EY650120

Overview
NameEY650120
Unique NameEY650120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSEAE (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa GN=dxs PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 3 
Query:  537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH----HTTLIKSDWEKGXMRTMMQHMASLITKGLKWIDXFGPGQS 896
            E    RP TPLLD  + P  +R L   +L+ LADELR  +++ V +TGGH G+ LGV+ELT+A   +     DR+  DV H    H  L +     G +R     +A+   +     D FG G S
Sbjct:    7 EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLR-QKNGLAAFPRRAESEYDTFGVGHS 130
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSEAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 3 
Query:  537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH----HTTLIKSDWEKGXMRTMMQHMASLITKGLKWIDXFGPGQS 896
            E    RP TPLLD  + P  +R L   +L+ LADELR  +++ V +TGGH G+ LGV+ELT+A   +     DR+  DV H    H  L +     G +R     +A+   +     D FG G S
Sbjct:    7 EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLR-QKNGLAAFPRRAESEYDTFGVGHS 130
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSEA8 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 3 
Query:  537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH----HTTLIKSDWEKGXMRTMMQHMASLITKGLKWIDXFGPGQS 896
            E    RP TPLLD  + P  +R L   +L+ LADELR  +++ V +TGGH G+ LGV+ELT+A   +     DR+  DV H    H  L +     G +R     +A+   +     D FG G S
Sbjct:    7 EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLR-QKNGLAAFPRRAESEYDTFGVGHS 130
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSEA7 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 46/125 (36.80%), Postives = 64/125 (51.20%), Query Frame = 3 
Query:  537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH----HTTLIKSDWEKGXMRTMMQHMASLITKGLKWIDXFGPGQS 896
            E    RP TPLLD  + P  +R L   +L+ LADELR  +++ V +TGGH G+ LGV+ELT+A   +     DR+  DV H    H  L +     G +R     +A+   +     D FG G S
Sbjct:    7 EIPRERPATPLLDRASSPAELRRLGEADLETLADELRQYLLYTVGQTGGHFGAGLGVVELTIALHYVFDTPDDRLVWDVGHQAYPHKILTERRELMGTLR-QKDGLAAFPRRAESEYDTFGVGHS 130
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_CAUCR (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 3 
Query:  561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            TPLLDTI  P   R LS+ ELKQLA E+R++ I  VS TGGHLG+ LGV+ELTVA   +    KD +  DV H
Sbjct:    5 TPLLDTIASPADTRGLSLAELKQLAAEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVFETPKDIVIWDVGH 77
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_CAUCN (1-deoxy-D-xylulose-5-phosphate synthase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 3 
Query:  561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            TPLLDTI  P   R LS+ ELKQLA E+R++ I  VS TGGHLG+ LGV+ELTVA   +    KD +  DV H
Sbjct:    5 TPLLDTIASPADTRGLSLAELKQLAAEVRAETIDAVSVTGGHLGAGLGVVELTVALHHVFETPKDIVIWDVGH 77
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 50/119 (42.02%), Postives = 66/119 (55.46%), Query Frame = 3 
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHTTLIK-SDWEKGXMRTMMQH--MASLITKGLKWIDXFGPGQS 896
            R  TPLLD I  P  +R L   +L +LADELR++ I  VS TGGHLG+ LGV+ELTVA   + +  +DRI  DV H T   K     +  +RT+ Q   ++    +     D FG G S
Sbjct:    3 RTLTPLLDRICLPQDLRALPESDLVRLADELRTETIDAVSVTGGHLGAGLGVVELTVALHYVFNTPEDRIIWDVGHQTYPHKILTGRRDRIRTLRQEGGLSGFTKRSESVYDPFGAGHS 121
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_ACIBY (1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter baumannii (strain AYE) GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 3 
Query:  537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            E  ++RP TPLLD I++P  +R L   +L Q+ADELR  +++   ++GGH G+ LGV+ELTVA     +   DR+  DV H
Sbjct:    8 EIPTQRPVTPLLDAIDHPQQLRQLEHSQLLQVADELRQYILYAAGQSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGH 88
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_ACIBS (1-deoxy-D-xylulose-5-phosphate synthase OS=Acinetobacter baumannii (strain SDF) GN=dxs PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 3 
Query:  537 EYHSRRPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            E  ++RP TPLLD I++P  +R L   +L Q+ADELR  +++   ++GGH G+ LGV+ELTVA     +   DR+  DV H
Sbjct:    8 EIPTQRPVTPLLDAIDHPQQLRQLEHSQLLQVADELRQYILYAAGQSGGHFGANLGVVELTVALHYCFNTPNDRLVWDVGH 88
[Close]
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSYCK (1-deoxy-D-xylulose-5-phosphate synthase OS=Psychrobacter cryohalolentis (strain K5) GN=dxs PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12
Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 3 
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH----HTTLIKSDWEKGXMRTMMQHMASLITKGLKWIDXFGPGQS 896
            RP TPLLD+++ P  ++  S  EL  LADELR  V+++  ++GGH G+ LGVIELT+A   +L   +D+I  DV H    H  L     + G +R+    + +   +     D FG G S
Sbjct:   38 RPQTPLLDSVDSPADLKTFSSAELITLADELRLFVLYSAGQSGGHFGANLGVIELTIALHYLLDTPQDQIVWDVGHQAYAHKVLTGRRDQLGTIRS-KTGLTAFPERAESVYDTFGVGHS 156
The following BLAST results are available for this feature:
BLAST of EY650120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DXS_PSEAE6.707e-1236.801-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_PSEAB6.707e-1236.801-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_PSEA86.707e-1236.801-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_PSEA76.707e-1236.801-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_CAUCR6.707e-1256.161-deoxy-D-xylulose-5-phosphate synthase OS=Cauloba... [more]
DXS_CAUCN6.707e-1256.161-deoxy-D-xylulose-5-phosphate synthase OS=Cauloba... [more]
DXS_BARQU6.707e-1242.021-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]
DXS_ACIBY6.707e-1244.441-deoxy-D-xylulose-5-phosphate synthase OS=Acineto... [more]
DXS_ACIBS6.707e-1244.441-deoxy-D-xylulose-5-phosphate synthase OS=Acineto... [more]
DXS_PSYCK8.760e-1237.501-deoxy-D-xylulose-5-phosphate synthase OS=Psychro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-D11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650120 ID=EY650120; Name=EY650120; organism=Citrus sinensis; type=EST; length=897bp
CGATCAATCACAATCTACAAATTTGGGGGGTGGGGTGTAGAGCTTCATGC
CTTTAACAGACCCACTAAATTTGCCTTAAGCATTATCAACCACAAACACG
CGTTCGGATTACTTCCTTCATTCGTTTATTATATTTTTTTAATATATTCA
ATATTTATATTCAACCTACTTCACTTCAGTGGCATCCAGCACGCAGGAAG
CACTGAATACATTCACTGTGAGAAGATGACTGACCAGTCGCGAGTGTCTT
TAATTATATACTGATTTGCCGGAGTTAGCATATTATTCTTCACTCACTGC
GTGATGTTTTCTTTTCTGGGGTGTTCTATGCAATACCTGGTATGGCTCTC
TCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAACAGATTCGGGTCC
CCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAGCAGCTCTTTTTT
CCCATTTGTCACACAAGCTCGACAATCATCAGATACAGCTCAAGAAAAGG
CCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGAGTATCACTCACG
AAGACCACCGACACCTCTCTTGGACACCATAAACTATCCAATTCACATGA
GAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGATGAGTTGCGGTCC
GATGTCATATTCAATGTTTCNAAAACCGGGGGTCACTTGGGCTCAACTCT
TGGTGTGATTGAGCTTACCGTGGCCTTCATTATGTTGTCATGCTCCAAAG
ACCGGATCTGNGAGGATGTCNGTCATCACACTACCCTCATAAAATCTGAC
TGGGAGAAGGGATANATGCGTACCATGATGCAACATATGGCCTCTCTGAT
CACTAAAGGGCTGAAATGGATTGATNGCTTTGGACCGGGCCAGTCTA
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