EY702926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_XANAC (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas axonopodis pv. citri GN=msbA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.434e-43 Identity = 83/184 (45.11%), Postives = 119/184 (64.67%), Query Frame = 1 Query: 10 TRPYPSLSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 T YP N L ++ G+ A VG SG GKS++ LI RFY+ G+ILL+G P+ + L R+I++V Q+ +LF+ SI +N+A+G A + +E A ANA +F++ PE Q+ VG +G RLSGGQ+QR+AIARA++ + +L+LDEAT+ALD ESE LVQDA+ LM +R Sbjct: 352 TARYPGQVNP-ALADVSFVAQPGTVTAIVGRSGSGKSSLIKLIPRFYEAEAGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSIADNVAFGEMRNADAGKLERAILGANAMEFVAQLPEGLQSHVGTKGGRLSGGQRQRLAIARAMLKDAPVLILDEATAALDNESERLVQDALHKLMPDR 534 HSP 2 Score: 49.2914 bits (116), Expect = 1.434e-43 Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668 +T LVIAHRLST++ AD V V+ G IVE GTH +LL Sbjct: 534 RTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHQLL 570
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_MOUSE (ATP-binding cassette sub-family B member 6, mitochondrial OS=Mus musculus GN=Abcb6 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.427e-43 Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = 1 Query: 46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 L+ ++ ++ G +A VGPSG GKSTI L+ RFYD G I ++G + +++ L I +V Q+ VLFN +I NI YG A +++E AA+ A HD I +FPE Y+T VGERG++LSGG+KQRVAIAR ++ P I+LLDEATSALD +E +Q ++ + R Sbjct: 606 LQDVSFTVMPGQTVALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTIANNIRYG-RVTAGDSEVEAAAQAAGIHDAILSFPEGYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCTNR 776 HSP 2 Score: 47.7506 bits (112), Expect = 2.427e-43 Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668 +T +VIAHRLSTV +AD + V+ DG I+E G HE LL Sbjct: 776 RTTIVIAHRLSTVVNADQILVIKDGCIIERGRHEALL 812
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB7_HUMAN (ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABCB7 PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 2.429e-43 Identity = 82/178 (46.07%), Postives = 117/178 (65.73%), Query Frame = 1 Query: 28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 + VL GI+ ++ +G K+A VG SG GKSTI L+ RFY+P KG I L G + ++S E L R + +V Q+ VLF+ +I N+ YG + AS ++ AK+A HD I P Y T VGERG++LSGG+KQRVAIARA++ +P ++L DEATS+LD+ +E + AM ++K R Sbjct: 482 IEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG-NISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHR 658 HSP 2 Score: 41.9726 bits (97), Expect = 2.429e-43 Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668 +T + IAHRLSTV AD + V+ G++ E GTH LL Sbjct: 658 RTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLL 694
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB7_RAT (ATP-binding cassette sub-family B member 7, mitochondrial OS=Rattus norvegicus GN=Abcb7 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.429e-43 Identity = 81/178 (45.51%), Postives = 117/178 (65.73%), Query Frame = 1 Query: 28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 + VL G++ ++ +G K+A VG SG GKSTI L+ RFY+P KG I L G + ++S E L R + +V Q+ VLF+ +I N+ YG + AS ++ AK+A HD I P Y T VGERG++LSGG+KQRVAIARA++ +P ++L DEATS+LD+ +E + AM ++K R Sbjct: 482 IEGQKVLSGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG-NINASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMRDVVKHR 658 HSP 2 Score: 42.743 bits (99), Expect = 2.429e-43 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668 +T + IAHRLSTV AD + V+S G++ E GTH LL Sbjct: 658 RTSIFIAHRLSTVVDADEIIVLSQGKVAERGTHYGLL 694
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: AB24B_ARATH (ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana GN=ABCB24 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.169e-43 Identity = 82/178 (46.07%), Postives = 114/178 (64.04%), Query Frame = 1 Query: 28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 L +L GI+ ++ +G +A VG SG GKSTI +I RF+D G + ++G + E+ E L I +V Q+ VLFN +I NI YG + A+ ++ NAA+ A HD I FP+KY T VGERG+ LSGG+KQRVA+ARA + +P ILL DEATSALD+++E + + SL R Sbjct: 449 LPERKILDGISFEVPAGKSVAIVGSSGSGKSTILRMIFRFFDVDSGNVKIDGQDIKEVRLESLRSSIGVVPQDTVLFNDTIFHNIHYG-NLSATEEEVYNAARRAAIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLASNR 625 HSP 2 Score: 43.1282 bits (100), Expect = 3.169e-43 Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674 +T + IAHRL+T D + V+ G++VE GTHE LL K Sbjct: 625 RTCIFIAHRLTTAMQCDEILVMEKGKVVEKGTHEVLLGK 663
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA1_COLP3 (Lipid A export ATP-binding/permease protein msbA 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=msbA1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.173e-43 Identity = 80/174 (45.98%), Postives = 114/174 (65.52%), Query Frame = 1 Query: 40 MVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 + L IT L G +A VG SG GKST ++L+ RFYD +G+IL++ + + + L ++ S VSQ+ VLFN ++ NIAYG +A+ A+I AAK A+ +F + + +T +GE G LSGGQ+QRVAIARAL+ + L+LDEATSALD ESE +QDA+ +L + R Sbjct: 379 LALNDITFDLAPGETLALVGRSGSGKSTASSLLLRFYDATRGEILIDDTNIEQFQLKDLRKQFSYVSQQVVLFNDTLANNIAYG-KPEATEAEIIEAAKSAHVMEFAEHMEQGLETNIGENGALLSGGQRQRVAIARALLCDTPFLILDEATSALDTESERHIQDALQTLQQNR 551 HSP 2 Score: 49.2914 bits (116), Expect = 3.173e-43 Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 3 Query: 552 EGKTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674 + +T +VIAHRLST+++AD + V+ G+IVE G H+ LL K Sbjct: 549 QNRTSIVIAHRLSTIENADKIIVMEQGKIVEQGNHQSLLAK 589
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 4.120e-43 Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = 1 Query: 46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 L+ ++ ++ G +A VGPSG GKSTI L+ RFYD G I ++G + +++ L I +V Q+ VLFN +I +NI YG A + ++E AA+ A HD I FPE Y+T VGERG++LSGG+KQRVAIAR ++ P I+LLDEATSALD +E +Q ++ + R Sbjct: 606 LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYG-RVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 776 HSP 2 Score: 47.7506 bits (112), Expect = 4.120e-43 Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668 +T +V+AHRLSTV +AD + V+ DG IVE G HE LL Sbjct: 776 RTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALL 812
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_RAT (ATP-binding cassette sub-family B member 6, mitochondrial OS=Rattus norvegicus GN=Abcb6 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.370e-43 Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = 1 Query: 46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 L+ ++ ++ G +A VGPSG GKSTI L+ RFYD G I ++G + +++ L I +V Q+ VLFN +I NI YG A ++I+ AA+ A HD I +FPE Y+T VGERG++LSGG+KQRVAIAR ++ P I+LLDEATSALD +E +Q ++ + R Sbjct: 606 LQDVSFTVMPGQTVALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTIANNIRYG-RVTAGDSEIQAAAQAAGIHDAILSFPEGYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCTNR 776 HSP 2 Score: 47.3654 bits (111), Expect = 5.370e-43 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668 +T +V+AHRLSTV +AD + V+ DG I+E G HE LL Sbjct: 776 RTTIVVAHRLSTVVNADQILVIKDGCIIERGRHEALL 812
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: Y4GM_RHISN (Uncharacterized ABC transporter ATP-binding protein y4gM OS=Rhizobium sp. (strain NGR234) GN=NGR_a03510 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.389e-43 Identity = 81/173 (46.82%), Postives = 113/173 (65.32%), Query Frame = 1 Query: 43 VLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 + + + + +G A VGPSG GKS+I NLI R YDP G + ++G L +++ L +I V Q+ LF+ +I+ NI+ G +G AS +I AAK ANAHDFI P Y T VGE G++LSGGQKQR+ IARA++ N IL+ DEATSALD+ESE ++ A+ L ++R Sbjct: 361 LFQNLNVTFPAGKTTALVGPSGAGKSSIINLIMRLYDPDVGSVTVDGHDLKDVTFRSLRDRIGFVGQDTFLFSGTIKYNISLGREG-ASDEEIIEAAKTANAHDFIMKMPHGYDTEVGENGIKLSGGQKQRITIARAMLRNAEILIFDEATSALDSESEIQIRQALARLTRKR 532 HSP 2 Score: 40.817 bits (94), Expect = 5.389e-43 Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668 +T ++IAHRLSTV +AD + V+ G++ E G +LL Sbjct: 532 RTTIMIAHRLSTVTAADNIVVMEGGQVAEQGPQGRLL 568
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_XENTR (ATP-binding cassette sub-family B member 6, mitochondrial OS=Xenopus tropicalis GN=abcb6 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 6.996e-43 Identity = 80/178 (44.94%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561 L +L+ I+ ++ G IA VGPSG GKSTI L+ RFYD G I ++G + + E L I +V Q+ VLFN +I NI YG A+ ++E AA A+ H+ I +F + Y T GERG++LSGG+KQRVAIAR ++ P+I+LLDEATSALD E+E +Q ++ + R Sbjct: 591 LDGKEILRDISFTVMPGQSIALVGPSGSGKSTIIRLLFRFYDVKGGTIKVDGQDISTVRQESLRSHIGVVPQDTVLFNDTIRNNIRYG-RVSATDDEVEEAAAAADIHERILSFRDGYDTQTGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSALDTETERNIQASLAKVCANR 767 HSP 2 Score: 48.521 bits (114), Expect = 6.996e-43 Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 3 Query: 558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674 +T +V+AHRLSTV ++D + V+ +G+IVE G HE+LL K Sbjct: 767 RTTIVVAHRLSTVINSDQILVLKEGQIVERGRHEELLLK 805 The following BLAST results are available for this feature:
BLAST of EY702926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702926 ID=EY702926; Name=EY702926; organism=Citrus sinensis; type=EST; length=935bpback to top |