 8.446e-44
Identity = 81/176 (46.02%), Postives = 107/176 (60.80%), Query Frame = 1
Query:   31 SNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKE 558
            S   +L  I+  +  G  +A VG SG GKST+ NL+ RFYD   G I ++ + + E   + L  +  +VSQ   LFN +I  NIAYG  G      I  AA+ A+A +FI   PE   T +GE GVRLSGGQ+QR+AIARAL  N  I +LDEATS+LD  SE  +Q A+D+LM +
Sbjct:  351 SKKTILSEISFSIEPGQMVAIVGRSGAGKSTLINLLPRFYDASTGVIKIDDINIKEFRLQELRNQFGLVSQHTTLFNDTILNNIAYGQAGSIDKRKIIEAARAAHAMEFIEQLPEGLDTVIGENGVRLSGGQRQRIAIARALFKNAPIHILDEATSSLDTHSERHIQAALDNLMDQ 526          

HSP 2 Score: 48.521 bits (114), Expect = 8.446e-44
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 3
Query:  561 TVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            T LVIAHRLST++ AD + V+ +G ++E GTH++LL
Sbjct:  528 TTLVIAHRLSTIERADWIMVLEEGRLIEKGTHQQLL 563          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_XANC5 (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=msbA PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.101e-43
Identity = 83/184 (45.11%), Postives = 119/184 (64.67%), Query Frame = 1
Query:   10 TRPYPSLSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            T  YP   N   L  ++     G+  A VG SG GKS++  LI RFY+   G+ILL+G P+   +   L R+I++V Q+ +LF+ SI +N+A+G    A +  +E A   ANA +F++  PE  Q+ VG +G RLSGGQ+QR+AIARA++ +  +L+LDEAT+ALD ESE LVQDA+  LM +R
Sbjct:  352 TARYPGQVNP-ALADVSFVAQPGTVTAIVGRSGSGKSSLIKLIPRFYEAEAGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSIADNVAFGEMRNADAGQLERAILGANAMEFVAQLPEGLQSHVGTKGGRLSGGQRQRLAIARAMLKDAPVLILDEATAALDNESERLVQDALHKLMPDR 534          

HSP 2 Score: 49.2914 bits (116), Expect = 1.101e-43
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T LVIAHRLST++ AD V V+  G IVE GTH +LL
Sbjct:  534 RTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHQLL 570          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_WIGBR (Lipid A export ATP-binding/permease protein msbA OS=Wigglesworthia glossinidia brevipalpis GN=msbA PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.101e-43
Identity = 89/184 (48.37%), Postives = 112/184 (60.87%), Query Frame = 1
Query:   10 TRPYPSLSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            T  YP   N   LK I +K+ +G  +A +G SG GKSTI NL+ RFY+  KG I L+ + L +    +L  +I++VSQ   LFN +I  NIAY      S   IE AA MA A DFI        T +GE G  LSGGQ+QR+AIARAL+ +  IL+LDEATSALD ESE  VQ A+D + K R
Sbjct:  347 TFTYPGKENPS-LKDINIKISAGCTVALIGSSGAGKSTIVNLLTRFYEADKGSIFLDNINLKKYKLSNLRNQIALVSQNIYLFNDTIANNIAYAKKKIYSKYQIEKAAYMAYAMDFIIKMKHGLNTIIGENGTLLSGGQRQRIAIARALLRDCPILILDEATSALDIESEIKVQKAIDKIRKNR 529          

HSP 2 Score: 44.2838 bits (103), Expect = 1.101e-43
Identity = 18/41 (43.90%), Postives = 30/41 (73.17%), Query Frame = 3
Query:  552 EGKTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674
            + +T LVIAHR+ST++ +D + +V  G+I+E G H +L+ K
Sbjct:  527 KNRTSLVIAHRISTIKKSDMILLVEKGKIIEYGNHNELIEK 567          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ATM1_SCHPO (Iron-sulfur clusters transporter atm1, mitochondrial OS=Schizosaccharomyces pombe GN=atm1 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.432e-43
Identity = 84/174 (48.28%), Postives = 115/174 (66.09%), Query Frame = 1
Query:   34 NHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMK 555
            N  +L G +  + +G+K+A VG SG GKSTI  L+ RFYD   GKIL++   L +I+   L + I +V Q+  LFN +I  NI YG + KAS+ +I  AAK A  HD I +FPE YQT VGERG+ +SGG+KQR+A++R L+ NP IL  DEATSALD  +E  +   ++ L+K
Sbjct:  455 NRPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTDSGKILIDNQRLDQITLNSLRKAIGVVPQDTPLFNDTILYNIGYG-NPKASNDEIVEAAKKAKIHDIIESFPEGYQTKVGERGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLIK 627          

HSP 2 Score: 42.743 bits (99), Expect = 1.432e-43
Identity = 18/39 (46.15%), Postives = 27/39 (69.23%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674
            KT + IAHRL T++  D + V+  G +VE G+HE+L+ K
Sbjct:  631 KTSVFIAHRLRTIKDCDIIFVLEKGRVVEQGSHEQLMAK 669          
The following BLAST results are available for this feature:
BLAST of EY702926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ABCB8_DANRE8.332e-4551.27ATP-binding cassette sub-family B member 8, mitoch... [more]
MSBA_BURCA1.015e-4447.09Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_XANOR1.016e-4446.74Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_XANOM1.016e-4446.74Lipid A export ATP-binding/permease protein msbA O... [more]
ABCB7_MOUSE3.807e-4446.63ATP-binding cassette sub-family B member 7, mitoch... [more]
YKNU_BACSU3.817e-4445.93Uncharacterized ABC transporter ATP-binding protei... [more]
MSBA_COXBU8.446e-4446.02Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_XANC51.101e-4345.11Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_WIGBR1.101e-4348.37Lipid A export ATP-binding/permease protein msbA O... [more]
ATM1_SCHPO1.432e-4348.28Iron-sulfur clusters transporter atm1, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702926 ID=EY702926; Name=EY702926; organism=Citrus sinensis; type=EST; length=935bp
TTCACAAACACGCGTCCGTATCCATCCCTTTCCAACCATATGGTGCTGAA
GGGCATAACACTAAAACTGCTGTCTGGCTCAAAAATTGCTCCTGTTGGTC
CTAGCGGTGGGGGAAAAAGCACAATAGCGAACTTGATAGAAAGGTTTTAC
GATCCAATTAAGGGAAAAATCCTGTTGAATGGGGTTCCTTTGGTAGAAAT
ATCTCATGAACATCTGCACAGAAAGATCAGTATAGTGAGCCAAGAGCCAG
TTCTATTCAATTGTTCCATAGAGGAGAACATAGCGTATGGATGTGATGGC
AAAGCAAGCAGTGCTGACATCGAAAATGCAGCGAAAATGGCCAACGCACA
CGATTTCATTTCAAACTTCCCAGAAAAATATCAAACTTTTGTTGGAGAAC
GTGGGGTTAGGCTTTCTGGAGGACAAAAGCAGAGAGTAGCAATTGCCAGA
GCCCTGATGATGAACCCAAGAATTCTCCTCCTGGATGAAGCCACAAGTGC
CCTGGATGCTGAAAGCGAGTACCTGGTGCAGGACGCCATGGATTCTCTTA
TGAAGGAAAGACTGTTCTCGTTATAGCCCATCGACTATCAACTGTCCAAA
GTGCAGACACCGTAGCTGTTGTTTCTGATGGTGAAATTGTTGAAAGTGGC
ACTCATGAAAAGCTCCTTTACAAAGTGGTGTTTAACTGCCACTATGAAGA
GACAACTCCGGGACCTCAAAATTGAATCTAATTCTAAAACCAACAACCAT
GGATAACTAAGTTCTTGAAATGGAAATTCATAAATAATACCACTGCCTCC
TTTTAATATCCAATTGTTTTTCCTCCCCTTCTGTGGGGCCAAAAATTCTC
CCTAGTATAGCCCTTTAACCATTATTAGCCACATTTAATTTAGGACTTCC
TAAAAACCTTTCCTTGCTTTCCTCTAAAATATTTC
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