EY702926

Overview
NameEY702926
Unique NameEY702926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA_XANAC (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas axonopodis pv. citri GN=msbA PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.434e-43
Identity = 83/184 (45.11%), Postives = 119/184 (64.67%), Query Frame = 1
Query:   10 TRPYPSLSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            T  YP   N   L  ++     G+  A VG SG GKS++  LI RFY+   G+ILL+G P+   +   L R+I++V Q+ +LF+ SI +N+A+G    A +  +E A   ANA +F++  PE  Q+ VG +G RLSGGQ+QR+AIARA++ +  +L+LDEAT+ALD ESE LVQDA+  LM +R
Sbjct:  352 TARYPGQVNP-ALADVSFVAQPGTVTAIVGRSGSGKSSLIKLIPRFYEAEAGQILLDGHPVQAYALADLRRQIALVGQQVMLFDGSIADNVAFGEMRNADAGKLERAILGANAMEFVAQLPEGLQSHVGTKGGRLSGGQRQRLAIARAMLKDAPVLILDEATAALDNESERLVQDALHKLMPDR 534          

HSP 2 Score: 49.2914 bits (116), Expect = 1.434e-43
Identity = 23/37 (62.16%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T LVIAHRLST++ AD V V+  G IVE GTH +LL
Sbjct:  534 RTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHQLL 570          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_MOUSE (ATP-binding cassette sub-family B member 6, mitochondrial OS=Mus musculus GN=Abcb6 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.427e-43
Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = 1
Query:   46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            L+ ++  ++ G  +A VGPSG GKSTI  L+ RFYD   G I ++G  + +++   L   I +V Q+ VLFN +I  NI YG    A  +++E AA+ A  HD I +FPE Y+T VGERG++LSGG+KQRVAIAR ++  P I+LLDEATSALD  +E  +Q ++  +   R
Sbjct:  606 LQDVSFTVMPGQTVALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTIANNIRYG-RVTAGDSEVEAAAQAAGIHDAILSFPEGYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCTNR 776          

HSP 2 Score: 47.7506 bits (112), Expect = 2.427e-43
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T +VIAHRLSTV +AD + V+ DG I+E G HE LL
Sbjct:  776 RTTIVIAHRLSTVVNADQILVIKDGCIIERGRHEALL 812          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB7_HUMAN (ATP-binding cassette sub-family B member 7, mitochondrial OS=Homo sapiens GN=ABCB7 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.429e-43
Identity = 82/178 (46.07%), Postives = 117/178 (65.73%), Query Frame = 1
Query:   28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            +    VL GI+ ++ +G K+A VG SG GKSTI  L+ RFY+P KG I L G  + ++S E L R + +V Q+ VLF+ +I  N+ YG +  AS  ++   AK+A  HD I   P  Y T VGERG++LSGG+KQRVAIARA++ +P ++L DEATS+LD+ +E  +  AM  ++K R
Sbjct:  482 IEGQKVLSGISFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG-NISASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMKDVVKHR 658          

HSP 2 Score: 41.9726 bits (97), Expect = 2.429e-43
Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T + IAHRLSTV  AD + V+  G++ E GTH  LL
Sbjct:  658 RTSIFIAHRLSTVVDADEIIVLDQGKVAERGTHHGLL 694          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB7_RAT (ATP-binding cassette sub-family B member 7, mitochondrial OS=Rattus norvegicus GN=Abcb7 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.429e-43
Identity = 81/178 (45.51%), Postives = 117/178 (65.73%), Query Frame = 1
Query:   28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            +    VL G++ ++ +G K+A VG SG GKSTI  L+ RFY+P KG I L G  + ++S E L R + +V Q+ VLF+ +I  N+ YG +  AS  ++   AK+A  HD I   P  Y T VGERG++LSGG+KQRVAIARA++ +P ++L DEATS+LD+ +E  +  AM  ++K R
Sbjct:  482 IEGQKVLSGVSFEVPAGKKVAIVGGSGSGKSTIVRLLFRFYEPQKGSIYLAGQNIQDVSLESLRRAVGVVPQDAVLFHNTIYYNLLYG-NINASPEEVYAVAKLAGLHDAILRMPHGYDTQVGERGLKLSGGEKQRVAIARAILKDPPVILYDEATSSLDSITEETILGAMRDVVKHR 658          

HSP 2 Score: 42.743 bits (99), Expect = 2.429e-43
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T + IAHRLSTV  AD + V+S G++ E GTH  LL
Sbjct:  658 RTSIFIAHRLSTVVDADEIIVLSQGKVAERGTHYGLL 694          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: AB24B_ARATH (ABC transporter B family member 24, mitochondrial OS=Arabidopsis thaliana GN=ABCB24 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.169e-43
Identity = 82/178 (46.07%), Postives = 114/178 (64.04%), Query Frame = 1
Query:   28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            L    +L GI+ ++ +G  +A VG SG GKSTI  +I RF+D   G + ++G  + E+  E L   I +V Q+ VLFN +I  NI YG +  A+  ++ NAA+ A  HD I  FP+KY T VGERG+ LSGG+KQRVA+ARA + +P ILL DEATSALD+++E  +   + SL   R
Sbjct:  449 LPERKILDGISFEVPAGKSVAIVGSSGSGKSTILRMIFRFFDVDSGNVKIDGQDIKEVRLESLRSSIGVVPQDTVLFNDTIFHNIHYG-NLSATEEEVYNAARRAAIHDTIMKFPDKYSTAVGERGLMLSGGEKQRVALARAFLKSPAILLCDEATSALDSKTEAEIMKTLRSLASNR 625          

HSP 2 Score: 43.1282 bits (100), Expect = 3.169e-43
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674
            +T + IAHRL+T    D + V+  G++VE GTHE LL K
Sbjct:  625 RTCIFIAHRLTTAMQCDEILVMEKGKVVEKGTHEVLLGK 663          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: MSBA1_COLP3 (Lipid A export ATP-binding/permease protein msbA 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=msbA1 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.173e-43
Identity = 80/174 (45.98%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   40 MVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            + L  IT  L  G  +A VG SG GKST ++L+ RFYD  +G+IL++   + +   + L ++ S VSQ+ VLFN ++  NIAYG   +A+ A+I  AAK A+  +F  +  +  +T +GE G  LSGGQ+QRVAIARAL+ +   L+LDEATSALD ESE  +QDA+ +L + R
Sbjct:  379 LALNDITFDLAPGETLALVGRSGSGKSTASSLLLRFYDATRGEILIDDTNIEQFQLKDLRKQFSYVSQQVVLFNDTLANNIAYG-KPEATEAEIIEAAKSAHVMEFAEHMEQGLETNIGENGALLSGGQRQRVAIARALLCDTPFLILDEATSALDTESERHIQDALQTLQQNR 551          

HSP 2 Score: 49.2914 bits (116), Expect = 3.173e-43
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 3
Query:  552 EGKTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674
            + +T +VIAHRLST+++AD + V+  G+IVE G H+ LL K
Sbjct:  549 QNRTSIVIAHRLSTIENADKIIVMEQGKIVEQGNHQSLLAK 589          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.120e-43
Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = 1
Query:   46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            L+ ++  ++ G  +A VGPSG GKSTI  L+ RFYD   G I ++G  + +++   L   I +V Q+ VLFN +I +NI YG    A + ++E AA+ A  HD I  FPE Y+T VGERG++LSGG+KQRVAIAR ++  P I+LLDEATSALD  +E  +Q ++  +   R
Sbjct:  606 LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYG-RVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 776          

HSP 2 Score: 47.7506 bits (112), Expect = 4.120e-43
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T +V+AHRLSTV +AD + V+ DG IVE G HE LL
Sbjct:  776 RTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALL 812          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_RAT (ATP-binding cassette sub-family B member 6, mitochondrial OS=Rattus norvegicus GN=Abcb6 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 5.370e-43
Identity = 79/172 (45.93%), Postives = 112/172 (65.12%), Query Frame = 1
Query:   46 LKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            L+ ++  ++ G  +A VGPSG GKSTI  L+ RFYD   G I ++G  + +++   L   I +V Q+ VLFN +I  NI YG    A  ++I+ AA+ A  HD I +FPE Y+T VGERG++LSGG+KQRVAIAR ++  P I+LLDEATSALD  +E  +Q ++  +   R
Sbjct:  606 LQDVSFTVMPGQTVALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTIANNIRYG-RVTAGDSEIQAAAQAAGIHDAILSFPEGYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQASLAKVCTNR 776          

HSP 2 Score: 47.3654 bits (111), Expect = 5.370e-43
Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T +V+AHRLSTV +AD + V+ DG I+E G HE LL
Sbjct:  776 RTTIVVAHRLSTVVNADQILVIKDGCIIERGRHEALL 812          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: Y4GM_RHISN (Uncharacterized ABC transporter ATP-binding protein y4gM OS=Rhizobium sp. (strain NGR234) GN=NGR_a03510 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 5.389e-43
Identity = 81/173 (46.82%), Postives = 113/173 (65.32%), Query Frame = 1
Query:   43 VLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            + + + +   +G   A VGPSG GKS+I NLI R YDP  G + ++G  L +++   L  +I  V Q+  LF+ +I+ NI+ G +G AS  +I  AAK ANAHDFI   P  Y T VGE G++LSGGQKQR+ IARA++ N  IL+ DEATSALD+ESE  ++ A+  L ++R
Sbjct:  361 LFQNLNVTFPAGKTTALVGPSGAGKSSIINLIMRLYDPDVGSVTVDGHDLKDVTFRSLRDRIGFVGQDTFLFSGTIKYNISLGREG-ASDEEIIEAAKTANAHDFIMKMPHGYDTEVGENGIKLSGGQKQRITIARAMLRNAEILIFDEATSALDSESEIQIRQALARLTRKR 532          

HSP 2 Score: 40.817 bits (94), Expect = 5.389e-43
Identity = 17/37 (45.95%), Postives = 26/37 (70.27%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLL 668
            +T ++IAHRLSTV +AD + V+  G++ E G   +LL
Sbjct:  532 RTTIMIAHRLSTVTAADNIVVMEGGQVAEQGPQGRLL 568          
BLAST of EY702926 vs. ExPASy Swiss-Prot
Match: ABCB6_XENTR (ATP-binding cassette sub-family B member 6, mitochondrial OS=Xenopus tropicalis GN=abcb6 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 6.996e-43
Identity = 80/178 (44.94%), Postives = 112/178 (62.92%), Query Frame = 1
Query:   28 LSNHMVLKGITLKLLSGSKIAPVGPSGGGKSTIANLIERFYDPIKGKILLNGVPLVEISHEHLHRKISIVSQEPVLFNCSIEENIAYGCDGKASSADIENAAKMANAHDFISNFPEKYQTFVGERGVRLSGGQKQRVAIARALMMNPRILLLDEATSALDAESEYLVQDAMDSLMKER 561
            L    +L+ I+  ++ G  IA VGPSG GKSTI  L+ RFYD   G I ++G  +  +  E L   I +V Q+ VLFN +I  NI YG    A+  ++E AA  A+ H+ I +F + Y T  GERG++LSGG+KQRVAIAR ++  P+I+LLDEATSALD E+E  +Q ++  +   R
Sbjct:  591 LDGKEILRDISFTVMPGQSIALVGPSGSGKSTIIRLLFRFYDVKGGTIKVDGQDISTVRQESLRSHIGVVPQDTVLFNDTIRNNIRYG-RVSATDDEVEEAAAAADIHERILSFRDGYDTQTGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSALDTETERNIQASLAKVCANR 767          

HSP 2 Score: 48.521 bits (114), Expect = 6.996e-43
Identity = 21/39 (53.85%), Postives = 31/39 (79.49%), Query Frame = 3
Query:  558 KTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEKLLYK 674
            +T +V+AHRLSTV ++D + V+ +G+IVE G HE+LL K
Sbjct:  767 RTTIVVAHRLSTVINSDQILVLKEGQIVERGRHEELLLK 805          
The following BLAST results are available for this feature:
BLAST of EY702926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MSBA_XANAC1.434e-4345.11Lipid A export ATP-binding/permease protein msbA O... [more]
ABCB6_MOUSE2.427e-4345.93ATP-binding cassette sub-family B member 6, mitoch... [more]
ABCB7_HUMAN2.429e-4346.07ATP-binding cassette sub-family B member 7, mitoch... [more]
ABCB7_RAT2.429e-4345.51ATP-binding cassette sub-family B member 7, mitoch... [more]
AB24B_ARATH3.169e-4346.07ABC transporter B family member 24, mitochondrial ... [more]
MSBA1_COLP33.173e-4345.98Lipid A export ATP-binding/permease protein msbA 1... [more]
ABCB6_HUMAN4.120e-4345.93ATP-binding cassette sub-family B member 6, mitoch... [more]
ABCB6_RAT5.370e-4345.93ATP-binding cassette sub-family B member 6, mitoch... [more]
Y4GM_RHISN5.389e-4346.82Uncharacterized ABC transporter ATP-binding protei... [more]
ABCB6_XENTR6.996e-4344.94ATP-binding cassette sub-family B member 6, mitoch... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-H01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702926 ID=EY702926; Name=EY702926; organism=Citrus sinensis; type=EST; length=935bp
TTCACAAACACGCGTCCGTATCCATCCCTTTCCAACCATATGGTGCTGAA
GGGCATAACACTAAAACTGCTGTCTGGCTCAAAAATTGCTCCTGTTGGTC
CTAGCGGTGGGGGAAAAAGCACAATAGCGAACTTGATAGAAAGGTTTTAC
GATCCAATTAAGGGAAAAATCCTGTTGAATGGGGTTCCTTTGGTAGAAAT
ATCTCATGAACATCTGCACAGAAAGATCAGTATAGTGAGCCAAGAGCCAG
TTCTATTCAATTGTTCCATAGAGGAGAACATAGCGTATGGATGTGATGGC
AAAGCAAGCAGTGCTGACATCGAAAATGCAGCGAAAATGGCCAACGCACA
CGATTTCATTTCAAACTTCCCAGAAAAATATCAAACTTTTGTTGGAGAAC
GTGGGGTTAGGCTTTCTGGAGGACAAAAGCAGAGAGTAGCAATTGCCAGA
GCCCTGATGATGAACCCAAGAATTCTCCTCCTGGATGAAGCCACAAGTGC
CCTGGATGCTGAAAGCGAGTACCTGGTGCAGGACGCCATGGATTCTCTTA
TGAAGGAAAGACTGTTCTCGTTATAGCCCATCGACTATCAACTGTCCAAA
GTGCAGACACCGTAGCTGTTGTTTCTGATGGTGAAATTGTTGAAAGTGGC
ACTCATGAAAAGCTCCTTTACAAAGTGGTGTTTAACTGCCACTATGAAGA
GACAACTCCGGGACCTCAAAATTGAATCTAATTCTAAAACCAACAACCAT
GGATAACTAAGTTCTTGAAATGGAAATTCATAAATAATACCACTGCCTCC
TTTTAATATCCAATTGTTTTTCCTCCCCTTCTGTGGGGCCAAAAATTCTC
CCTAGTATAGCCCTTTAACCATTATTAGCCACATTTAATTTAGGACTTCC
TAAAAACCTTTCCTTGCTTTCCTCTAAAATATTTC
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